RNA–Protein interactions for RNA: ENST00000463908.2

LMNB1-204, Transcript of lamin B1, humanhuman

TSL 4

Gene LMNB1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-204ENST00000463908 GTPBP10A4D1E9 387 aaKnown RBP20.21■□□□□ 0.83
LMNB1-204ENST00000463908 PTPN1P18031 435 aaKnown RBP20.21■□□□□ 0.83
LMNB1-204ENST00000463908 CDK11BP21127 795 aaKnown RBP20.21■□□□□ 0.83
LMNB1-204ENST00000463908 PON1P27169 355 aa20.21■□□□□ 0.83
LMNB1-204ENST00000463908 ELF1P32519 619 aa20.21■□□□□ 0.83
LMNB1-204ENST00000463908 TSPY1Q01534 308 aa20.21■□□□□ 0.83
LMNB1-204ENST00000463908 CUL2Q13617 745 aa20.21■□□□□ 0.83
LMNB1-204ENST00000463908 LRSAM1Q6UWE0 723 aa20.21■□□□□ 0.83
LMNB1-204ENST00000463908 LUZP1Q86V48 1076 aa20.21■□□□□ 0.83
LMNB1-204ENST00000463908 ARHGEF19Q8IW93 802 aa20.21■□□□□ 0.83
LMNB1-204ENST00000463908 CRYBG2Q8N1P7 616 aa20.21■□□□□ 0.83
LMNB1-204ENST00000463908 TTC9BQ8N6N2 239 aa20.21■□□□□ 0.83
LMNB1-204ENST00000463908 UBR7Q8N806 425 aa20.21■□□□□ 0.83
LMNB1-204ENST00000463908 CMASQ8NFW8 434 aaPredicted RBP20.21■□□□□ 0.83
LMNB1-204ENST00000463908 KAT5Q92993 513 aa20.21■□□□□ 0.83
LMNB1-204ENST00000463908 NT5C1BQ96P26 610 aa20.21■□□□□ 0.83
LMNB1-204ENST00000463908 SFXN1Q9H9B4 322 aa20.21■□□□□ 0.83
LMNB1-204ENST00000463908 XIRP2A4UGR9 3374 aa20.21■□□□□ 0.83
LMNB1-204ENST00000463908 TNFRSF10AO00220 468 aa20.2■□□□□ 0.82
LMNB1-204ENST00000463908 MBTPS2O43462 519 aa20.2■□□□□ 0.82
LMNB1-204ENST00000463908 CILPO75339 1184 aa20.2■□□□□ 0.82
LMNB1-204ENST00000463908 CAVIN2O95810 425 aa20.2■□□□□ 0.82
LMNB1-204ENST00000463908 CD58P19256 250 aa20.2■□□□□ 0.82
LMNB1-204ENST00000463908 COPB1P53618 953 aaKnown RBP20.2■□□□□ 0.82
LMNB1-204ENST00000463908 SMARCB1Q12824 385 aa20.2■□□□□ 0.82
LMNB1-204ENST00000463908 ORC1Q13415 861 aa20.2■□□□□ 0.82
LMNB1-204ENST00000463908 EXOC3L4Q17RC7 722 aa20.2■□□□□ 0.82
LMNB1-204ENST00000463908 PPM1LQ5SGD2 360 aa20.2■□□□□ 0.82
LMNB1-204ENST00000463908 TRIM65Q6PJ69 517 aa20.2■□□□□ 0.82
LMNB1-204ENST00000463908 GBP6Q6ZN66 633 aa20.2■□□□□ 0.82
LMNB1-204ENST00000463908 CCDC149Q6ZUS6 474 aa20.2■□□□□ 0.82
LMNB1-204ENST00000463908 RTL10Q7L3V2 364 aa20.2■□□□□ 0.82
LMNB1-204ENST00000463908 RRAGAQ7L523 313 aa20.2■□□□□ 0.82
LMNB1-204ENST00000463908 GPR149Q86SP6 731 aa20.2■□□□□ 0.82
LMNB1-204ENST00000463908 UNC93AQ86WB7 457 aa20.2■□□□□ 0.82
LMNB1-204ENST00000463908 MYCBPAPQ8TBZ2 947 aa20.2■□□□□ 0.82
LMNB1-204ENST00000463908 SUSD6Q92537 303 aa20.2■□□□□ 0.82
LMNB1-204ENST00000463908 PRKD2Q9BZL6 878 aa20.2■□□□□ 0.82
LMNB1-204ENST00000463908 ELOVL4Q9GZR5 314 aa20.2■□□□□ 0.82
LMNB1-204ENST00000463908 CISHQ9NSE2 258 aa20.2■□□□□ 0.82
LMNB1-204ENST00000463908 ZDHHC7Q9NXF8 308 aa20.2■□□□□ 0.82
LMNB1-204ENST00000463908 GCNT4Q9P109 453 aa20.2■□□□□ 0.82
LMNB1-204ENST00000463908 BDP1A6H8Y1 2624 aa20.2■□□□□ 0.82
LMNB1-204ENST00000463908 BECN2A8MW95 431 aa20.19■□□□□ 0.82
LMNB1-204ENST00000463908 PRRG1O14668 218 aa20.19■□□□□ 0.82
LMNB1-204ENST00000463908 SOAT2O75908 522 aa20.19■□□□□ 0.82
LMNB1-204ENST00000463908 ACO1P21399 889 aaKnown RBP20.19■□□□□ 0.82
LMNB1-204ENST00000463908 KCNQ1P51787 676 aa20.19■□□□□ 0.82
LMNB1-204ENST00000463908 ITIH3Q06033 890 aa20.19■□□□□ 0.82
LMNB1-204ENST00000463908 NFE2Q16621 373 aaPredicted RBP20.19■□□□□ 0.82
LMNB1-204ENST00000463908 LIN9Q5TKA1 542 aa20.19■□□□□ 0.82
LMNB1-204ENST00000463908 ACOT1Q86TX2 421 aa20.19■□□□□ 0.82
LMNB1-204ENST00000463908 B3GALNT2Q8NCR0 500 aa20.19■□□□□ 0.82
LMNB1-204ENST00000463908 C2orf15Q8WU43 125 aaKnown RBP20.19■□□□□ 0.82
LMNB1-204ENST00000463908 ATXN2LQ8WWM7 1075 aaKnown RBP20.19■□□□□ 0.82
LMNB1-204ENST00000463908 PCED1BQ96HM7 432 aa20.19■□□□□ 0.82
LMNB1-204ENST00000463908 KREMEN1Q96MU8 473 aa20.19■□□□□ 0.82
LMNB1-204ENST00000463908 RHOBTB2Q9BYZ6 727 aa20.19■□□□□ 0.82
LMNB1-204ENST00000463908 SIX2Q9NPC8 291 aa20.19■□□□□ 0.82
LMNB1-204ENST00000463908 HSFX1Q9UBD0 423 aa20.19■□□□□ 0.82
LMNB1-204ENST00000463908 PCDHB5Q9Y5E4 795 aa20.19■□□□□ 0.82
LMNB1-204ENST00000463908 INSL5Q9Y5Q6 135 aa20.19■□□□□ 0.82
LMNB1-204ENST00000463908 MTCL1Q9Y4B5 1905 aaKnown RBP20.19■□□□□ 0.82
LMNB1-204ENST00000463908 CCL16O15467 120 aa20.18■□□□□ 0.82
LMNB1-204ENST00000463908 HNRNPA1P09651 372 aaKnown RBP eCLIP20.18■□□□□ 0.82
LMNB1-204ENST00000463908 HAPLN1P10915 354 aaPredicted RBP20.18■□□□□ 0.82
LMNB1-204ENST00000463908 CYP2F1P24903 491 aa20.18■□□□□ 0.82
LMNB1-204ENST00000463908 HOXA9P31269 272 aa20.18■□□□□ 0.82
LMNB1-204ENST00000463908 ZNF445P59923 1031 aa20.18■□□□□ 0.82
LMNB1-204ENST00000463908 SMAD4Q13485 552 aaKnown RBP20.18■□□□□ 0.82
LMNB1-204ENST00000463908 MDH1BQ5I0G3 518 aa20.18■□□□□ 0.82
LMNB1-204ENST00000463908 GJB7Q6PEY0 223 aa20.18■□□□□ 0.82
LMNB1-204ENST00000463908 ELMSAN1Q6PJG2 1045 aa20.18■□□□□ 0.82
LMNB1-204ENST00000463908 PAQR9Q6ZVX9 377 aa20.18■□□□□ 0.82
LMNB1-204ENST00000463908 PPM1KQ8N3J5 372 aa20.18■□□□□ 0.82
LMNB1-204ENST00000463908 SPPL2BQ8TCT7 592 aa20.18■□□□□ 0.82
LMNB1-204ENST00000463908 MYLPFQ96A32 169 aa20.18■□□□□ 0.82
LMNB1-204ENST00000463908 B3GNT5Q9BYG0 378 aa20.18■□□□□ 0.82
LMNB1-204ENST00000463908 TSPY26PQ9H489 355 aa20.18■□□□□ 0.82
LMNB1-204ENST00000463908 ABI2Q9NYB9 513 aaPredicted RBP20.18■□□□□ 0.82
LMNB1-204ENST00000463908 USP15Q9Y4E8 981 aaPredicted RBP20.18■□□□□ 0.82
LMNB1-204ENST00000463908 SPDYE4A6NLX3 237 aa20.17■□□□□ 0.82
LMNB1-204ENST00000463908 BMP1P13497 986 aa20.17■□□□□ 0.82
LMNB1-204ENST00000463908 COL9A1P20849 921 aa20.17■□□□□ 0.82
LMNB1-204ENST00000463908 TBXAS1P24557 533 aaPredicted RBP20.17■□□□□ 0.82
LMNB1-204ENST00000463908 RAD23BP54727 409 aa20.17■□□□□ 0.82
LMNB1-204ENST00000463908 MRPS5P82675 430 aaKnown RBP20.17■□□□□ 0.82
LMNB1-204ENST00000463908 GCNT1Q02742 428 aa20.17■□□□□ 0.82
LMNB1-204ENST00000463908 TWF1Q12792 350 aa20.17■□□□□ 0.82
LMNB1-204ENST00000463908 CFAP221Q4G0U5 840 aa20.17■□□□□ 0.82
LMNB1-204ENST00000463908 ZNF394Q53GI3 561 aa20.17■□□□□ 0.82
LMNB1-204ENST00000463908 PTCRAQ6ISU1 281 aaPredicted RBP20.17■□□□□ 0.82
LMNB1-204ENST00000463908 C12orf29Q8N999 325 aa20.17■□□□□ 0.82
LMNB1-204ENST00000463908 SLC4A11Q8NBS3 891 aa20.17■□□□□ 0.82
LMNB1-204ENST00000463908 FAM200AQ8TCP9 573 aa20.17■□□□□ 0.82
LMNB1-204ENST00000463908 TNIP3Q96KP6 325 aa20.17■□□□□ 0.82
LMNB1-204ENST00000463908 ASB2Q96Q27 587 aa20.17■□□□□ 0.82
LMNB1-204ENST00000463908 NT5C1AQ9BXI3 368 aa20.17■□□□□ 0.82
LMNB1-204ENST00000463908 FAM124BQ9H5Z6 455 aaPredicted RBP20.17■□□□□ 0.82
LMNB1-204ENST00000463908 UBE2TQ9NPD8 197 aaPredicted RBP20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms