RNA–Protein interactions for RNA: ENST00000466288.1

CXCR4-203, Transcript of C-X-C motif chemokine receptor 4, humanhuman

TSL 1 (best)

Gene CXCR4, Length 1,485 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-203ENST00000466288 FAM189A1O60320 539 aa15.65■□□□□ 0.1
CXCR4-203ENST00000466288 ADRB2P07550 413 aa15.65■□□□□ 0.1
CXCR4-203ENST00000466288 HAPLN1P10915 354 aaPredicted RBP15.65■□□□□ 0.1
CXCR4-203ENST00000466288 GUCY2CP25092 1073 aa15.65■□□□□ 0.1
CXCR4-203ENST00000466288 ENOX2Q16206 610 aaKnown RBP15.65■□□□□ 0.1
CXCR4-203ENST00000466288 KCNK18Q7Z418 384 aa15.65■□□□□ 0.1
CXCR4-203ENST00000466288 LRRTM3Q86VH5 581 aa15.65■□□□□ 0.1
CXCR4-203ENST00000466288 MON1AQ86VX9 555 aa15.65■□□□□ 0.1
CXCR4-203ENST00000466288 RASSF3Q86WH2 238 aa15.65■□□□□ 0.1
CXCR4-203ENST00000466288 IGSF22Q8N9C0 903 aa15.65■□□□□ 0.1
CXCR4-203ENST00000466288 TSTD1Q8NFU3 115 aa15.65■□□□□ 0.1
CXCR4-203ENST00000466288 EXOC4Q96A65 974 aa15.65■□□□□ 0.1
CXCR4-203ENST00000466288 EVLQ9UI08 416 aaPredicted RBP15.65■□□□□ 0.1
CXCR4-203ENST00000466288 KLK13Q9UKR3 277 aa15.65■□□□□ 0.1
CXCR4-203ENST00000466288 ATG2BQ96BY7 2078 aa15.64■□□□□ 0.09
CXCR4-203ENST00000466288 PLS3P13797 630 aa15.64■□□□□ 0.09
CXCR4-203ENST00000466288 PAX3P23760 479 aa15.64■□□□□ 0.09
CXCR4-203ENST00000466288 ANP32AP39687 249 aaKnown RBP15.64■□□□□ 0.09
CXCR4-203ENST00000466288 MTF1Q14872 753 aa15.64■□□□□ 0.09
CXCR4-203ENST00000466288 SAFBQ15424 915 aaKnown RBP eCLIP15.64■□□□□ 0.09
CXCR4-203ENST00000466288 TTC38Q5R3I4 469 aa15.64■□□□□ 0.09
CXCR4-203ENST00000466288 C9orf57Q5W0N0 161 aa15.64■□□□□ 0.09
CXCR4-203ENST00000466288 CPA6Q8N4T0 437 aa15.64■□□□□ 0.09
CXCR4-203ENST00000466288 SPPL2BQ8TCT7 592 aa15.64■□□□□ 0.09
CXCR4-203ENST00000466288 C2orf15Q8WU43 125 aaKnown RBP15.64■□□□□ 0.09
CXCR4-203ENST00000466288 TSPAN18Q96SJ8 248 aa15.64■□□□□ 0.09
CXCR4-203ENST00000466288 TIPINQ9BVW5 301 aa15.64■□□□□ 0.09
CXCR4-203ENST00000466288 STK24Q9Y6E0 443 aa15.64■□□□□ 0.09
CXCR4-203ENST00000466288 PP2D1A8MPX8 630 aa15.63■□□□□ 0.09
CXCR4-203ENST00000466288 PIRO00625 290 aa15.63■□□□□ 0.09
CXCR4-203ENST00000466288 CAPNS1P04632 268 aa15.63■□□□□ 0.09
CXCR4-203ENST00000466288 MATR3P43243 847 aaKnown RBP eCLIP15.63■□□□□ 0.09
CXCR4-203ENST00000466288 SMARCB1Q12824 385 aa15.63■□□□□ 0.09
CXCR4-203ENST00000466288 PSMD2Q13200 908 aa15.63■□□□□ 0.09
CXCR4-203ENST00000466288 ANO7Q6IWH7 933 aa15.63■□□□□ 0.09
CXCR4-203ENST00000466288 OSCP1Q8WVF1 389 aa15.63■□□□□ 0.09
CXCR4-203ENST00000466288 PIGKQ92643 395 aa15.63■□□□□ 0.09
CXCR4-203ENST00000466288 CNOT6LQ96LI5 555 aaKnown RBP15.63■□□□□ 0.09
CXCR4-203ENST00000466288 DUS2Q9NX74 493 aaKnown RBP15.63■□□□□ 0.09
CXCR4-203ENST00000466288 KCNG1Q9UIX4 513 aa15.63■□□□□ 0.09
CXCR4-203ENST00000466288 ABCA7Q8IZY2 2146 aa15.63■□□□□ 0.09
CXCR4-203ENST00000466288 ANO9A1A5B4 782 aa15.62■□□□□ 0.09
CXCR4-203ENST00000466288 ANTXRLA6NF34 631 aa15.62■□□□□ 0.09
CXCR4-203ENST00000466288 TADA3O75528 432 aa15.62■□□□□ 0.09
CXCR4-203ENST00000466288 DHPSP49366 369 aaPredicted RBP15.62■□□□□ 0.09
CXCR4-203ENST00000466288 SMTNP53814 917 aa15.62■□□□□ 0.09
CXCR4-203ENST00000466288 RAD51AP2Q09MP3 1159 aa15.62■□□□□ 0.09
CXCR4-203ENST00000466288 ST3GAL1Q11201 340 aa15.62■□□□□ 0.09
CXCR4-203ENST00000466288 LMAN2Q12907 356 aa15.62■□□□□ 0.09
CXCR4-203ENST00000466288 NBR1Q14596 966 aa15.62■□□□□ 0.09
CXCR4-203ENST00000466288 ZNF77Q15935 545 aa15.62■□□□□ 0.09
CXCR4-203ENST00000466288 TRIM61Q5EBN2 209 aa15.62■□□□□ 0.09
CXCR4-203ENST00000466288 JADE1Q6IE81 842 aa15.62■□□□□ 0.09
CXCR4-203ENST00000466288 PIP4P1Q86T03 277 aa15.62■□□□□ 0.09
CXCR4-203ENST00000466288 STKLD1Q8NE28 680 aa15.62■□□□□ 0.09
CXCR4-203ENST00000466288 MDGA1Q8NFP4 955 aa15.62■□□□□ 0.09
CXCR4-203ENST00000466288 OLIG1Q8TAK6 271 aa15.62■□□□□ 0.09
CXCR4-203ENST00000466288 USP33Q8TEY7 942 aa15.62■□□□□ 0.09
CXCR4-203ENST00000466288 MRPS31Q92665 395 aaKnown RBP15.62■□□□□ 0.09
CXCR4-203ENST00000466288 MMTAG2Q9BU76 263 aaKnown RBP15.62■□□□□ 0.09
CXCR4-203ENST00000466288 FOXP1Q9H334 677 aaPredicted RBP15.62■□□□□ 0.09
CXCR4-203ENST00000466288 SLC32A1Q9H598 525 aa15.62■□□□□ 0.09
CXCR4-203ENST00000466288 RPF1Q9H9Y2 349 aaKnown RBP15.62■□□□□ 0.09
CXCR4-203ENST00000466288 ABI2Q9NYB9 513 aaPredicted RBP15.62■□□□□ 0.09
CXCR4-203ENST00000466288 DSEQ9UL01 958 aa15.62■□□□□ 0.09
CXCR4-203ENST00000466288 WNT6Q9Y6F9 365 aa15.62■□□□□ 0.09
CXCR4-203ENST00000466288 SPAARA0A1B0GVQ0 90 aa15.61■□□□□ 0.09
CXCR4-203ENST00000466288 FAM221BA6H8Z2 402 aa15.61■□□□□ 0.09
CXCR4-203ENST00000466288 K7EQS6 105 aa15.61■□□□□ 0.09
CXCR4-203ENST00000466288 CDC25AP30304 524 aa15.61■□□□□ 0.09
CXCR4-203ENST00000466288 GPR15P49685 360 aa15.61■□□□□ 0.09
CXCR4-203ENST00000466288 FAM160A1Q05DH4 1040 aa15.61■□□□□ 0.09
CXCR4-203ENST00000466288 SEMA3BQ13214 749 aa15.61■□□□□ 0.09
CXCR4-203ENST00000466288 KYAT1Q16773 422 aa15.61■□□□□ 0.09
CXCR4-203ENST00000466288 EML3Q32P44 896 aa15.61■□□□□ 0.09
CXCR4-203ENST00000466288 KCNN1Q92952 543 aa15.61■□□□□ 0.09
CXCR4-203ENST00000466288 ATP2A3Q93084 1043 aa15.61■□□□□ 0.09
CXCR4-203ENST00000466288 TMEM74BQ9NUR3 256 aa15.61■□□□□ 0.09
CXCR4-203ENST00000466288 CYB561D2O14569 222 aa15.6■□□□□ 0.09
CXCR4-203ENST00000466288 OGTO15294 1046 aa15.6■□□□□ 0.09
CXCR4-203ENST00000466288 NFICP08651 508 aa15.6■□□□□ 0.09
CXCR4-203ENST00000466288 ENGP17813 658 aa15.6■□□□□ 0.09
CXCR4-203ENST00000466288 MAPK8P45983 427 aa15.6■□□□□ 0.09
CXCR4-203ENST00000466288 TRAPPC10P48553 1259 aa15.6■□□□□ 0.09
CXCR4-203ENST00000466288 NCKAP1LP55160 1127 aa15.6■□□□□ 0.09
CXCR4-203ENST00000466288 SIM1P81133 766 aaPredicted RBP15.6■□□□□ 0.09
CXCR4-203ENST00000466288 USP4Q13107 963 aa15.6■□□□□ 0.09
CXCR4-203ENST00000466288 IL17AQ16552 155 aa15.6■□□□□ 0.09
CXCR4-203ENST00000466288 KRT79Q5XKE5 535 aa15.6■□□□□ 0.09
CXCR4-203ENST00000466288 WSCD1Q658N2 575 aa15.6■□□□□ 0.09
CXCR4-203ENST00000466288 METTL23Q86XA0 190 aa15.6■□□□□ 0.09
CXCR4-203ENST00000466288 PROSER1Q86XN7 944 aa15.6■□□□□ 0.09
CXCR4-203ENST00000466288 THEM5Q8N1Q8 247 aa15.6■□□□□ 0.09
CXCR4-203ENST00000466288 CCDC26Q8TAB7 109 aa15.6■□□□□ 0.09
CXCR4-203ENST00000466288 BICD1Q96G01 975 aa15.6■□□□□ 0.09
CXCR4-203ENST00000466288 FNBP1Q96RU3 617 aa15.6■□□□□ 0.09
CXCR4-203ENST00000466288 SLC22A12Q96S37 553 aa15.6■□□□□ 0.09
CXCR4-203ENST00000466288 NUSAP1Q9BXS6 441 aaKnown RBP15.6■□□□□ 0.09
CXCR4-203ENST00000466288 RAB34Q9BZG1 259 aa15.6■□□□□ 0.09
CXCR4-203ENST00000466288 TMLHEQ9NVH6 421 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms