RNA–Protein interactions for RNA: ENST00000463948.1

EGFR-209, Transcript of epidermal growth factor receptor, humanhuman

TSL 3

Gene EGFR, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGFR-209ENST00000463948 ATG2BQ96BY7 2078 aa20.25■□□□□ 0.83
EGFR-209ENST00000463948 F11P03951 625 aa20.24■□□□□ 0.83
EGFR-209ENST00000463948 ITGB3P05106 788 aa20.24■□□□□ 0.83
EGFR-209ENST00000463948 RETP07949 1114 aa20.24■□□□□ 0.83
EGFR-209ENST00000463948 GAP43P17677 238 aa20.24■□□□□ 0.83
EGFR-209ENST00000463948 WEE1P30291 646 aa20.24■□□□□ 0.83
EGFR-209ENST00000463948 AVPR1AP37288 418 aa20.24■□□□□ 0.83
EGFR-209ENST00000463948 PXNP49023 591 aaPredicted RBP20.24■□□□□ 0.83
EGFR-209ENST00000463948 CASP5P51878 434 aa20.24■□□□□ 0.83
EGFR-209ENST00000463948 POU5F1Q01860 360 aaKnown RBP20.24■□□□□ 0.83
EGFR-209ENST00000463948 SMARCB1Q12824 385 aa20.24■□□□□ 0.83
EGFR-209ENST00000463948 BFSP1Q12934 665 aa20.24■□□□□ 0.83
EGFR-209ENST00000463948 DDR2Q16832 855 aa20.24■□□□□ 0.83
EGFR-209ENST00000463948 L1TD1Q5T7N2 865 aaKnown RBP20.24■□□□□ 0.83
EGFR-209ENST00000463948 LONP2Q86WA8 852 aa20.24■□□□□ 0.83
EGFR-209ENST00000463948 CSGALNACT2Q8N6G5 542 aa20.24■□□□□ 0.83
EGFR-209ENST00000463948 USP13Q92995 863 aaPredicted RBP20.24■□□□□ 0.83
EGFR-209ENST00000463948 HVCN1Q96D96 273 aa20.24■□□□□ 0.83
EGFR-209ENST00000463948 ZNF560Q96MR9 790 aa20.24■□□□□ 0.83
EGFR-209ENST00000463948 FGFBP2Q9BYJ0 223 aa20.24■□□□□ 0.83
EGFR-209ENST00000463948 EBF3Q9H4W6 596 aa20.24■□□□□ 0.83
EGFR-209ENST00000463948 TCHHQ07283 1943 aa20.23■□□□□ 0.83
EGFR-209ENST00000463948 OTOL1A6NHN0 477 aaPredicted RBP20.23■□□□□ 0.83
EGFR-209ENST00000463948 EXTL3O43909 919 aa20.23■□□□□ 0.83
EGFR-209ENST00000463948 HUS1O60921 280 aa20.23■□□□□ 0.83
EGFR-209ENST00000463948 KRT19P08727 400 aa20.23■□□□□ 0.83
EGFR-209ENST00000463948 CYP2F1P24903 491 aa20.23■□□□□ 0.83
EGFR-209ENST00000463948 CCINQ13939 588 aa20.23■□□□□ 0.83
EGFR-209ENST00000463948 CCDC142Q17RM4 750 aa20.23■□□□□ 0.83
EGFR-209ENST00000463948 PKN3Q6P5Z2 889 aa20.23■□□□□ 0.83
EGFR-209ENST00000463948 CEP68Q76N32 757 aa20.23■□□□□ 0.83
EGFR-209ENST00000463948 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.23■□□□□ 0.83
EGFR-209ENST00000463948 C1orf127Q8N9H9 656 aa20.23■□□□□ 0.83
EGFR-209ENST00000463948 CACTINQ8WUQ7 758 aaKnown RBP20.23■□□□□ 0.83
EGFR-209ENST00000463948 DDX43Q9NXZ2 648 aaKnown RBP20.23■□□□□ 0.83
EGFR-209ENST00000463948 RBAKQ9NYW8 714 aaPredicted RBP20.23■□□□□ 0.83
EGFR-209ENST00000463948 SEL1LQ9UBV2 794 aa20.23■□□□□ 0.83
EGFR-209ENST00000463948 GTF3C4Q9UKN8 822 aa20.23■□□□□ 0.83
EGFR-209ENST00000463948 KIF26AQ9ULI4 1882 aaPredicted RBP20.23■□□□□ 0.83
EGFR-209ENST00000463948 L1RE1Q9UN81 338 aa20.23■□□□□ 0.83
EGFR-209ENST00000463948 PCDHB13Q9Y5F0 798 aa20.23■□□□□ 0.83
EGFR-209ENST00000463948 TSC2P49815 1807 aa20.23■□□□□ 0.83
EGFR-209ENST00000463948 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.22■□□□□ 0.83
EGFR-209ENST00000463948 HCRTO43612 131 aa20.22■□□□□ 0.83
EGFR-209ENST00000463948 PRPF6O94906 941 aaKnown RBP20.22■□□□□ 0.83
EGFR-209ENST00000463948 ARSAP15289 507 aa20.22■□□□□ 0.83
EGFR-209ENST00000463948 TXLNAP40222 546 aa20.22■□□□□ 0.83
EGFR-209ENST00000463948 PNPLA4P41247 253 aa20.22■□□□□ 0.83
EGFR-209ENST00000463948 CUL4AQ13619 759 aa20.22■□□□□ 0.83
EGFR-209ENST00000463948 RUNX3Q13761 415 aa20.22■□□□□ 0.83
EGFR-209ENST00000463948 OSTM1Q86WC4 334 aa20.22■□□□□ 0.83
EGFR-209ENST00000463948 NT5DC4Q86YG4 428 aa20.22■□□□□ 0.83
EGFR-209ENST00000463948 BRSK2Q8IWQ3 736 aa20.22■□□□□ 0.83
EGFR-209ENST00000463948 MRPS31Q92665 395 aaKnown RBP20.22■□□□□ 0.83
EGFR-209ENST00000463948 FAM83CQ9BQN1 747 aa20.22■□□□□ 0.83
EGFR-209ENST00000463948 CBWD1Q9BRT8 395 aa20.22■□□□□ 0.83
EGFR-209ENST00000463948 PDE11AQ9HCR9 933 aa20.22■□□□□ 0.83
EGFR-209ENST00000463948 HPS4Q9NQG7 708 aa20.22■□□□□ 0.83
EGFR-209ENST00000463948 SEMA4GQ9NTN9 838 aa20.22■□□□□ 0.83
EGFR-209ENST00000463948 TDP1Q9NUW8 608 aa20.22■□□□□ 0.83
EGFR-209ENST00000463948 POLR3BQ9NW08 1133 aaPredicted RBP20.22■□□□□ 0.83
EGFR-209ENST00000463948 PAPSS2O95340 614 aaPredicted RBP20.21■□□□□ 0.83
EGFR-209ENST00000463948 PDCP20941 246 aa20.21■□□□□ 0.83
EGFR-209ENST00000463948 RESTQ13127 1097 aa20.21■□□□□ 0.83
EGFR-209ENST00000463948 NFE2Q16621 373 aaPredicted RBP20.21■□□□□ 0.83
EGFR-209ENST00000463948 LMBRD2Q68DH5 695 aaPredicted RBP20.21■□□□□ 0.83
EGFR-209ENST00000463948 CC2D1AQ6P1N0 951 aaPredicted RBP20.21■□□□□ 0.83
EGFR-209ENST00000463948 MON1AQ86VX9 555 aa20.21■□□□□ 0.83
EGFR-209ENST00000463948 FAM160A2Q8N612 972 aaPredicted RBP20.21■□□□□ 0.83
EGFR-209ENST00000463948 CYP2S1Q96SQ9 504 aa20.21■□□□□ 0.83
EGFR-209ENST00000463948 FBRSL1Q9HCM7 1045 aaKnown RBP20.21■□□□□ 0.83
EGFR-209ENST00000463948 FOXD4L1Q9NU39 408 aa20.21■□□□□ 0.83
EGFR-209ENST00000463948 PANK4Q9NVE7 773 aa20.21■□□□□ 0.83
EGFR-209ENST00000463948 SNX9Q9Y5X1 595 aa20.21■□□□□ 0.83
EGFR-209ENST00000463948 NUP210Q8TEM1 1887 aaPredicted RBP20.2■□□□□ 0.82
EGFR-209ENST00000463948 A0A087X0B3 334 aa20.2■□□□□ 0.82
EGFR-209ENST00000463948 LDHAP00338 332 aaKnown RBP20.2■□□□□ 0.82
EGFR-209ENST00000463948 CSH1P0DML2 217 aa20.2■□□□□ 0.82
EGFR-209ENST00000463948 CSH2P0DML3 217 aa20.2■□□□□ 0.82
EGFR-209ENST00000463948 SYT1P21579 422 aa20.2■□□□□ 0.82
EGFR-209ENST00000463948 CNR2P34972 360 aa20.2■□□□□ 0.82
EGFR-209ENST00000463948 STAT6P42226 847 aa20.2■□□□□ 0.82
EGFR-209ENST00000463948 MYL7Q01449 175 aa20.2■□□□□ 0.82
EGFR-209ENST00000463948 GRSF1Q12849 480 aaKnown RBP eCLIP20.2■□□□□ 0.82
EGFR-209ENST00000463948 FSTL4Q6MZW2 842 aa20.2■□□□□ 0.82
EGFR-209ENST00000463948 CCDC73Q6ZRK6 1079 aa20.2■□□□□ 0.82
EGFR-209ENST00000463948 SCN4BQ8IWT1 228 aa20.2■□□□□ 0.82
EGFR-209ENST00000463948 SYNPOQ8N3V7 929 aa20.2■□□□□ 0.82
EGFR-209ENST00000463948 PDILTQ8N807 584 aa20.2■□□□□ 0.82
EGFR-209ENST00000463948 RIN3Q8TB24 985 aa20.2■□□□□ 0.82
EGFR-209ENST00000463948 ACBD6Q9BR61 282 aa20.2■□□□□ 0.82
EGFR-209ENST00000463948 RTKNQ9BST9 563 aa20.2■□□□□ 0.82
EGFR-209ENST00000463948 TRPC7Q9HCX4 862 aa20.2■□□□□ 0.82
EGFR-209ENST00000463948 RALGAPA1Q6GYQ0 2036 aa20.2■□□□□ 0.82
EGFR-209ENST00000463948 ZNF638Q14966 1978 aaKnown RBP20.19■□□□□ 0.82
EGFR-209ENST00000463948 AXIN1O15169 862 aa20.19■□□□□ 0.82
EGFR-209ENST00000463948 GDF9O60383 454 aa20.19■□□□□ 0.82
EGFR-209ENST00000463948 GARTP22102 1010 aa20.19■□□□□ 0.82
EGFR-209ENST00000463948 GALK1P51570 392 aa20.19■□□□□ 0.82
EGFR-209ENST00000463948 RPL10AP62906 217 aaKnown RBP20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms