RNA–Protein interactions for RNA: ENST00000465209.1

COL11A1-207, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 297 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-207ENST00000465209 POLR3BQ9NW08 1133 aaPredicted RBP11.81□□□□□ -0.52
COL11A1-207ENST00000465209 DPP3Q9NY33 737 aa11.81□□□□□ -0.52
COL11A1-207ENST00000465209 ABI2Q9NYB9 513 aaPredicted RBP11.81□□□□□ -0.52
COL11A1-207ENST00000465209 ZMYM5Q9UJ78 669 aa11.81□□□□□ -0.52
COL11A1-207ENST00000465209 CEP295Q9C0D2 2601 aa11.8□□□□□ -0.52
COL11A1-207ENST00000465209 FOXD2O60548 495 aaPredicted RBP11.8□□□□□ -0.52
COL11A1-207ENST00000465209 EGFP01133 1207 aa11.8□□□□□ -0.52
COL11A1-207ENST00000465209 ZNF806P0C7X5 589 aa11.8□□□□□ -0.52
COL11A1-207ENST00000465209 ARSAP15289 507 aa11.8□□□□□ -0.52
COL11A1-207ENST00000465209 DDX6P26196 483 aaKnown RBP eCLIP11.8□□□□□ -0.52
COL11A1-207ENST00000465209 PMLP29590 882 aa11.8□□□□□ -0.52
COL11A1-207ENST00000465209 PXNP49023 591 aaPredicted RBP11.8□□□□□ -0.52
COL11A1-207ENST00000465209 DHX8Q14562 1220 aaKnown RBP11.8□□□□□ -0.52
COL11A1-207ENST00000465209 ZNF268Q14587 947 aaPredicted RBP11.8□□□□□ -0.52
COL11A1-207ENST00000465209 CCDC142Q17RM4 750 aa11.8□□□□□ -0.52
COL11A1-207ENST00000465209 TXNDC8Q6A555 127 aa11.8□□□□□ -0.52
COL11A1-207ENST00000465209 ADALQ6DHV7 355 aa11.8□□□□□ -0.52
COL11A1-207ENST00000465209 KBTBD6Q86V97 674 aa11.8□□□□□ -0.52
COL11A1-207ENST00000465209 MAB21L3Q8N8X9 362 aa11.8□□□□□ -0.52
COL11A1-207ENST00000465209 FAM200AQ8TCP9 573 aa11.8□□□□□ -0.52
COL11A1-207ENST00000465209 LARP4BQ92615 738 aaKnown RBP11.8□□□□□ -0.52
COL11A1-207ENST00000465209 CALML4Q96GE6 196 aa11.8□□□□□ -0.52
COL11A1-207ENST00000465209 LOXL4Q96JB6 756 aa11.8□□□□□ -0.52
COL11A1-207ENST00000465209 ZC3H10Q96K80 434 aaKnown RBP11.8□□□□□ -0.52
COL11A1-207ENST00000465209 ARRDC1-AS1Q9H2J1 176 aa11.8□□□□□ -0.52
COL11A1-207ENST00000465209 KIF9Q9HAQ2 790 aa11.8□□□□□ -0.52
COL11A1-207ENST00000465209 AGO2Q9UKV8 859 aaKnown RBP11.8□□□□□ -0.52
COL11A1-207ENST00000465209 KIF3AQ9Y496 699 aa11.8□□□□□ -0.52
COL11A1-207ENST00000465209 TNRC6BQ9UPQ9 1833 aaKnown RBP11.79□□□□□ -0.52
COL11A1-207ENST00000465209 SOBPA7XYQ1 873 aa11.79□□□□□ -0.52
COL11A1-207ENST00000465209 KPNA7A9QM74 516 aa11.79□□□□□ -0.52
COL11A1-207ENST00000465209 RNF40O75150 1001 aa11.79□□□□□ -0.52
COL11A1-207ENST00000465209 RPP40O75818 363 aaKnown RBP11.79□□□□□ -0.52
COL11A1-207ENST00000465209 AKAP3O75969 853 aa11.79□□□□□ -0.52
COL11A1-207ENST00000465209 NOL4O94818 638 aa11.79□□□□□ -0.52
COL11A1-207ENST00000465209 ABCD1P33897 745 aa11.79□□□□□ -0.52
COL11A1-207ENST00000465209 LONP1P36776 959 aaKnown RBP11.79□□□□□ -0.52
COL11A1-207ENST00000465209 UBA7P41226 1012 aa11.79□□□□□ -0.52
COL11A1-207ENST00000465209 KCNA1Q09470 495 aa11.79□□□□□ -0.52
COL11A1-207ENST00000465209 USP4Q13107 963 aa11.79□□□□□ -0.52
COL11A1-207ENST00000465209 RABEP1Q15276 862 aa11.79□□□□□ -0.52
COL11A1-207ENST00000465209 ZNF77Q15935 545 aa11.79□□□□□ -0.52
COL11A1-207ENST00000465209 CCDC6Q16204 474 aa11.79□□□□□ -0.52
COL11A1-207ENST00000465209 ST3GAL2Q16842 350 aa11.79□□□□□ -0.52
COL11A1-207ENST00000465209 SDHAF4Q5VUM1 108 aa11.79□□□□□ -0.52
COL11A1-207ENST00000465209 USP49Q70CQ1 688 aa11.79□□□□□ -0.52
COL11A1-207ENST00000465209 CEP68Q76N32 757 aa11.79□□□□□ -0.52
COL11A1-207ENST00000465209 ZNF720Q7Z2F6 126 aa11.79□□□□□ -0.52
COL11A1-207ENST00000465209 MON1AQ86VX9 555 aa11.79□□□□□ -0.52
COL11A1-207ENST00000465209 SFR1Q86XK3 245 aa11.79□□□□□ -0.52
COL11A1-207ENST00000465209 NT5DC4Q86YG4 428 aa11.79□□□□□ -0.52
COL11A1-207ENST00000465209 ABCA7Q8IZY2 2146 aa11.79□□□□□ -0.52
COL11A1-207ENST00000465209 PDCL2Q8N4E4 241 aa11.79□□□□□ -0.52
COL11A1-207ENST00000465209 C1orf127Q8N9H9 656 aa11.79□□□□□ -0.52
COL11A1-207ENST00000465209 TRMT2BQ96GJ1 504 aaKnown RBP11.79□□□□□ -0.52
COL11A1-207ENST00000465209 FAM84AQ96KN4 292 aa11.79□□□□□ -0.52
COL11A1-207ENST00000465209 MYRFLQ96LU7 910 aa11.79□□□□□ -0.52
COL11A1-207ENST00000465209 GCNAQ96QF7 691 aa11.79□□□□□ -0.52
COL11A1-207ENST00000465209 SLC22A12Q96S37 553 aa11.79□□□□□ -0.52
COL11A1-207ENST00000465209 TDP1Q9NUW8 608 aa11.79□□□□□ -0.52
COL11A1-207ENST00000465209 THG1LQ9NWX6 298 aaKnown RBP11.79□□□□□ -0.52
COL11A1-207ENST00000465209 L1RE1Q9UN81 338 aa11.79□□□□□ -0.52
COL11A1-207ENST00000465209 LAMA5O15230 3695 aa11.79□□□□□ -0.52
COL11A1-207ENST00000465209 PLXND1Q9Y4D7 1925 aa11.78□□□□□ -0.52
COL11A1-207ENST00000465209 AXIN1O15169 862 aa11.78□□□□□ -0.52
COL11A1-207ENST00000465209 TBCAO75347 108 aaKnown RBP11.78□□□□□ -0.52
COL11A1-207ENST00000465209 GJA4P35212 333 aa11.78□□□□□ -0.52
COL11A1-207ENST00000465209 AVPR1AP37288 418 aa11.78□□□□□ -0.52
COL11A1-207ENST00000465209 GRSF1Q12849 480 aaKnown RBP eCLIP11.78□□□□□ -0.52
COL11A1-207ENST00000465209 SV2CQ496J9 727 aa11.78□□□□□ -0.52
COL11A1-207ENST00000465209 SLFN12LQ6IEE8 588 aa11.78□□□□□ -0.52
COL11A1-207ENST00000465209 CACNA2D4Q7Z3S7 1137 aa11.78□□□□□ -0.52
COL11A1-207ENST00000465209 OSTM1Q86WC4 334 aa11.78□□□□□ -0.52
COL11A1-207ENST00000465209 METTL23Q86XA0 190 aa11.78□□□□□ -0.52
COL11A1-207ENST00000465209 BRSK2Q8IWQ3 736 aa11.78□□□□□ -0.52
COL11A1-207ENST00000465209 DCP1BQ8IZD4 617 aaKnown RBP11.78□□□□□ -0.52
COL11A1-207ENST00000465209 THEM5Q8N1Q8 247 aa11.78□□□□□ -0.52
COL11A1-207ENST00000465209 HVCN1Q96D96 273 aa11.78□□□□□ -0.52
COL11A1-207ENST00000465209 DNAJC19Q96DA6 116 aa11.78□□□□□ -0.52
COL11A1-207ENST00000465209 ZNF560Q96MR9 790 aa11.78□□□□□ -0.52
COL11A1-207ENST00000465209 PI4K2AQ9BTU6 479 aa11.78□□□□□ -0.52
COL11A1-207ENST00000465209 SMOC1Q9H4F8 434 aa11.78□□□□□ -0.52
COL11A1-207ENST00000465209 ABCB6Q9NP58 842 aa11.78□□□□□ -0.52
COL11A1-207ENST00000465209 PCDHB5Q9Y5E4 795 aa11.78□□□□□ -0.52
COL11A1-207ENST00000465209 PCDHGA5Q9Y5G8 931 aa11.78□□□□□ -0.52
COL11A1-207ENST00000465209 H3BQV1 296 aa11.77□□□□□ -0.53
COL11A1-207ENST00000465209 HCRTO43612 131 aa11.77□□□□□ -0.53
COL11A1-207ENST00000465209 IL18RAPO95256 599 aa11.77□□□□□ -0.53
COL11A1-207ENST00000465209 CSH1P0DML2 217 aa11.77□□□□□ -0.53
COL11A1-207ENST00000465209 CSH2P0DML3 217 aa11.77□□□□□ -0.53
COL11A1-207ENST00000465209 CHRM1P11229 460 aaPredicted RBP11.77□□□□□ -0.53
COL11A1-207ENST00000465209 TCF3P15923 654 aa11.77□□□□□ -0.53
COL11A1-207ENST00000465209 CYP2F1P24903 491 aa11.77□□□□□ -0.53
COL11A1-207ENST00000465209 POLR2BP30876 1174 aaKnown RBP11.77□□□□□ -0.53
COL11A1-207ENST00000465209 DDIT3P35638 169 aa11.77□□□□□ -0.53
COL11A1-207ENST00000465209 GALK1P51570 392 aa11.77□□□□□ -0.53
COL11A1-207ENST00000465209 CASP5P51878 434 aa11.77□□□□□ -0.53
COL11A1-207ENST00000465209 SHC2P98077 582 aa11.77□□□□□ -0.53
COL11A1-207ENST00000465209 FAM160A1Q05DH4 1040 aa11.77□□□□□ -0.53
COL11A1-207ENST00000465209 MTF1Q14872 753 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms