RNA–Protein interactions for RNA: ENST00000466963.1

CXXC4-202, Transcript of CXXC finger protein 4, humanhuman

TSL 1 (best)

Gene CXXC4, Length 3,130 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-202ENST00000466963 MYL7Q01449 175 aa6.17□□□□□ -1.42
CXXC4-202ENST00000466963 SAFBQ15424 915 aaKnown RBP eCLIP6.17□□□□□ -1.42
CXXC4-202ENST00000466963 CRY1Q16526 586 aa6.17□□□□□ -1.42
CXXC4-202ENST00000466963 CFAP221Q4G0U5 840 aa6.17□□□□□ -1.42
CXXC4-202ENST00000466963 TRIM61Q5EBN2 209 aa6.17□□□□□ -1.42
CXXC4-202ENST00000466963 SPATA1Q5VX52 437 aa6.17□□□□□ -1.42
CXXC4-202ENST00000466963 PLA2G4FQ68DD2 849 aa6.17□□□□□ -1.42
CXXC4-202ENST00000466963 CACTINQ8WUQ7 758 aaKnown RBP6.17□□□□□ -1.42
CXXC4-202ENST00000466963 ING5Q8WYH8 240 aa6.17□□□□□ -1.42
CXXC4-202ENST00000466963 RFFLQ8WZ73 363 aa6.17□□□□□ -1.42
CXXC4-202ENST00000466963 CPB2Q96IY4 423 aa6.17□□□□□ -1.42
CXXC4-202ENST00000466963 SLC26A6Q9BXS9 759 aa6.17□□□□□ -1.42
CXXC4-202ENST00000466963 DPH1Q9BZG8 443 aa6.17□□□□□ -1.42
CXXC4-202ENST00000466963 B3GNT4Q9C0J1 378 aa6.17□□□□□ -1.42
CXXC4-202ENST00000466963 GKN1Q9NS71 199 aa6.17□□□□□ -1.42
CXXC4-202ENST00000466963 DUS2Q9NX74 493 aaKnown RBP6.17□□□□□ -1.42
CXXC4-202ENST00000466963 BAZ2BQ9UIF8 2168 aaKnown RBP6.17□□□□□ -1.42
CXXC4-202ENST00000466963 CITO14578 2027 aa6.17□□□□□ -1.42
CXXC4-202ENST00000466963 SPAG17Q6Q759 2223 aa6.17□□□□□ -1.42
CXXC4-202ENST00000466963 EML1O00423 815 aa6.16□□□□□ -1.42
CXXC4-202ENST00000466963 TRIM66O15016 1216 aa6.16□□□□□ -1.42
CXXC4-202ENST00000466963 EDIL3O43854 480 aa6.16□□□□□ -1.42
CXXC4-202ENST00000466963 CBFA2T3O75081 653 aa6.16□□□□□ -1.42
CXXC4-202ENST00000466963 HNRNPLP14866 589 aaKnown RBP eCLIP6.16□□□□□ -1.42
CXXC4-202ENST00000466963 GJA4P35212 333 aa6.16□□□□□ -1.42
CXXC4-202ENST00000466963 NPEPPSP55786 919 aa6.16□□□□□ -1.42
CXXC4-202ENST00000466963 SNRPFP62306 86 aaKnown RBP6.16□□□□□ -1.42
CXXC4-202ENST00000466963 SCAPQ12770 1279 aa6.16□□□□□ -1.42
CXXC4-202ENST00000466963 MAP7D1Q3KQU3 841 aa6.16□□□□□ -1.42
CXXC4-202ENST00000466963 ZNF568Q3ZCX4 644 aa6.16□□□□□ -1.42
CXXC4-202ENST00000466963 SNX30Q5VWJ9 437 aa6.16□□□□□ -1.42
CXXC4-202ENST00000466963 NCAPH2Q6IBW4 605 aa6.16□□□□□ -1.42
CXXC4-202ENST00000466963 DSTYKQ6XUX3 929 aa6.16□□□□□ -1.42
CXXC4-202ENST00000466963 TADA2BQ86TJ2 420 aa6.16□□□□□ -1.42
CXXC4-202ENST00000466963 TPH2Q8IWU9 490 aa6.16□□□□□ -1.42
CXXC4-202ENST00000466963 HAS1Q92839 578 aa6.16□□□□□ -1.42
CXXC4-202ENST00000466963 CDT1Q9H211 546 aa6.16□□□□□ -1.42
CXXC4-202ENST00000466963 IL21Q9HBE4 155 aa6.16□□□□□ -1.42
CXXC4-202ENST00000466963 HPS4Q9NQG7 708 aa6.16□□□□□ -1.42
CXXC4-202ENST00000466963 MARK1Q9P0L2 795 aa6.16□□□□□ -1.42
CXXC4-202ENST00000466963 NOL7Q9UMY1 257 aaKnown RBP6.16□□□□□ -1.42
CXXC4-202ENST00000466963 ANO9A1A5B4 782 aa6.16□□□□□ -1.42
CXXC4-202ENST00000466963 RNF40O75150 1001 aa6.16□□□□□ -1.42
CXXC4-202ENST00000466963 TDP2O95551 362 aa6.16□□□□□ -1.42
CXXC4-202ENST00000466963 LDHAP00338 332 aaKnown RBP6.16□□□□□ -1.42
CXXC4-202ENST00000466963 ATP2B1P20020 1258 aa6.16□□□□□ -1.42
CXXC4-202ENST00000466963 AKAP5P24588 427 aa6.16□□□□□ -1.42
CXXC4-202ENST00000466963 PDIA3P30101 505 aaKnown RBP6.16□□□□□ -1.42
CXXC4-202ENST00000466963 GALK1P51570 392 aa6.16□□□□□ -1.42
CXXC4-202ENST00000466963 SIM1P81133 766 aaPredicted RBP6.16□□□□□ -1.42
CXXC4-202ENST00000466963 GOLGA8FQ08AF8 430 aa6.16□□□□□ -1.42
CXXC4-202ENST00000466963 GOLGA8DPQ0D2H9 430 aa6.16□□□□□ -1.42
CXXC4-202ENST00000466963 TRIM29Q14134 588 aa6.16□□□□□ -1.42
CXXC4-202ENST00000466963 SMAD1Q15797 465 aaKnown RBP6.16□□□□□ -1.42
CXXC4-202ENST00000466963 EML3Q32P44 896 aa6.16□□□□□ -1.42
CXXC4-202ENST00000466963 HYIQ5T013 277 aa6.16□□□□□ -1.42
CXXC4-202ENST00000466963 KSR1Q8IVT5 923 aa6.16□□□□□ -1.42
CXXC4-202ENST00000466963 TOP6BLQ8N6T0 577 aa6.16□□□□□ -1.42
CXXC4-202ENST00000466963 STKLD1Q8NE28 680 aa6.16□□□□□ -1.42
CXXC4-202ENST00000466963 WDR48Q8TAF3 677 aa6.16□□□□□ -1.42
CXXC4-202ENST00000466963 ADAM32Q8TC27 787 aa6.16□□□□□ -1.42
CXXC4-202ENST00000466963 PGBD1Q96JS3 809 aa6.16□□□□□ -1.42
CXXC4-202ENST00000466963 SLC2A11Q9BYW1 496 aa6.16□□□□□ -1.42
CXXC4-202ENST00000466963 NCKIPSDQ9NZQ3 722 aa6.16□□□□□ -1.42
CXXC4-202ENST00000466963 PCDHB6Q9Y5E3 794 aa6.16□□□□□ -1.42
CXXC4-202ENST00000466963 CACNA1IQ9P0X4 2223 aa6.16□□□□□ -1.42
CXXC4-202ENST00000466963 RIF1Q5UIP0 2472 aaKnown RBP6.16□□□□□ -1.42
CXXC4-202ENST00000466963 EML5Q05BV3 1969 aa6.16□□□□□ -1.42
CXXC4-202ENST00000466963 ADAM12O43184 909 aa6.16□□□□□ -1.42
CXXC4-202ENST00000466963 CCNT1O60563 726 aaKnown RBP6.16□□□□□ -1.42
CXXC4-202ENST00000466963 RTN3O95197 1032 aaPredicted RBP6.16□□□□□ -1.42
CXXC4-202ENST00000466963 OLFM2O95897 454 aa6.16□□□□□ -1.42
CXXC4-202ENST00000466963 BMP15O95972 392 aa6.16□□□□□ -1.42
CXXC4-202ENST00000466963 IGHDP01880 384 aa6.16□□□□□ -1.42
CXXC4-202ENST00000466963 HLA-EP13747 358 aa6.16□□□□□ -1.42
CXXC4-202ENST00000466963 CD59P13987 128 aa6.16□□□□□ -1.42
CXXC4-202ENST00000466963 GRK6P43250 576 aa6.16□□□□□ -1.42
CXXC4-202ENST00000466963 NT5DC1Q5TFE4 455 aa6.16□□□□□ -1.42
CXXC4-202ENST00000466963 DEFB124Q8NES8 71 aa6.16□□□□□ -1.42
CXXC4-202ENST00000466963 GOLGA1Q92805 767 aa6.16□□□□□ -1.42
CXXC4-202ENST00000466963 BCL11AQ9H165 835 aa6.16□□□□□ -1.42
CXXC4-202ENST00000466963 DNAJC25Q9H1X3 360 aa6.16□□□□□ -1.42
CXXC4-202ENST00000466963 ANO2Q9NQ90 1003 aa6.16□□□□□ -1.42
CXXC4-202ENST00000466963 LARSQ9P2J5 1176 aaKnown RBP6.16□□□□□ -1.42
CXXC4-202ENST00000466963 TJP2Q9UDY2 1190 aa6.16□□□□□ -1.42
CXXC4-202ENST00000466963 KIF3AQ9Y496 699 aa6.16□□□□□ -1.42
CXXC4-202ENST00000466963 NUP205Q92621 2012 aa6.16□□□□□ -1.42
CXXC4-202ENST00000466963 DNAH12Q6ZR08 3092 aa6.15□□□□□ -1.42
CXXC4-202ENST00000466963 TTC26A0AVF1 554 aa6.15□□□□□ -1.42
CXXC4-202ENST00000466963 OGTO15294 1046 aa6.15□□□□□ -1.42
CXXC4-202ENST00000466963 CCR2P41597 374 aa6.15□□□□□ -1.42
CXXC4-202ENST00000466963 MATKP42679 507 aa6.15□□□□□ -1.42
CXXC4-202ENST00000466963 DHPSP49366 369 aaPredicted RBP6.15□□□□□ -1.42
CXXC4-202ENST00000466963 TAF6P49848 677 aa6.15□□□□□ -1.42
CXXC4-202ENST00000466963 EIF4HQ15056 248 aaKnown RBP6.15□□□□□ -1.42
CXXC4-202ENST00000466963 BTBD8Q5XKL5 378 aa6.15□□□□□ -1.42
CXXC4-202ENST00000466963 Q6ZUG5 572 aa6.15□□□□□ -1.42
CXXC4-202ENST00000466963 UCMAQ8WVF2 138 aa6.15□□□□□ -1.42
CXXC4-202ENST00000466963 TCEAL4Q96EI5 215 aa6.15□□□□□ -1.42
CXXC4-202ENST00000466963 ZNF578Q96N58 590 aaPredicted RBP6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms