RNA–Protein interactions for RNA: ENST00000467308.1

TSSC4-208, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

TSL 3

Gene TSSC4, Length 409 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-208ENST00000467308 TMEM209Q96SK2 561 aa16.98■□□□□ 0.31
TSSC4-208ENST00000467308 CUEDC2Q9H467 287 aa16.98■□□□□ 0.31
TSSC4-208ENST00000467308 CLSTN2Q9H4D0 955 aa16.98■□□□□ 0.31
TSSC4-208ENST00000467308 CCDC39Q9UFE4 941 aa16.98■□□□□ 0.31
TSSC4-208ENST00000467308 DSEQ9UL01 958 aa16.98■□□□□ 0.31
TSSC4-208ENST00000467308 CHD6Q8TD26 2715 aa16.98■□□□□ 0.31
TSSC4-208ENST00000467308 PPEF2O14830 753 aa16.97■□□□□ 0.31
TSSC4-208ENST00000467308 TM4SF5O14894 197 aa16.97■□□□□ 0.31
TSSC4-208ENST00000467308 HNRNPDLO14979 420 aaKnown RBP16.97■□□□□ 0.31
TSSC4-208ENST00000467308 EXTL3O43909 919 aa16.97■□□□□ 0.31
TSSC4-208ENST00000467308 ATG13O75143 517 aa16.97■□□□□ 0.31
TSSC4-208ENST00000467308 RPP40O75818 363 aaKnown RBP16.97■□□□□ 0.31
TSSC4-208ENST00000467308 AKAP3O75969 853 aa16.97■□□□□ 0.31
TSSC4-208ENST00000467308 PIGRP01833 764 aa16.97■□□□□ 0.31
TSSC4-208ENST00000467308 PLA2G4BP0C869 781 aa16.97■□□□□ 0.31
TSSC4-208ENST00000467308 RAP1GAPP47736 663 aa16.97■□□□□ 0.31
TSSC4-208ENST00000467308 SMARCB1Q12824 385 aa16.97■□□□□ 0.31
TSSC4-208ENST00000467308 CCDC183Q5T5S1 534 aa16.97■□□□□ 0.31
TSSC4-208ENST00000467308 IQUBQ8NA54 791 aa16.97■□□□□ 0.31
TSSC4-208ENST00000467308 C12orf50Q8NA57 414 aaPredicted RBP16.97■□□□□ 0.31
TSSC4-208ENST00000467308 OR10T2Q8NGX3 314 aa16.97■□□□□ 0.31
TSSC4-208ENST00000467308 C2orf15Q8WU43 125 aaKnown RBP16.97■□□□□ 0.31
TSSC4-208ENST00000467308 SEPT5Q99719 369 aaPredicted RBP16.97■□□□□ 0.31
TSSC4-208ENST00000467308 FAM83CQ9BQN1 747 aa16.97■□□□□ 0.31
TSSC4-208ENST00000467308 ZCWPW1Q9H0M4 648 aa16.97■□□□□ 0.31
TSSC4-208ENST00000467308 MAGEF1Q9HAY2 307 aa16.97■□□□□ 0.31
TSSC4-208ENST00000467308 IL21Q9HBE4 155 aa16.97■□□□□ 0.31
TSSC4-208ENST00000467308 ANGPTL2Q9UKU9 493 aa16.97■□□□□ 0.31
TSSC4-208ENST00000467308 ODF2LQ9ULJ1 636 aa16.97■□□□□ 0.31
TSSC4-208ENST00000467308 TBX20Q9UMR3 447 aa16.97■□□□□ 0.31
TSSC4-208ENST00000467308 DERAQ9Y315 318 aa16.97■□□□□ 0.31
TSSC4-208ENST00000467308 SCN1AP35498 2009 aa16.97■□□□□ 0.31
TSSC4-208ENST00000467308 ZNF638Q14966 1978 aaKnown RBP16.97■□□□□ 0.31
TSSC4-208ENST00000467308 ATG2BQ96BY7 2078 aa16.97■□□□□ 0.31
TSSC4-208ENST00000467308 A0A087X0B3 334 aa16.96■□□□□ 0.31
TSSC4-208ENST00000467308 A0A0B4J269 797 aa16.96■□□□□ 0.31
TSSC4-208ENST00000467308 PIRO00625 290 aa16.96■□□□□ 0.31
TSSC4-208ENST00000467308 AXIN1O15169 862 aa16.96■□□□□ 0.31
TSSC4-208ENST00000467308 POLR2DO15514 142 aaKnown RBP16.96■□□□□ 0.31
TSSC4-208ENST00000467308 ACTN4O43707 911 aaKnown RBP16.96■□□□□ 0.31
TSSC4-208ENST00000467308 LETM1O95202 739 aaPredicted RBP16.96■□□□□ 0.31
TSSC4-208ENST00000467308 EPN2O95208 641 aa16.96■□□□□ 0.31
TSSC4-208ENST00000467308 SLFN14P0C7P3 912 aa16.96■□□□□ 0.31
TSSC4-208ENST00000467308 ATF6P18850 670 aa16.96■□□□□ 0.31
TSSC4-208ENST00000467308 PMLP29590 882 aa16.96■□□□□ 0.31
TSSC4-208ENST00000467308 SHC2P98077 582 aa16.96■□□□□ 0.31
TSSC4-208ENST00000467308 CYP4F8P98187 520 aa16.96■□□□□ 0.31
TSSC4-208ENST00000467308 GRSF1Q12849 480 aaKnown RBP eCLIP16.96■□□□□ 0.31
TSSC4-208ENST00000467308 MGAT5BQ3V5L5 792 aa16.96■□□□□ 0.31
TSSC4-208ENST00000467308 TMEM119Q4V9L6 283 aa16.96■□□□□ 0.31
TSSC4-208ENST00000467308 SLC39A12Q504Y0 691 aa16.96■□□□□ 0.31
TSSC4-208ENST00000467308 ARSHQ5FYA8 562 aa16.96■□□□□ 0.31
TSSC4-208ENST00000467308 TMEM196Q5HYL7 178 aa16.96■□□□□ 0.31
TSSC4-208ENST00000467308 C9orf57Q5W0N0 161 aa16.96■□□□□ 0.31
TSSC4-208ENST00000467308 KRBA2Q6ZNG9 492 aa16.96■□□□□ 0.31
TSSC4-208ENST00000467308 RBM43Q6ZSC3 357 aaKnown RBP16.96■□□□□ 0.31
TSSC4-208ENST00000467308 CALML4Q96GE6 196 aa16.96■□□□□ 0.31
TSSC4-208ENST00000467308 LPIN3Q9BQK8 851 aa16.96■□□□□ 0.31
TSSC4-208ENST00000467308 SLC46A2Q9BY10 475 aa16.96■□□□□ 0.31
TSSC4-208ENST00000467308 ARRDC1-AS1Q9H2J1 176 aa16.96■□□□□ 0.31
TSSC4-208ENST00000467308 TMEM63CQ9P1W3 806 aa16.96■□□□□ 0.31
TSSC4-208ENST00000467308 PCDHGA5Q9Y5G8 931 aa16.96■□□□□ 0.31
TSSC4-208ENST00000467308 EML5Q05BV3 1969 aa16.96■□□□□ 0.31
TSSC4-208ENST00000467308 ANO9A1A5B4 782 aa16.95■□□□□ 0.3
TSSC4-208ENST00000467308 TRDMT1O14717 391 aaKnown RBP16.95■□□□□ 0.3
TSSC4-208ENST00000467308 HOXC13P31276 330 aa16.95■□□□□ 0.3
TSSC4-208ENST00000467308 SF3A2Q15428 464 aaKnown RBP16.95■□□□□ 0.3
TSSC4-208ENST00000467308 JADE1Q6IE81 842 aa16.95■□□□□ 0.3
TSSC4-208ENST00000467308 CAVIN1Q6NZI2 390 aaKnown RBP16.95■□□□□ 0.3
TSSC4-208ENST00000467308 CMTM8Q8IZV2 173 aa16.95■□□□□ 0.3
TSSC4-208ENST00000467308 SPPL2BQ8TCT7 592 aa16.95■□□□□ 0.3
TSSC4-208ENST00000467308 CCDC34Q96HJ3 373 aa16.95■□□□□ 0.3
TSSC4-208ENST00000467308 CDK5RAP3Q96JB5 506 aa16.95■□□□□ 0.3
TSSC4-208ENST00000467308 ZC3H10Q96K80 434 aaKnown RBP16.95■□□□□ 0.3
TSSC4-208ENST00000467308 NUP62CLQ9H1M0 184 aa16.95■□□□□ 0.3
TSSC4-208ENST00000467308 GKN1Q9NS71 199 aa16.95■□□□□ 0.3
TSSC4-208ENST00000467308 STK17AQ9UEE5 414 aa16.95■□□□□ 0.3
TSSC4-208ENST00000467308 CPSF3Q9UKF6 684 aaKnown RBP16.95■□□□□ 0.3
TSSC4-208ENST00000467308 LAMA1P25391 3075 aa16.95■□□□□ 0.3
TSSC4-208ENST00000467308 NPHP3-ACAD11A0A0J9YXS1 232 aa16.94■□□□□ 0.3
TSSC4-208ENST00000467308 SOBPA7XYQ1 873 aa16.94■□□□□ 0.3
TSSC4-208ENST00000467308 NFICP08651 508 aa16.94■□□□□ 0.3
TSSC4-208ENST00000467308 CCDC192P0DO97 292 aa16.94■□□□□ 0.3
TSSC4-208ENST00000467308 DDX6P26196 483 aaKnown RBP eCLIP16.94■□□□□ 0.3
TSSC4-208ENST00000467308 ABCD1P33897 745 aa16.94■□□□□ 0.3
TSSC4-208ENST00000467308 AMPD2Q01433 879 aa16.94■□□□□ 0.3
TSSC4-208ENST00000467308 RUNX3Q13761 415 aa16.94■□□□□ 0.3
TSSC4-208ENST00000467308 TMEM132DQ14C87 1099 aa16.94■□□□□ 0.3
TSSC4-208ENST00000467308 KARSQ15046 597 aaKnown RBP16.94■□□□□ 0.3
TSSC4-208ENST00000467308 TAF12Q16514 161 aa16.94■□□□□ 0.3
TSSC4-208ENST00000467308 PLA2G2CQ5R387 149 aa16.94■□□□□ 0.3
TSSC4-208ENST00000467308 N4BP2L1Q5TBK1 243 aaPredicted RBP16.94■□□□□ 0.3
TSSC4-208ENST00000467308 RRAGBQ5VZM2 374 aa16.94■□□□□ 0.3
TSSC4-208ENST00000467308 FSTL4Q6MZW2 842 aa16.94■□□□□ 0.3
TSSC4-208ENST00000467308 PKN3Q6P5Z2 889 aa16.94■□□□□ 0.3
TSSC4-208ENST00000467308 KBTBD6Q86V97 674 aa16.94■□□□□ 0.3
TSSC4-208ENST00000467308 METTL23Q86XA0 190 aa16.94■□□□□ 0.3
TSSC4-208ENST00000467308 THEM5Q8N1Q8 247 aa16.94■□□□□ 0.3
TSSC4-208ENST00000467308 CAMKK1Q8N5S9 505 aa16.94■□□□□ 0.3
TSSC4-208ENST00000467308 FAM212AQ96EL1 285 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms