RNA–Protein interactions for RNA: ENST00000461869.5

SF3A3-203, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-203ENST00000461869 GMEB2Q9UKD1 530 aa16.71■□□□□ 0.27
SF3A3-203ENST00000461869 DMXL1Q9Y485 3027 aa16.71■□□□□ 0.27
SF3A3-203ENST00000461869 H7C4K7 107 aa16.7■□□□□ 0.26
SF3A3-203ENST00000461869 SYN3O14994 580 aa16.7■□□□□ 0.26
SF3A3-203ENST00000461869 MICAL2O94851 1124 aa16.7■□□□□ 0.26
SF3A3-203ENST00000461869 SEC24AO95486 1093 aa16.7■□□□□ 0.26
SF3A3-203ENST00000461869 NRLP54845 237 aa16.7■□□□□ 0.26
SF3A3-203ENST00000461869 KCNA1Q09470 495 aa16.7■□□□□ 0.26
SF3A3-203ENST00000461869 PPP2R5DQ14738 602 aa16.7■□□□□ 0.26
SF3A3-203ENST00000461869 MAN2A1Q16706 1144 aa16.7■□□□□ 0.26
SF3A3-203ENST00000461869 XKR4Q5GH76 650 aa16.7■□□□□ 0.26
SF3A3-203ENST00000461869 CYP4A22Q5TCH4 519 aa16.7■□□□□ 0.26
SF3A3-203ENST00000461869 CREBRFQ8IUR6 639 aa16.7■□□□□ 0.26
SF3A3-203ENST00000461869 ZNF687Q8N1G0 1237 aa16.7■□□□□ 0.26
SF3A3-203ENST00000461869 ELMOD1Q8N336 334 aa16.7■□□□□ 0.26
SF3A3-203ENST00000461869 IRF7Q92985 503 aa16.7■□□□□ 0.26
SF3A3-203ENST00000461869 BICD1Q96G01 975 aa16.7■□□□□ 0.26
SF3A3-203ENST00000461869 ASB16Q96NS5 453 aa16.7■□□□□ 0.26
SF3A3-203ENST00000461869 TUBGCP2Q9BSJ2 902 aa16.7■□□□□ 0.26
SF3A3-203ENST00000461869 CDT1Q9H211 546 aa16.7■□□□□ 0.26
SF3A3-203ENST00000461869 CHRDQ9H2X0 955 aa16.7■□□□□ 0.26
SF3A3-203ENST00000461869 FBXL5Q9UKA1 691 aa16.7■□□□□ 0.26
SF3A3-203ENST00000461869 RAB23Q9ULC3 237 aa16.7■□□□□ 0.26
SF3A3-203ENST00000461869 FRMD4BQ9Y2L6 1034 aa16.7■□□□□ 0.26
SF3A3-203ENST00000461869 NUB1Q9Y5A7 615 aa16.7■□□□□ 0.26
SF3A3-203ENST00000461869 INSL5Q9Y5Q6 135 aa16.7■□□□□ 0.26
SF3A3-203ENST00000461869 ZNF292O60281 2723 aa16.7■□□□□ 0.26
SF3A3-203ENST00000461869 LGALS16A8MUM7 142 aa16.69■□□□□ 0.26
SF3A3-203ENST00000461869 NRG2O14511 850 aaPredicted RBP16.69■□□□□ 0.26
SF3A3-203ENST00000461869 HNRNPDLO14979 420 aaKnown RBP16.69■□□□□ 0.26
SF3A3-203ENST00000461869 KIAA0391O15091 583 aaKnown RBP16.69■□□□□ 0.26
SF3A3-203ENST00000461869 PIGRP01833 764 aa16.69■□□□□ 0.26
SF3A3-203ENST00000461869 PTMAP06454 111 aaKnown RBP16.69■□□□□ 0.26
SF3A3-203ENST00000461869 PSMC3P17980 439 aa16.69■□□□□ 0.26
SF3A3-203ENST00000461869 TGM1P22735 817 aa16.69■□□□□ 0.26
SF3A3-203ENST00000461869 CCR2P41597 374 aa16.69■□□□□ 0.26
SF3A3-203ENST00000461869 ZNF568Q3ZCX4 644 aa16.69■□□□□ 0.26
SF3A3-203ENST00000461869 CTXN3Q4LDR2 81 aa16.69■□□□□ 0.26
SF3A3-203ENST00000461869 IQCEQ6IPM2 695 aa16.69■□□□□ 0.26
SF3A3-203ENST00000461869 ARMCX5Q6P1M9 558 aa16.69■□□□□ 0.26
SF3A3-203ENST00000461869 APTXQ7Z2E3 356 aaKnown RBP16.69■□□□□ 0.26
SF3A3-203ENST00000461869 FAM3CQ92520 227 aa16.69■□□□□ 0.26
SF3A3-203ENST00000461869 ZSWIM3Q96MP5 696 aa16.69■□□□□ 0.26
SF3A3-203ENST00000461869 ZMAT2Q96NC0 199 aaKnown RBP16.69■□□□□ 0.26
SF3A3-203ENST00000461869 ACO2Q99798 780 aaKnown RBP16.69■□□□□ 0.26
SF3A3-203ENST00000461869 RTKNQ9BST9 563 aa16.69■□□□□ 0.26
SF3A3-203ENST00000461869 IER2Q9BTL4 223 aa16.69■□□□□ 0.26
SF3A3-203ENST00000461869 LMAN1LQ9HAT1 526 aa16.69■□□□□ 0.26
SF3A3-203ENST00000461869 ZNF334Q9HCZ1 680 aaPredicted RBP16.69■□□□□ 0.26
SF3A3-203ENST00000461869 PTPRHQ9HD43 1115 aa16.69■□□□□ 0.26
SF3A3-203ENST00000461869 TAB2Q9NYJ8 693 aa16.69■□□□□ 0.26
SF3A3-203ENST00000461869 DCDC2BA2VCK2 349 aa16.68■□□□□ 0.26
SF3A3-203ENST00000461869 GARTP22102 1010 aa16.68■□□□□ 0.26
SF3A3-203ENST00000461869 GDI1P31150 447 aa16.68■□□□□ 0.26
SF3A3-203ENST00000461869 PSMC2P35998 433 aaKnown RBP16.68■□□□□ 0.26
SF3A3-203ENST00000461869 LIG4P49917 911 aa16.68■□□□□ 0.26
SF3A3-203ENST00000461869 MRPL58Q14197 206 aaKnown RBP16.68■□□□□ 0.26
SF3A3-203ENST00000461869 NR1I3Q14994 352 aa16.68■□□□□ 0.26
SF3A3-203ENST00000461869 LPAL2Q16609 132 aa16.68■□□□□ 0.26
SF3A3-203ENST00000461869 FKBP15Q5T1M5 1219 aa16.68■□□□□ 0.26
SF3A3-203ENST00000461869 TPGS2Q68CL5 300 aa16.68■□□□□ 0.26
SF3A3-203ENST00000461869 VITQ6UXI7 678 aa16.68■□□□□ 0.26
SF3A3-203ENST00000461869 MAMSTRQ6ZN01 415 aa16.68■□□□□ 0.26
SF3A3-203ENST00000461869 HS6ST3Q8IZP7 471 aa16.68■□□□□ 0.26
SF3A3-203ENST00000461869 SMARCD2Q92925 531 aa16.68■□□□□ 0.26
SF3A3-203ENST00000461869 TRIM44Q96DX7 344 aaPredicted RBP16.68■□□□□ 0.26
SF3A3-203ENST00000461869 ZNF512Q96ME7 567 aaPredicted RBP16.68■□□□□ 0.26
SF3A3-203ENST00000461869 ACAP3Q96P50 834 aa16.68■□□□□ 0.26
SF3A3-203ENST00000461869 MRPL4Q9BYD3 311 aaKnown RBP16.68■□□□□ 0.26
SF3A3-203ENST00000461869 PARD6AQ9NPB6 346 aa16.68■□□□□ 0.26
SF3A3-203ENST00000461869 TRPV5Q9NQA5 729 aa16.68■□□□□ 0.26
SF3A3-203ENST00000461869 RTN4Q9NQC3 1192 aaKnown RBP16.68■□□□□ 0.26
SF3A3-203ENST00000461869 IMPACTQ9P2X3 320 aa16.68■□□□□ 0.26
SF3A3-203ENST00000461869 ARMCX3Q9UH62 379 aaPredicted RBP16.68■□□□□ 0.26
SF3A3-203ENST00000461869 PES1O00541 588 aaKnown RBP16.67■□□□□ 0.26
SF3A3-203ENST00000461869 CLIC2O15247 247 aa16.67■□□□□ 0.26
SF3A3-203ENST00000461869 MAPK13O15264 365 aa16.67■□□□□ 0.26
SF3A3-203ENST00000461869 EXOC3O60645 756 aa16.67■□□□□ 0.26
SF3A3-203ENST00000461869 TDGF1P13385 188 aa16.67■□□□□ 0.26
SF3A3-203ENST00000461869 KCNE1P15382 129 aa16.67■□□□□ 0.26
SF3A3-203ENST00000461869 RPL9P32969 192 aaKnown RBP16.67■□□□□ 0.26
SF3A3-203ENST00000461869 VIPR2P41587 438 aa16.67■□□□□ 0.26
SF3A3-203ENST00000461869 CCR3P51677 355 aa16.67■□□□□ 0.26
SF3A3-203ENST00000461869 TWF1Q12792 350 aa16.67■□□□□ 0.26
SF3A3-203ENST00000461869 CEP135Q66GS9 1140 aa16.67■□□□□ 0.26
SF3A3-203ENST00000461869 SLFN12LQ6IEE8 588 aa16.67■□□□□ 0.26
SF3A3-203ENST00000461869 ZPBP2Q6X784 338 aa16.67■□□□□ 0.26
SF3A3-203ENST00000461869 VSTM4Q8IW00 320 aa16.67■□□□□ 0.26
SF3A3-203ENST00000461869 FAM186BQ8IYM0 893 aa16.67■□□□□ 0.26
SF3A3-203ENST00000461869 CELF5Q8N6W0 485 aaKnown RBP16.67■□□□□ 0.26
SF3A3-203ENST00000461869 XXYLT1Q8NBI6 393 aa16.67■□□□□ 0.26
SF3A3-203ENST00000461869 DEPDC1BQ8WUY9 529 aa16.67■□□□□ 0.26
SF3A3-203ENST00000461869 C18orf25Q96B23 403 aaPredicted RBP16.67■□□□□ 0.26
SF3A3-203ENST00000461869 EEF2KMTQ96G04 330 aa16.67■□□□□ 0.26
SF3A3-203ENST00000461869 NAP1L5Q96NT1 182 aaPredicted RBP16.67■□□□□ 0.26
SF3A3-203ENST00000461869 TCHPQ9BT92 498 aa16.67■□□□□ 0.26
SF3A3-203ENST00000461869 TARS2Q9BW92 718 aaKnown RBP16.67■□□□□ 0.26
SF3A3-203ENST00000461869 VPS16Q9H269 839 aa16.67■□□□□ 0.26
SF3A3-203ENST00000461869 DMAC2Q9NW81 257 aa16.67■□□□□ 0.26
SF3A3-203ENST00000461869 PIAS3Q9Y6X2 628 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms