RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 PCDHB5Q9Y5E4 795 aa9.85□□□□□ -0.83
BRCA1-207ENST00000461798 SCN1AP35498 2009 aa9.84□□□□□ -0.83
BRCA1-207ENST00000461798 FAM186AA6NE01 2351 aa9.84□□□□□ -0.83
BRCA1-207ENST00000461798 F11P03951 625 aa9.84□□□□□ -0.83
BRCA1-207ENST00000461798 TMEM191BP0C7N4 346 aa9.84□□□□□ -0.83
BRCA1-207ENST00000461798 HMGA1P17096 107 aaKnown RBP9.84□□□□□ -0.83
BRCA1-207ENST00000461798 GABRR2P28476 465 aa9.84□□□□□ -0.83
BRCA1-207ENST00000461798 CDC25CP30307 473 aa9.84□□□□□ -0.83
BRCA1-207ENST00000461798 ME1P48163 572 aa9.84□□□□□ -0.83
BRCA1-207ENST00000461798 LHX1P48742 406 aa9.84□□□□□ -0.83
BRCA1-207ENST00000461798 MYL7Q01449 175 aa9.84□□□□□ -0.83
BRCA1-207ENST00000461798 TSPY1Q01534 308 aa9.84□□□□□ -0.83
BRCA1-207ENST00000461798 PKP1Q13835 747 aa9.84□□□□□ -0.83
BRCA1-207ENST00000461798 SOWAHAQ2M3V2 549 aa9.84□□□□□ -0.83
BRCA1-207ENST00000461798 MGAT5BQ3V5L5 792 aa9.84□□□□□ -0.83
BRCA1-207ENST00000461798 ARHGAP15Q53QZ3 475 aa9.84□□□□□ -0.83
BRCA1-207ENST00000461798 INTS6LQ5JSJ4 861 aaKnown RBP9.84□□□□□ -0.83
BRCA1-207ENST00000461798 FOXD4L5Q5VV16 416 aaPredicted RBP9.84□□□□□ -0.83
BRCA1-207ENST00000461798 FAM171BQ6P995 826 aa9.84□□□□□ -0.83
BRCA1-207ENST00000461798 C1orf228Q6PIY5 440 aa9.84□□□□□ -0.83
BRCA1-207ENST00000461798 WDR49Q8IV35 697 aa9.84□□□□□ -0.83
BRCA1-207ENST00000461798 C12orf56Q8IXR9 622 aa9.84□□□□□ -0.83
BRCA1-207ENST00000461798 OR5B17Q8NGF7 314 aa9.84□□□□□ -0.83
BRCA1-207ENST00000461798 FAM200AQ8TCP9 573 aa9.84□□□□□ -0.83
BRCA1-207ENST00000461798 TMEM174Q8WUU8 243 aa9.84□□□□□ -0.83
BRCA1-207ENST00000461798 FOXD4L4Q8WXT5 416 aaPredicted RBP9.84□□□□□ -0.83
BRCA1-207ENST00000461798 NELL1Q92832 810 aa9.84□□□□□ -0.83
BRCA1-207ENST00000461798 MSANTD3Q96H12 275 aa9.84□□□□□ -0.83
BRCA1-207ENST00000461798 ANKRD36BP1Q96IX9 119 aa9.84□□□□□ -0.83
BRCA1-207ENST00000461798 LRRC3BQ96PB8 259 aa9.84□□□□□ -0.83
BRCA1-207ENST00000461798 SEPT5Q99719 369 aaPredicted RBP9.84□□□□□ -0.83
BRCA1-207ENST00000461798 LPIN3Q9BQK8 851 aa9.84□□□□□ -0.83
BRCA1-207ENST00000461798 IER2Q9BTL4 223 aa9.84□□□□□ -0.83
BRCA1-207ENST00000461798 MTMR12Q9C0I1 747 aa9.84□□□□□ -0.83
BRCA1-207ENST00000461798 AGPAT3Q9NRZ7 376 aa9.84□□□□□ -0.83
BRCA1-207ENST00000461798 DDX43Q9NXZ2 648 aaKnown RBP9.84□□□□□ -0.83
BRCA1-207ENST00000461798 SNX9Q9Y5X1 595 aa9.84□□□□□ -0.83
BRCA1-207ENST00000461798 MYH15Q9Y2K3 1946 aa9.84□□□□□ -0.83
BRCA1-207ENST00000461798 NCANO14594 1321 aa9.83□□□□□ -0.84
BRCA1-207ENST00000461798 PTPRJQ12913 1337 aa9.83□□□□□ -0.84
BRCA1-207ENST00000461798 ANK1P16157 1881 aa9.83□□□□□ -0.84
BRCA1-207ENST00000461798 LAMTOR5O43504 91 aa9.83□□□□□ -0.84
BRCA1-207ENST00000461798 PRPF40AO75400 957 aaKnown RBP9.83□□□□□ -0.84
BRCA1-207ENST00000461798 LMNAP02545 664 aaKnown RBP9.83□□□□□ -0.84
BRCA1-207ENST00000461798 TNNC2P02585 160 aa9.83□□□□□ -0.84
BRCA1-207ENST00000461798 NUDT7P0C024 238 aa9.83□□□□□ -0.84
BRCA1-207ENST00000461798 SLFN14P0C7P3 912 aa9.83□□□□□ -0.84
BRCA1-207ENST00000461798 CSH1P0DML2 217 aa9.83□□□□□ -0.84
BRCA1-207ENST00000461798 CSH2P0DML3 217 aa9.83□□□□□ -0.84
BRCA1-207ENST00000461798 PCSK1P29120 753 aa9.83□□□□□ -0.84
BRCA1-207ENST00000461798 RPL10AP62906 217 aaKnown RBP9.83□□□□□ -0.84
BRCA1-207ENST00000461798 DNM1Q05193 864 aaKnown RBP9.83□□□□□ -0.84
BRCA1-207ENST00000461798 BFSP1Q12934 665 aa9.83□□□□□ -0.84
BRCA1-207ENST00000461798 MYO1EQ12965 1108 aa9.83□□□□□ -0.84
BRCA1-207ENST00000461798 PSMD6Q15008 389 aa9.83□□□□□ -0.84
BRCA1-207ENST00000461798 SNRNP35Q16560 246 aaKnown RBP9.83□□□□□ -0.84
BRCA1-207ENST00000461798 CFAP221Q4G0U5 840 aa9.83□□□□□ -0.84
BRCA1-207ENST00000461798 ARHGAP29Q52LW3 1261 aa9.83□□□□□ -0.84
BRCA1-207ENST00000461798 STXBP5Q5T5C0 1151 aa9.83□□□□□ -0.84
BRCA1-207ENST00000461798 GPR158Q5T848 1215 aa9.83□□□□□ -0.84
BRCA1-207ENST00000461798 HS2ST1Q7LGA3 356 aa9.83□□□□□ -0.84
BRCA1-207ENST00000461798 TRAPPC11Q7Z392 1133 aa9.83□□□□□ -0.84
BRCA1-207ENST00000461798 TMEM150AQ86TG1 271 aa9.83□□□□□ -0.84
BRCA1-207ENST00000461798 OSTM1Q86WC4 334 aa9.83□□□□□ -0.84
BRCA1-207ENST00000461798 XXYLT1Q8NBI6 393 aa9.83□□□□□ -0.84
BRCA1-207ENST00000461798 GIPC2Q8TF65 315 aa9.83□□□□□ -0.84
BRCA1-207ENST00000461798 FUBP3Q96I24 572 aaKnown RBP eCLIP9.83□□□□□ -0.84
BRCA1-207ENST00000461798 HPDLQ96IR7 371 aa9.83□□□□□ -0.84
BRCA1-207ENST00000461798 FAM84AQ96KN4 292 aa9.83□□□□□ -0.84
BRCA1-207ENST00000461798 MYRFLQ96LU7 910 aa9.83□□□□□ -0.84
BRCA1-207ENST00000461798 CEP295NLQ96MC4 621 aa9.83□□□□□ -0.84
BRCA1-207ENST00000461798 SLC46A2Q9BY10 475 aa9.83□□□□□ -0.84
BRCA1-207ENST00000461798 BLZF1Q9H2G9 400 aa9.83□□□□□ -0.84
BRCA1-207ENST00000461798 CHRDQ9H2X0 955 aa9.83□□□□□ -0.84
BRCA1-207ENST00000461798 SLITRK6Q9H5Y7 841 aa9.83□□□□□ -0.84
BRCA1-207ENST00000461798 C8orf33Q9H7E9 229 aaPredicted RBP9.83□□□□□ -0.84
BRCA1-207ENST00000461798 SPATA6Q9NWH7 488 aaPredicted RBP9.83□□□□□ -0.84
BRCA1-207ENST00000461798 ABI2Q9NYB9 513 aaPredicted RBP9.83□□□□□ -0.84
BRCA1-207ENST00000461798 PIAS3Q9Y6X2 628 aa9.83□□□□□ -0.84
BRCA1-207ENST00000461798 CACNA1IQ9P0X4 2223 aa9.83□□□□□ -0.84
BRCA1-207ENST00000461798 GVINP1Q7Z2Y8 2422 aa9.82□□□□□ -0.84
BRCA1-207ENST00000461798 FAM237AA0A1B0GTK4 181 aa9.82□□□□□ -0.84
BRCA1-207ENST00000461798 MYBPHLA2RUH7 354 aa9.82□□□□□ -0.84
BRCA1-207ENST00000461798 ACTN4O43707 911 aaKnown RBP9.82□□□□□ -0.84
BRCA1-207ENST00000461798 KLRC4O43908 158 aa9.82□□□□□ -0.84
BRCA1-207ENST00000461798 NOL4O94818 638 aa9.82□□□□□ -0.84
BRCA1-207ENST00000461798 STAU1O95793 577 aaKnown RBP9.82□□□□□ -0.84
BRCA1-207ENST00000461798 CST3P01034 146 aaPredicted RBP9.82□□□□□ -0.84
BRCA1-207ENST00000461798 MYL1P05976 194 aa9.82□□□□□ -0.84
BRCA1-207ENST00000461798 KRT19P08727 400 aa9.82□□□□□ -0.84
BRCA1-207ENST00000461798 WARSP23381 471 aaKnown RBP9.82□□□□□ -0.84
BRCA1-207ENST00000461798 CMA1P23946 247 aa9.82□□□□□ -0.84
BRCA1-207ENST00000461798 DDX6P26196 483 aaKnown RBP eCLIP9.82□□□□□ -0.84
BRCA1-207ENST00000461798 CASP1P29466 404 aa9.82□□□□□ -0.84
BRCA1-207ENST00000461798 MAGEA11P43364 429 aa9.82□□□□□ -0.84
BRCA1-207ENST00000461798 NLRP12P59046 1061 aa9.82□□□□□ -0.84
BRCA1-207ENST00000461798 PLCB2Q00722 1185 aa9.82□□□□□ -0.84
BRCA1-207ENST00000461798 CYP24A1Q07973 514 aa9.82□□□□□ -0.84
BRCA1-207ENST00000461798 PSMD2Q13200 908 aa9.82□□□□□ -0.84
BRCA1-207ENST00000461798 CUL4BQ13620 913 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms