RNA–Protein interactions for RNA: ENST00000462970.5

PSMD4-208, Transcript of proteasome 26S subunit, non-ATPase 4, human

TSL 5

Gene PSMD4, Length 900 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD4-208	ENST00000462970	RHO	P08100	348 aa		10.27	□□□□□ -0.77
PSMD4-208	ENST00000462970	HAPLN1	P10915	354 aa	Predicted RBP	10.27	□□□□□ -0.77
PSMD4-208	ENST00000462970	CD58	P19256	250 aa		10.27	□□□□□ -0.77
PSMD4-208	ENST00000462970	GTF2H1	P32780	548 aa		10.27	□□□□□ -0.77
PSMD4-208	ENST00000462970	TUFM	P49411	452 aa	Known RBP	10.27	□□□□□ -0.77
PSMD4-208	ENST00000462970	GPR15	P49685	360 aa		10.27	□□□□□ -0.77
PSMD4-208	ENST00000462970	NLRP12	P59046	1061 aa		10.27	□□□□□ -0.77
PSMD4-208	ENST00000462970	NOP14	P78316	857 aa	Known RBP	10.27	□□□□□ -0.77
PSMD4-208	ENST00000462970	LRMP	Q12912	555 aa		10.27	□□□□□ -0.77
PSMD4-208	ENST00000462970	ORC1	Q13415	861 aa		10.27	□□□□□ -0.77
PSMD4-208	ENST00000462970	NFE2	Q16621	373 aa	Predicted RBP	10.27	□□□□□ -0.77
PSMD4-208	ENST00000462970	DPCR1	Q3MIW9	517 aa		10.27	□□□□□ -0.77
PSMD4-208	ENST00000462970	WDR44	Q5JSH3	913 aa		10.27	□□□□□ -0.77
PSMD4-208	ENST00000462970	CYP4A22	Q5TCH4	519 aa		10.27	□□□□□ -0.77
PSMD4-208	ENST00000462970	SDHAF4	Q5VUM1	108 aa		10.27	□□□□□ -0.77
PSMD4-208	ENST00000462970	KRT39	Q6A163	491 aa		10.27	□□□□□ -0.77
PSMD4-208	ENST00000462970	PDZD4	Q76G19	769 aa	Predicted RBP	10.27	□□□□□ -0.77
PSMD4-208	ENST00000462970	RTL10	Q7L3V2	364 aa		10.27	□□□□□ -0.77
PSMD4-208	ENST00000462970	FILIP1	Q7Z7B0	1213 aa		10.27	□□□□□ -0.77
PSMD4-208	ENST00000462970	ZC3H3	Q8IXZ2	948 aa	Known RBP	10.27	□□□□□ -0.77
PSMD4-208	ENST00000462970	MLKL	Q8NB16	471 aa		10.27	□□□□□ -0.77
PSMD4-208	ENST00000462970	STKLD1	Q8NE28	680 aa		10.27	□□□□□ -0.77
PSMD4-208	ENST00000462970	FBXL13	Q8NEE6	735 aa		10.27	□□□□□ -0.77
PSMD4-208	ENST00000462970	ITFG1	Q8TB96	612 aa		10.27	□□□□□ -0.77
PSMD4-208	ENST00000462970	SPPL2B	Q8TCT7	592 aa		10.27	□□□□□ -0.77
PSMD4-208	ENST00000462970	C2orf15	Q8WU43	125 aa	Known RBP	10.27	□□□□□ -0.77
PSMD4-208	ENST00000462970	TAF4B	Q92750	862 aa		10.27	□□□□□ -0.77
PSMD4-208	ENST00000462970	MCRS1	Q96EZ8	462 aa		10.27	□□□□□ -0.77
PSMD4-208	ENST00000462970	MED10	Q9BTT4	135 aa		10.27	□□□□□ -0.77
PSMD4-208	ENST00000462970	DPEP3	Q9H4B8	488 aa		10.27	□□□□□ -0.77
PSMD4-208	ENST00000462970	SLITRK6	Q9H5Y7	841 aa		10.27	□□□□□ -0.77
PSMD4-208	ENST00000462970	METTL14	Q9HCE5	456 aa	Known RBP	10.27	□□□□□ -0.77
PSMD4-208	ENST00000462970	ASAH2	Q9NR71	780 aa		10.27	□□□□□ -0.77
PSMD4-208	ENST00000462970	CEP72	Q9P209	647 aa		10.27	□□□□□ -0.77
PSMD4-208	ENST00000462970	DACH1	Q9UI36	760 aa		10.27	□□□□□ -0.77
PSMD4-208	ENST00000462970	RWDD2A	Q9UIY3	292 aa		10.27	□□□□□ -0.77
PSMD4-208	ENST00000462970	CDH9	Q9ULB4	789 aa		10.27	□□□□□ -0.77
PSMD4-208	ENST00000462970	PTPRD	P23468	1912 aa		10.27	□□□□□ -0.77
PSMD4-208	ENST00000462970	MYBPHL	A2RUH7	354 aa		10.26	□□□□□ -0.77
PSMD4-208	ENST00000462970	GABRD	O14764	452 aa		10.26	□□□□□ -0.77
PSMD4-208	ENST00000462970	DCX	O43602	365 aa		10.26	□□□□□ -0.77
PSMD4-208	ENST00000462970	N4BP1	O75113	896 aa	Known RBP	10.26	□□□□□ -0.77
PSMD4-208	ENST00000462970	LRRN2	O75325	713 aa		10.26	□□□□□ -0.77
PSMD4-208	ENST00000462970	TACC1	O75410	805 aa		10.26	□□□□□ -0.77
PSMD4-208	ENST00000462970	STAU1	O95793	577 aa	Known RBP	10.26	□□□□□ -0.77
PSMD4-208	ENST00000462970	ASS1	P00966	412 aa	Known RBP	10.26	□□□□□ -0.77
PSMD4-208	ENST00000462970	CCDC192	P0DO97	292 aa		10.26	□□□□□ -0.77
PSMD4-208	ENST00000462970	GJA1	P17302	382 aa		10.26	□□□□□ -0.77
PSMD4-208	ENST00000462970	CEBPB	P17676	345 aa		10.26	□□□□□ -0.77
PSMD4-208	ENST00000462970	PTPN1	P18031	435 aa	Known RBP	10.26	□□□□□ -0.77
PSMD4-208	ENST00000462970	CYP2F1	P24903	491 aa		10.26	□□□□□ -0.77
PSMD4-208	ENST00000462970	MTIF2	P46199	727 aa	Known RBP	10.26	□□□□□ -0.77
PSMD4-208	ENST00000462970	SMARCB1	Q12824	385 aa		10.26	□□□□□ -0.77
PSMD4-208	ENST00000462970	DDR2	Q16832	855 aa		10.26	□□□□□ -0.77
PSMD4-208	ENST00000462970	SLC5A9	Q2M3M2	681 aa		10.26	□□□□□ -0.77
PSMD4-208	ENST00000462970	CBWD6	Q4V339	395 aa		10.26	□□□□□ -0.77
PSMD4-208	ENST00000462970	HSP90AA4P	Q58FG1	418 aa		10.26	□□□□□ -0.77
PSMD4-208	ENST00000462970	CBWD3	Q5JTY5	395 aa		10.26	□□□□□ -0.77
PSMD4-208	ENST00000462970	CBWD5	Q5RIA9	395 aa		10.26	□□□□□ -0.77
PSMD4-208	ENST00000462970	SASS6	Q6UVJ0	657 aa		10.26	□□□□□ -0.77
PSMD4-208	ENST00000462970	C4orf50	Q6ZRC1	276 aa		10.26	□□□□□ -0.77
PSMD4-208	ENST00000462970	FRMD5	Q7Z6J6	570 aa		10.26	□□□□□ -0.77
PSMD4-208	ENST00000462970	ACOT1	Q86TX2	421 aa		10.26	□□□□□ -0.77
PSMD4-208	ENST00000462970	ITIH5	Q86UX2	942 aa		10.26	□□□□□ -0.77
PSMD4-208	ENST00000462970	SPATA18	Q8TC71	538 aa		10.26	□□□□□ -0.77
PSMD4-208	ENST00000462970	SEMA4D	Q92854	862 aa		10.26	□□□□□ -0.77
PSMD4-208	ENST00000462970	MYLPF	Q96A32	169 aa		10.26	□□□□□ -0.77
PSMD4-208	ENST00000462970	TCEAL4	Q96EI5	215 aa		10.26	□□□□□ -0.77
PSMD4-208	ENST00000462970	NIF3L1	Q9GZT8	377 aa		10.26	□□□□□ -0.77
PSMD4-208	ENST00000462970	SDCBP2	Q9H190	292 aa		10.26	□□□□□ -0.77
PSMD4-208	ENST00000462970	CRTAC1	Q9NQ79	661 aa		10.26	□□□□□ -0.77
PSMD4-208	ENST00000462970	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	10.26	□□□□□ -0.77
PSMD4-208	ENST00000462970	MAGEC2	Q9UBF1	373 aa	Predicted RBP	10.26	□□□□□ -0.77
PSMD4-208	ENST00000462970	MAGED2	Q9UNF1	606 aa	Predicted RBP	10.26	□□□□□ -0.77
PSMD4-208	ENST00000462970	MUC3A	Q02505	3323 aa		10.26	□□□□□ -0.77
PSMD4-208	ENST00000462970	CLDN5	O00501	218 aa		10.25	□□□□□ -0.77
PSMD4-208	ENST00000462970	ZNF197	O14709	1029 aa		10.25	□□□□□ -0.77
PSMD4-208	ENST00000462970	GNA14	O95837	355 aa		10.25	□□□□□ -0.77
PSMD4-208	ENST00000462970	ALAD	P13716	330 aa		10.25	□□□□□ -0.77
PSMD4-208	ENST00000462970	ATF6	P18850	670 aa		10.25	□□□□□ -0.77
PSMD4-208	ENST00000462970	TRIM21	P19474	475 aa	Known RBP	10.25	□□□□□ -0.77
PSMD4-208	ENST00000462970	BDNF	P23560	247 aa		10.25	□□□□□ -0.77
PSMD4-208	ENST00000462970	ANXA13	P27216	316 aa		10.25	□□□□□ -0.77
PSMD4-208	ENST00000462970	GRIK1	P39086	918 aa		10.25	□□□□□ -0.77
PSMD4-208	ENST00000462970	NDST1	P52848	882 aa		10.25	□□□□□ -0.77
PSMD4-208	ENST00000462970	RPL10A	P62906	217 aa	Known RBP	10.25	□□□□□ -0.77
PSMD4-208	ENST00000462970	ENPEP	Q07075	957 aa		10.25	□□□□□ -0.77
PSMD4-208	ENST00000462970	IFRD2	Q12894	506 aa	Predicted RBP	10.25	□□□□□ -0.77
PSMD4-208	ENST00000462970	MAPRE1	Q15691	268 aa	Known RBP	10.25	□□□□□ -0.77
PSMD4-208	ENST00000462970	CCDC183	Q5T5S1	534 aa		10.25	□□□□□ -0.77
PSMD4-208	ENST00000462970	LIMS2	Q7Z4I7	341 aa		10.25	□□□□□ -0.77
PSMD4-208	ENST00000462970	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	10.25	□□□□□ -0.77
PSMD4-208	ENST00000462970	ZDHHC14	Q8IZN3	488 aa		10.25	□□□□□ -0.77
PSMD4-208	ENST00000462970	RSAD2	Q8WXG1	361 aa		10.25	□□□□□ -0.77
PSMD4-208	ENST00000462970	FGF13	Q92913	245 aa		10.25	□□□□□ -0.77
PSMD4-208	ENST00000462970	SLC35C1	Q96A29	364 aa		10.25	□□□□□ -0.77
PSMD4-208	ENST00000462970	CNOT6L	Q96LI5	555 aa	Known RBP	10.25	□□□□□ -0.77
PSMD4-208	ENST00000462970	GCNA	Q96QF7	691 aa		10.25	□□□□□ -0.77
PSMD4-208	ENST00000462970	LRFN3	Q9BTN0	628 aa		10.25	□□□□□ -0.77
PSMD4-208	ENST00000462970	C1QTNF1	Q9BXJ1	281 aa		10.25	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms