RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 AIFM2Q9BRQ8 373 aa7.38□□□□□ -1.23
PTCD3-205ENST00000464541 ZNF518BQ9C0D4 1074 aa7.38□□□□□ -1.23
PTCD3-205ENST00000464541 XPR1Q9UBH6 696 aa7.38□□□□□ -1.23
PTCD3-205ENST00000464541 SHOC2Q9UQ13 582 aa7.38□□□□□ -1.23
PTCD3-205ENST00000464541 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.38□□□□□ -1.23
PTCD3-205ENST00000464541 TBX3O15119 743 aa7.37□□□□□ -1.23
PTCD3-205ENST00000464541 PEX1O43933 1283 aa7.37□□□□□ -1.23
PTCD3-205ENST00000464541 MYF5P13349 255 aa7.37□□□□□ -1.23
PTCD3-205ENST00000464541 FOLR3P41439 243 aa7.37□□□□□ -1.23
PTCD3-205ENST00000464541 SEMA5AQ13591 1074 aa7.37□□□□□ -1.23
PTCD3-205ENST00000464541 GALEQ14376 348 aa7.37□□□□□ -1.23
PTCD3-205ENST00000464541 KIAA0895LQ68EN5 471 aa7.37□□□□□ -1.23
PTCD3-205ENST00000464541 LAYNQ6UX15 382 aa7.37□□□□□ -1.23
PTCD3-205ENST00000464541 FAM109AQ8N4B1 249 aa7.37□□□□□ -1.23
PTCD3-205ENST00000464541 BTBD1Q9H0C5 482 aa7.37□□□□□ -1.23
PTCD3-205ENST00000464541 BHMT2Q9H2M3 363 aa7.37□□□□□ -1.23
PTCD3-205ENST00000464541 SMOC2Q9H3U7 446 aa7.37□□□□□ -1.23
PTCD3-205ENST00000464541 RGS17Q9UGC6 210 aaPredicted RBP7.37□□□□□ -1.23
PTCD3-205ENST00000464541 A0A087X1B8 175 aa7.36□□□□□ -1.23
PTCD3-205ENST00000464541 PEX2P28328 305 aa7.36□□□□□ -1.23
PTCD3-205ENST00000464541 CD6P30203 668 aa7.36□□□□□ -1.23
PTCD3-205ENST00000464541 PPIFP30405 207 aaKnown RBP7.36□□□□□ -1.23
PTCD3-205ENST00000464541 MPLP40238 635 aa7.36□□□□□ -1.23
PTCD3-205ENST00000464541 UCP3P55916 312 aa7.36□□□□□ -1.23
PTCD3-205ENST00000464541 SLC13A2Q13183 592 aa7.36□□□□□ -1.23
PTCD3-205ENST00000464541 PTPRRQ15256 657 aa7.36□□□□□ -1.23
PTCD3-205ENST00000464541 CNGA2Q16280 664 aa7.36□□□□□ -1.23
PTCD3-205ENST00000464541 PCSK4Q6UW60 755 aa7.36□□□□□ -1.23
PTCD3-205ENST00000464541 COL23A1Q86Y22 540 aaPredicted RBP7.36□□□□□ -1.23
PTCD3-205ENST00000464541 DNAJC5GQ8N7S2 189 aa7.36□□□□□ -1.23
PTCD3-205ENST00000464541 B3GALNT2Q8NCR0 500 aa7.36□□□□□ -1.23
PTCD3-205ENST00000464541 SLC30A5Q8TAD4 765 aa7.36□□□□□ -1.23
PTCD3-205ENST00000464541 NMD3Q96D46 503 aaKnown RBP7.36□□□□□ -1.23
PTCD3-205ENST00000464541 SMURF2Q9HAU4 748 aa7.36□□□□□ -1.23
PTCD3-205ENST00000464541 USP19O94966 1318 aa7.35□□□□□ -1.23
PTCD3-205ENST00000464541 FOXN3O00409 490 aaPredicted RBP7.35□□□□□ -1.23
PTCD3-205ENST00000464541 DCLK1O15075 740 aa7.35□□□□□ -1.23
PTCD3-205ENST00000464541 YY2O15391 372 aa7.35□□□□□ -1.23
PTCD3-205ENST00000464541 MPPED1O15442 326 aa7.35□□□□□ -1.23
PTCD3-205ENST00000464541 BRAFP15056 766 aa7.35□□□□□ -1.23
PTCD3-205ENST00000464541 CHRM3P20309 590 aa7.35□□□□□ -1.23
PTCD3-205ENST00000464541 LRPAP1P30533 357 aa7.35□□□□□ -1.23
PTCD3-205ENST00000464541 PXNP49023 591 aaPredicted RBP7.35□□□□□ -1.23
PTCD3-205ENST00000464541 BOP1Q14137 746 aaKnown RBP7.35□□□□□ -1.23
PTCD3-205ENST00000464541 RBM20Q5T481 1227 aaKnown RBP7.35□□□□□ -1.23
PTCD3-205ENST00000464541 GAS2L3Q86XJ1 694 aa7.35□□□□□ -1.23
PTCD3-205ENST00000464541 KRT78Q8N1N4 520 aa7.35□□□□□ -1.23
PTCD3-205ENST00000464541 SLC44A3Q8N4M1 653 aa7.35□□□□□ -1.23
PTCD3-205ENST00000464541 TIFAQ96CG3 184 aa7.35□□□□□ -1.23
PTCD3-205ENST00000464541 CHFRQ96EP1 664 aa7.35□□□□□ -1.23
PTCD3-205ENST00000464541 PTDSS2Q9BVG9 487 aa7.35□□□□□ -1.23
PTCD3-205ENST00000464541 MRIQ9BWK5 157 aa7.35□□□□□ -1.23
PTCD3-205ENST00000464541 NUP62CLQ9H1M0 184 aa7.35□□□□□ -1.23
PTCD3-205ENST00000464541 KIAA1586Q9HCI6 787 aa7.35□□□□□ -1.23
PTCD3-205ENST00000464541 AFF4Q9UHB7 1163 aaKnown RBP7.35□□□□□ -1.23
PTCD3-205ENST00000464541 CCDC151A5D8V7 595 aa7.34□□□□□ -1.23
PTCD3-205ENST00000464541 TRIM43BA6NCK2 446 aa7.34□□□□□ -1.23
PTCD3-205ENST00000464541 PPP3CBP16298 524 aa7.34□□□□□ -1.23
PTCD3-205ENST00000464541 ZNF134P52741 427 aa7.34□□□□□ -1.23
PTCD3-205ENST00000464541 SUMO3P55854 103 aaPredicted RBP7.34□□□□□ -1.23
PTCD3-205ENST00000464541 MRPS35P82673 323 aaKnown RBP7.34□□□□□ -1.23
PTCD3-205ENST00000464541 CTBP1Q13363 440 aa7.34□□□□□ -1.23
PTCD3-205ENST00000464541 TMEM108Q6UXF1 575 aa7.34□□□□□ -1.23
PTCD3-205ENST00000464541 SLC15A4Q8N697 577 aa7.34□□□□□ -1.23
PTCD3-205ENST00000464541 LPIN2Q92539 896 aa7.34□□□□□ -1.23
PTCD3-205ENST00000464541 TRIM43Q96BQ3 446 aaPredicted RBP7.34□□□□□ -1.23
PTCD3-205ENST00000464541 FAM136AQ96C01 138 aa7.34□□□□□ -1.23
PTCD3-205ENST00000464541 MSLNLQ96KJ4 702 aa7.34□□□□□ -1.23
PTCD3-205ENST00000464541 MESP1Q9BRJ9 268 aa7.34□□□□□ -1.23
PTCD3-205ENST00000464541 ALG8Q9BVK2 526 aa7.34□□□□□ -1.23
PTCD3-205ENST00000464541 SARGQ9BW04 601 aa7.34□□□□□ -1.23
PTCD3-205ENST00000464541 KRTAP4-11Q9BYQ6 195 aa7.34□□□□□ -1.23
PTCD3-205ENST00000464541 AMBRA1Q9C0C7 1298 aa7.34□□□□□ -1.23
PTCD3-205ENST00000464541 TTYH3Q9C0H2 523 aa7.34□□□□□ -1.23
PTCD3-205ENST00000464541 A1CFQ9NQ94 594 aaKnown RBP7.34□□□□□ -1.23
PTCD3-205ENST00000464541 LRIT1Q9P2V4 623 aa7.34□□□□□ -1.23
PTCD3-205ENST00000464541 OGDHLQ9ULD0 1010 aa7.34□□□□□ -1.23
PTCD3-205ENST00000464541 DMRT1Q9Y5R6 373 aa7.34□□□□□ -1.23
PTCD3-205ENST00000464541 MBD3L4A6NDZ8 208 aaPredicted RBP7.33□□□□□ -1.24
PTCD3-205ENST00000464541 MBD3L3A6NE82 208 aaPredicted RBP7.33□□□□□ -1.24
PTCD3-205ENST00000464541 TRIM27P14373 513 aa7.33□□□□□ -1.24
PTCD3-205ENST00000464541 PROZP22891 400 aa7.33□□□□□ -1.24
PTCD3-205ENST00000464541 ADRA1BP35368 520 aa7.33□□□□□ -1.24
PTCD3-205ENST00000464541 HMGA2P52926 109 aa7.33□□□□□ -1.24
PTCD3-205ENST00000464541 FOXI1Q12951 378 aa7.33□□□□□ -1.24
PTCD3-205ENST00000464541 ERCC6LQ2NKX8 1250 aa7.33□□□□□ -1.24
PTCD3-205ENST00000464541 TEDDM1Q5T9Z0 273 aa7.33□□□□□ -1.24
PTCD3-205ENST00000464541 ICE2Q659A1 982 aa7.33□□□□□ -1.24
PTCD3-205ENST00000464541 MYCBPAPQ8TBZ2 947 aa7.33□□□□□ -1.24
PTCD3-205ENST00000464541 MAML1Q92585 1016 aa7.33□□□□□ -1.24
PTCD3-205ENST00000464541 TPSD1Q9BZJ3 242 aa7.33□□□□□ -1.24
PTCD3-205ENST00000464541 IKZF4Q9H2S9 585 aa7.33□□□□□ -1.24
PTCD3-205ENST00000464541 ZNF287Q9HBT7 754 aa7.33□□□□□ -1.24
PTCD3-205ENST00000464541 ZSCAN32Q9NX65 697 aa7.33□□□□□ -1.24
PTCD3-205ENST00000464541 ORC4O43929 436 aa7.32□□□□□ -1.24
PTCD3-205ENST00000464541 CAND2O75155 1236 aa7.32□□□□□ -1.24
PTCD3-205ENST00000464541 PHKG2P15735 406 aa7.32□□□□□ -1.24
PTCD3-205ENST00000464541 TYRP1P17643 537 aa7.32□□□□□ -1.24
PTCD3-205ENST00000464541 GNALP38405 381 aa7.32□□□□□ -1.24
PTCD3-205ENST00000464541 FMO1Q01740 532 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms