RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 CDH8P55286 799 aa13.89□□□□□ -0.19
XRN1-203ENST00000463916 NCOA4Q13772 614 aa13.89□□□□□ -0.19
XRN1-203ENST00000463916 NFE2Q16621 373 aaPredicted RBP13.89□□□□□ -0.19
XRN1-203ENST00000463916 DDR2Q16832 855 aa13.89□□□□□ -0.19
XRN1-203ENST00000463916 ZACNQ401N2 412 aa13.89□□□□□ -0.19
XRN1-203ENST00000463916 ZNF658Q5TYW1 1059 aaPredicted RBP13.89□□□□□ -0.19
XRN1-203ENST00000463916 SV2AQ7L0J3 742 aa13.89□□□□□ -0.19
XRN1-203ENST00000463916 GPIHBP1Q8IV16 184 aa13.89□□□□□ -0.19
XRN1-203ENST00000463916 SUGP1Q8IWZ8 645 aaKnown RBP13.89□□□□□ -0.19
XRN1-203ENST00000463916 LEMD2Q8NC56 503 aa13.89□□□□□ -0.19
XRN1-203ENST00000463916 TMC2Q8TDI7 906 aa13.89□□□□□ -0.19
XRN1-203ENST00000463916 ASB16Q96NS5 453 aa13.89□□□□□ -0.19
XRN1-203ENST00000463916 MKNK1Q9BUB5 465 aa13.89□□□□□ -0.19
XRN1-203ENST00000463916 IL21Q9HBE4 155 aa13.89□□□□□ -0.19
XRN1-203ENST00000463916 WNT16Q9UBV4 365 aa13.89□□□□□ -0.19
XRN1-203ENST00000463916 FBXL21Q9UKT6 434 aa13.89□□□□□ -0.19
XRN1-203ENST00000463916 CA14Q9ULX7 337 aa13.89□□□□□ -0.19
XRN1-203ENST00000463916 ASB3Q9Y575 518 aa13.89□□□□□ -0.19
XRN1-203ENST00000463916 NCANO14594 1321 aa13.88□□□□□ -0.19
XRN1-203ENST00000463916 COL4A3Q01955 1670 aa13.88□□□□□ -0.19
XRN1-203ENST00000463916 STAU1O95793 577 aaKnown RBP13.88□□□□□ -0.19
XRN1-203ENST00000463916 TRIM49P0CI25 452 aa13.88□□□□□ -0.19
XRN1-203ENST00000463916 TRIM49CP0CI26 452 aa13.88□□□□□ -0.19
XRN1-203ENST00000463916 PCSK1P29120 753 aa13.88□□□□□ -0.19
XRN1-203ENST00000463916 AVPR2P30518 371 aa13.88□□□□□ -0.19
XRN1-203ENST00000463916 VIPR2P41587 438 aa13.88□□□□□ -0.19
XRN1-203ENST00000463916 VAMP7P51809 220 aa13.88□□□□□ -0.19
XRN1-203ENST00000463916 FAM200AQ8TCP9 573 aa13.88□□□□□ -0.19
XRN1-203ENST00000463916 SMARCE1Q969G3 411 aa13.88□□□□□ -0.19
XRN1-203ENST00000463916 SYT15Q9BQS2 421 aa13.88□□□□□ -0.19
XRN1-203ENST00000463916 DPEP3Q9H4B8 488 aa13.88□□□□□ -0.19
XRN1-203ENST00000463916 SLC2A4RGQ9NR83 387 aa13.88□□□□□ -0.19
XRN1-203ENST00000463916 RMND1Q9NWS8 449 aa13.88□□□□□ -0.19
XRN1-203ENST00000463916 CHMP5Q9NZZ3 219 aa13.88□□□□□ -0.19
XRN1-203ENST00000463916 KMT2EQ8IZD2 1858 aa13.88□□□□□ -0.19
XRN1-203ENST00000463916 IKBKBO14920 756 aa13.87□□□□□ -0.19
XRN1-203ENST00000463916 MAPK13O15264 365 aa13.87□□□□□ -0.19
XRN1-203ENST00000463916 PI15O43692 258 aa13.87□□□□□ -0.19
XRN1-203ENST00000463916 TACC1O75410 805 aa13.87□□□□□ -0.19
XRN1-203ENST00000463916 ECI2O75521 394 aa13.87□□□□□ -0.19
XRN1-203ENST00000463916 SMC2O95347 1197 aa13.87□□□□□ -0.19
XRN1-203ENST00000463916 HMGA1P17096 107 aaKnown RBP13.87□□□□□ -0.19
XRN1-203ENST00000463916 BMP6P22004 513 aa13.87□□□□□ -0.19
XRN1-203ENST00000463916 GABRR2P28476 465 aa13.87□□□□□ -0.19
XRN1-203ENST00000463916 ATICP31939 592 aa13.87□□□□□ -0.19
XRN1-203ENST00000463916 GNL1P36915 607 aaPredicted RBP13.87□□□□□ -0.19
XRN1-203ENST00000463916 AP3M2P53677 418 aa13.87□□□□□ -0.19
XRN1-203ENST00000463916 PPP3CAQ08209 521 aa13.87□□□□□ -0.19
XRN1-203ENST00000463916 CWF19L1Q69YN2 538 aaKnown RBP13.87□□□□□ -0.19
XRN1-203ENST00000463916 TMEM150AQ86TG1 271 aa13.87□□□□□ -0.19
XRN1-203ENST00000463916 ITIH5Q86UX2 942 aa13.87□□□□□ -0.19
XRN1-203ENST00000463916 FAM186BQ8IYM0 893 aa13.87□□□□□ -0.19
XRN1-203ENST00000463916 TMEM105Q8N8V8 129 aa13.87□□□□□ -0.19
XRN1-203ENST00000463916 ZSCAN18Q8TBC5 510 aaPredicted RBP13.87□□□□□ -0.19
XRN1-203ENST00000463916 SDCBP2Q9H190 292 aa13.87□□□□□ -0.19
XRN1-203ENST00000463916 SMYD3Q9H7B4 428 aa13.87□□□□□ -0.19
XRN1-203ENST00000463916 VRTNQ9H8Y1 702 aa13.87□□□□□ -0.19
XRN1-203ENST00000463916 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.87□□□□□ -0.191e-7■■■■■ 115.4
XRN1-203ENST00000463916 CDH9Q9ULB4 789 aa13.87□□□□□ -0.19
XRN1-203ENST00000463916 LRRN2O75325 713 aa13.87□□□□□ -0.19
XRN1-203ENST00000463916 CD44P16070 742 aaKnown RBP13.87□□□□□ -0.19
XRN1-203ENST00000463916 RPL13P26373 211 aaKnown RBP13.87□□□□□ -0.19
XRN1-203ENST00000463916 PSMC2P35998 433 aaKnown RBP13.87□□□□□ -0.19
XRN1-203ENST00000463916 RAP1GAPP47736 663 aa13.87□□□□□ -0.19
XRN1-203ENST00000463916 TNNC1P63316 161 aa13.87□□□□□ -0.19
XRN1-203ENST00000463916 ZNF699Q32M78 642 aa13.87□□□□□ -0.19
XRN1-203ENST00000463916 EDRF1Q3B7T1 1238 aa13.87□□□□□ -0.19
XRN1-203ENST00000463916 CFAP221Q4G0U5 840 aa13.87□□□□□ -0.19
XRN1-203ENST00000463916 COBLL1Q53SF7 1204 aa13.87□□□□□ -0.19
XRN1-203ENST00000463916 ANKRD40Q6AI12 368 aa13.87□□□□□ -0.19
XRN1-203ENST00000463916 ELOA2Q8IYF1 753 aaPredicted RBP13.87□□□□□ -0.19
XRN1-203ENST00000463916 FLCNQ8NFG4 579 aa13.87□□□□□ -0.19
XRN1-203ENST00000463916 OR6B3Q8NGW1 331 aa13.87□□□□□ -0.19
XRN1-203ENST00000463916 SMARCD2Q92925 531 aa13.87□□□□□ -0.19
XRN1-203ENST00000463916 SYAP1Q96A49 352 aaPredicted RBP13.87□□□□□ -0.19
XRN1-203ENST00000463916 ELSPBP1Q96BH3 223 aa13.87□□□□□ -0.19
XRN1-203ENST00000463916 RSPRY1Q96DX4 576 aa13.87□□□□□ -0.19
XRN1-203ENST00000463916 ATXN3LQ9H3M9 355 aa13.87□□□□□ -0.19
XRN1-203ENST00000463916 MFSD1Q9H3U5 465 aa13.87□□□□□ -0.19
XRN1-203ENST00000463916 ABCB6Q9NP58 842 aa13.87□□□□□ -0.19
XRN1-203ENST00000463916 MAN1B1Q9UKM7 699 aa13.87□□□□□ -0.19
XRN1-203ENST00000463916 USP34Q70CQ2 3546 aa13.86□□□□□ -0.19
XRN1-203ENST00000463916 TRIM49BA6NDI0 452 aa13.86□□□□□ -0.19
XRN1-203ENST00000463916 KINO60870 393 aaKnown RBP13.86□□□□□ -0.19
XRN1-203ENST00000463916 GCLMP48507 274 aa13.86□□□□□ -0.19
XRN1-203ENST00000463916 VEPH1Q14D04 833 aa13.86□□□□□ -0.19
XRN1-203ENST00000463916 SPOPLQ6IQ16 392 aa13.86□□□□□ -0.19
XRN1-203ENST00000463916 INTS8Q75QN2 995 aaKnown RBP13.86□□□□□ -0.19
XRN1-203ENST00000463916 SPATA2LQ8IUW3 424 aaPredicted RBP13.86□□□□□ -0.19
XRN1-203ENST00000463916 ADSSL1Q8N142 457 aa13.86□□□□□ -0.19
XRN1-203ENST00000463916 MYLPFQ96A32 169 aa13.86□□□□□ -0.19
XRN1-203ENST00000463916 PCED1BQ96HM7 432 aa13.86□□□□□ -0.19
XRN1-203ENST00000463916 SNX25Q9H3E2 840 aa13.86□□□□□ -0.19
XRN1-203ENST00000463916 SLITRK6Q9H5Y7 841 aa13.86□□□□□ -0.19
XRN1-203ENST00000463916 ZFP14Q9HCL3 533 aa13.86□□□□□ -0.19
XRN1-203ENST00000463916 BDNFP23560 247 aa13.86□□□□□ -0.19
XRN1-203ENST00000463916 MCCD1P59942 119 aaPredicted RBP13.86□□□□□ -0.19
XRN1-203ENST00000463916 CYP4F8P98187 520 aa13.86□□□□□ -0.19
XRN1-203ENST00000463916 GRM2Q14416 872 aa13.86□□□□□ -0.19
XRN1-203ENST00000463916 MDH1BQ5I0G3 518 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms