RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 CCR2P41597 374 aa9.51□□□□□ -0.89
LDB1-203ENST00000461873 PDE6CP51160 858 aa9.51□□□□□ -0.89
LDB1-203ENST00000461873 CDR1P51861 262 aa9.51□□□□□ -0.89
LDB1-203ENST00000461873 CYP27A1Q02318 531 aa9.51□□□□□ -0.89
LDB1-203ENST00000461873 CSTF1Q05048 431 aaKnown RBP9.51□□□□□ -0.89
LDB1-203ENST00000461873 DNM1Q05193 864 aaKnown RBP9.51□□□□□ -0.89
LDB1-203ENST00000461873 PSMD2Q13200 908 aa9.51□□□□□ -0.89
LDB1-203ENST00000461873 BIRC3Q13489 604 aa9.51□□□□□ -0.89
LDB1-203ENST00000461873 INTS6LQ5JSJ4 861 aaKnown RBP9.51□□□□□ -0.89
LDB1-203ENST00000461873 LMBRD2Q68DH5 695 aaPredicted RBP9.51□□□□□ -0.89
LDB1-203ENST00000461873 CNNM4Q6P4Q7 775 aa9.51□□□□□ -0.89
LDB1-203ENST00000461873 VITQ6UXI7 678 aa9.51□□□□□ -0.89
LDB1-203ENST00000461873 PDCL2Q8N4E4 241 aa9.51□□□□□ -0.89
LDB1-203ENST00000461873 CELF5Q8N6W0 485 aaKnown RBP9.51□□□□□ -0.89
LDB1-203ENST00000461873 C1orf127Q8N9H9 656 aa9.51□□□□□ -0.89
LDB1-203ENST00000461873 OR6B3Q8NGW1 331 aa9.51□□□□□ -0.89
LDB1-203ENST00000461873 ZNF507Q8TCN5 953 aa9.51□□□□□ -0.89
LDB1-203ENST00000461873 BPIFB1Q8TDL5 484 aa9.51□□□□□ -0.89
LDB1-203ENST00000461873 LPIN3Q9BQK8 851 aa9.51□□□□□ -0.89
LDB1-203ENST00000461873 IER2Q9BTL4 223 aa9.51□□□□□ -0.89
LDB1-203ENST00000461873 PLA2G2FQ9BZM2 168 aa9.51□□□□□ -0.89
LDB1-203ENST00000461873 IKZF4Q9H2S9 585 aa9.51□□□□□ -0.89
LDB1-203ENST00000461873 SLC39A2Q9NP94 309 aa9.51□□□□□ -0.89
LDB1-203ENST00000461873 INTS13Q9NVM9 706 aa9.51□□□□□ -0.89
LDB1-203ENST00000461873 FBXO4Q9UKT5 387 aa9.51□□□□□ -0.89
LDB1-203ENST00000461873 FRMD4BQ9Y2L6 1034 aa9.51□□□□□ -0.89
LDB1-203ENST00000461873 NOTCH4Q99466 2003 aa9.5□□□□□ -0.89
LDB1-203ENST00000461873 PRR23AA6NEV1 266 aa9.5□□□□□ -0.89
LDB1-203ENST00000461873 CALUO43852 315 aaPredicted RBP9.5□□□□□ -0.89
LDB1-203ENST00000461873 MYL1P05976 194 aa9.5□□□□□ -0.89
LDB1-203ENST00000461873 SLFN14P0C7P3 912 aa9.5□□□□□ -0.89
LDB1-203ENST00000461873 ACAT1P24752 427 aaKnown RBP9.5□□□□□ -0.89
LDB1-203ENST00000461873 GNL1P36915 607 aaPredicted RBP9.5□□□□□ -0.89
LDB1-203ENST00000461873 SYKP43405 635 aa9.5□□□□□ -0.89
LDB1-203ENST00000461873 CCR3P51677 355 aa9.5□□□□□ -0.89
LDB1-203ENST00000461873 AP3M2P53677 418 aa9.5□□□□□ -0.89
LDB1-203ENST00000461873 CYP4F8P98187 520 aa9.5□□□□□ -0.89
LDB1-203ENST00000461873 E2F4Q16254 413 aa9.5□□□□□ -0.89
LDB1-203ENST00000461873 KNOP1Q1ED39 458 aaKnown RBP9.5□□□□□ -0.89
LDB1-203ENST00000461873 RESP18Q5W5W9 173 aa9.5□□□□□ -0.89
LDB1-203ENST00000461873 CBWD2Q8IUF1 395 aa9.5□□□□□ -0.89
LDB1-203ENST00000461873 GPIHBP1Q8IV16 184 aa9.5□□□□□ -0.89
LDB1-203ENST00000461873 ADSSL1Q8N142 457 aa9.5□□□□□ -0.89
LDB1-203ENST00000461873 TMEM130Q8N3G9 435 aa9.5□□□□□ -0.89
LDB1-203ENST00000461873 CCDC150Q8NCX0 1101 aa9.5□□□□□ -0.89
LDB1-203ENST00000461873 HPS3Q969F9 1004 aa9.5□□□□□ -0.89
LDB1-203ENST00000461873 SYAP1Q96A49 352 aaPredicted RBP9.5□□□□□ -0.89
LDB1-203ENST00000461873 FUBP3Q96I24 572 aaKnown RBP eCLIP9.5□□□□□ -0.89
LDB1-203ENST00000461873 ZSWIM3Q96MP5 696 aa9.5□□□□□ -0.89
LDB1-203ENST00000461873 SCAND2PQ9GZW5 306 aaPredicted RBP9.5□□□□□ -0.89
LDB1-203ENST00000461873 LMAN1LQ9HAT1 526 aa9.5□□□□□ -0.89
LDB1-203ENST00000461873 TRPV4Q9HBA0 871 aa9.5□□□□□ -0.89
LDB1-203ENST00000461873 TRPC7Q9HCX4 862 aa9.5□□□□□ -0.89
LDB1-203ENST00000461873 ABCB6Q9NP58 842 aa9.5□□□□□ -0.89
LDB1-203ENST00000461873 TRPV5Q9NQA5 729 aa9.5□□□□□ -0.89
LDB1-203ENST00000461873 AGPAT3Q9NRZ7 376 aa9.5□□□□□ -0.89
LDB1-203ENST00000461873 GDAP2Q9NXN4 497 aa9.5□□□□□ -0.89
LDB1-203ENST00000461873 OBP2AQ9NY56 170 aa9.5□□□□□ -0.89
LDB1-203ENST00000461873 NCDNQ9UBB6 729 aa9.5□□□□□ -0.89
LDB1-203ENST00000461873 GTF3C4Q9UKN8 822 aa9.5□□□□□ -0.89
LDB1-203ENST00000461873 CDH9Q9ULB4 789 aa9.5□□□□□ -0.89
LDB1-203ENST00000461873 L1RE1Q9UN81 338 aa9.5□□□□□ -0.89
LDB1-203ENST00000461873 ATP8B3O60423 1300 aa9.5□□□□□ -0.89
LDB1-203ENST00000461873 TRAV19A0A0A6YYK7 116 aa9.49□□□□□ -0.89
LDB1-203ENST00000461873 SLC38A8A6NNN8 435 aa9.49□□□□□ -0.89
LDB1-203ENST00000461873 SOBPA7XYQ1 873 aa9.49□□□□□ -0.89
LDB1-203ENST00000461873 A8MXQ7 604 aa9.49□□□□□ -0.89
LDB1-203ENST00000461873 TRIM66O15016 1216 aa9.49□□□□□ -0.89
LDB1-203ENST00000461873 ABL1P00519 1130 aa9.49□□□□□ -0.89
LDB1-203ENST00000461873 CKMP06732 381 aa9.49□□□□□ -0.89
LDB1-203ENST00000461873 PDGFRBP09619 1106 aa9.49□□□□□ -0.89
LDB1-203ENST00000461873 SP9P0CG40 484 aa9.49□□□□□ -0.89
LDB1-203ENST00000461873 CCNE1P24864 410 aa9.49□□□□□ -0.89
LDB1-203ENST00000461873 TARSP26639 723 aaKnown RBP9.49□□□□□ -0.89
LDB1-203ENST00000461873 ATICP31939 592 aa9.49□□□□□ -0.89
LDB1-203ENST00000461873 RPS9P46781 194 aaKnown RBP9.49□□□□□ -0.89
LDB1-203ENST00000461873 NR1H3Q13133 447 aa9.49□□□□□ -0.89
LDB1-203ENST00000461873 CUL4BQ13620 913 aa9.49□□□□□ -0.89
LDB1-203ENST00000461873 KCNB1Q14721 858 aa9.49□□□□□ -0.89
LDB1-203ENST00000461873 DDR2Q16832 855 aa9.49□□□□□ -0.89
LDB1-203ENST00000461873 ZNF528Q3MIS6 628 aa9.49□□□□□ -0.89
LDB1-203ENST00000461873 WDR72Q3MJ13 1102 aa9.49□□□□□ -0.89
LDB1-203ENST00000461873 DGKKQ5KSL6 1271 aa9.49□□□□□ -0.89
LDB1-203ENST00000461873 TRAPPC11Q7Z392 1133 aa9.49□□□□□ -0.89
LDB1-203ENST00000461873 TMC8Q8IU68 726 aa9.49□□□□□ -0.89
LDB1-203ENST00000461873 MAB21L3Q8N8X9 362 aa9.49□□□□□ -0.89
LDB1-203ENST00000461873 LEO1Q8WVC0 666 aaPredicted RBP9.49□□□□□ -0.89
LDB1-203ENST00000461873 CGRRF1Q99675 332 aa9.49□□□□□ -0.89
LDB1-203ENST00000461873 SYT15Q9BQS2 421 aa9.49□□□□□ -0.89
LDB1-203ENST00000461873 DDX23Q9BUQ8 820 aaKnown RBP9.49□□□□□ -0.89
LDB1-203ENST00000461873 FAM126AQ9BYI3 521 aaPredicted RBP9.49□□□□□ -0.89
LDB1-203ENST00000461873 IMPG2Q9BZV3 1241 aa9.49□□□□□ -0.89
LDB1-203ENST00000461873 DNAJC25Q9H1X3 360 aa9.49□□□□□ -0.89
LDB1-203ENST00000461873 CRISPLD1Q9H336 500 aa9.49□□□□□ -0.89
LDB1-203ENST00000461873 KIF9Q9HAQ2 790 aa9.49□□□□□ -0.89
LDB1-203ENST00000461873 NXF1Q9UBU9 619 aaKnown RBP9.49□□□□□ -0.89
LDB1-203ENST00000461873 SERTAD1Q9UHV2 236 aa9.49□□□□□ -0.89
LDB1-203ENST00000461873 RCOR1Q9UKL0 485 aa9.49□□□□□ -0.89
LDB1-203ENST00000461873 R4GN57 208 aa9.49□□□□□ -0.89
LDB1-203ENST00000461873 A0A1B0GVL5 298 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms