RNA–Protein interactions for RNA: ENST00000461743.1

VPS52-213, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 3

Gene VPS52, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-213ENST00000461743 WEE2P0C1S8 567 aa12.67□□□□□ -0.38
VPS52-213ENST00000461743 FSHRP23945 695 aa12.67□□□□□ -0.38
VPS52-213ENST00000461743 MAGEA11P43364 429 aa12.67□□□□□ -0.38
VPS52-213ENST00000461743 ASPAP45381 313 aa12.67□□□□□ -0.38
VPS52-213ENST00000461743 INCA1Q0VD86 236 aa12.67□□□□□ -0.38
VPS52-213ENST00000461743 CETN1Q12798 172 aa12.67□□□□□ -0.38
VPS52-213ENST00000461743 DUSP4Q13115 394 aa12.67□□□□□ -0.38
VPS52-213ENST00000461743 VEPH1Q14D04 833 aa12.67□□□□□ -0.38
VPS52-213ENST00000461743 VSTM1Q6UX27 236 aa12.67□□□□□ -0.38
VPS52-213ENST00000461743 GRASPQ7Z6J2 395 aaPredicted RBP12.67□□□□□ -0.38
VPS52-213ENST00000461743 UNC93AQ86WB7 457 aa12.67□□□□□ -0.38
VPS52-213ENST00000461743 FAM114A1Q8IWE2 563 aa12.67□□□□□ -0.38
VPS52-213ENST00000461743 TRIM59Q8IWR1 403 aa12.67□□□□□ -0.38
VPS52-213ENST00000461743 PSMG2Q969U7 264 aa12.67□□□□□ -0.38
VPS52-213ENST00000461743 NXPE3Q969Y0 559 aa12.67□□□□□ -0.38
VPS52-213ENST00000461743 EEF2KMTQ96G04 330 aa12.67□□□□□ -0.38
VPS52-213ENST00000461743 RPGRIP1Q96KN7 1286 aa12.67□□□□□ -0.38
VPS52-213ENST00000461743 TNIP3Q96KP6 325 aa12.67□□□□□ -0.38
VPS52-213ENST00000461743 ZNF512Q96ME7 567 aaPredicted RBP12.67□□□□□ -0.38
VPS52-213ENST00000461743 PGLYRP2Q96PD5 576 aa12.67□□□□□ -0.38
VPS52-213ENST00000461743 SMYD3Q9H7B4 428 aa12.67□□□□□ -0.38
VPS52-213ENST00000461743 ASAH2Q9NR71 780 aa12.67□□□□□ -0.38
VPS52-213ENST00000461743 ABI2Q9NYB9 513 aaPredicted RBP12.67□□□□□ -0.38
VPS52-213ENST00000461743 NXF1Q9UBU9 619 aaKnown RBP12.67□□□□□ -0.38
VPS52-213ENST00000461743 ATP8B3O60423 1300 aa12.66□□□□□ -0.38
VPS52-213ENST00000461743 A8MXQ7 604 aa12.66□□□□□ -0.38
VPS52-213ENST00000461743 RHOP08100 348 aa12.66□□□□□ -0.38
VPS52-213ENST00000461743 HAPLN1P10915 354 aaPredicted RBP12.66□□□□□ -0.38
VPS52-213ENST00000461743 ALADP13716 330 aa12.66□□□□□ -0.38
VPS52-213ENST00000461743 ACAT1P24752 427 aaKnown RBP12.66□□□□□ -0.38
VPS52-213ENST00000461743 GNL1P36915 607 aaPredicted RBP12.66□□□□□ -0.38
VPS52-213ENST00000461743 FMO5P49326 533 aa12.66□□□□□ -0.38
VPS52-213ENST00000461743 STX17P56962 302 aa12.66□□□□□ -0.38
VPS52-213ENST00000461743 RPL10AP62906 217 aaKnown RBP12.66□□□□□ -0.38
VPS52-213ENST00000461743 GSE1Q14687 1217 aa12.66□□□□□ -0.38
VPS52-213ENST00000461743 DPCR1Q3MIW9 517 aa12.66□□□□□ -0.38
VPS52-213ENST00000461743 MGAT5BQ3V5L5 792 aa12.66□□□□□ -0.38
VPS52-213ENST00000461743 WDR44Q5JSH3 913 aa12.66□□□□□ -0.38
VPS52-213ENST00000461743 SCARA5Q6ZMJ2 495 aa12.66□□□□□ -0.38
VPS52-213ENST00000461743 PDZD4Q76G19 769 aaPredicted RBP12.66□□□□□ -0.38
VPS52-213ENST00000461743 GET4Q7L5D6 327 aaPredicted RBP12.66□□□□□ -0.38
VPS52-213ENST00000461743 LRRTM3Q86VH5 581 aa12.66□□□□□ -0.38
VPS52-213ENST00000461743 SPATA2LQ8IUW3 424 aaPredicted RBP12.66□□□□□ -0.38
VPS52-213ENST00000461743 ATAD1Q8NBU5 361 aa12.66□□□□□ -0.38
VPS52-213ENST00000461743 OR6B3Q8NGW1 331 aa12.66□□□□□ -0.38
VPS52-213ENST00000461743 MYCBPAPQ8TBZ2 947 aa12.66□□□□□ -0.38
VPS52-213ENST00000461743 SEPT5Q99719 369 aaPredicted RBP12.66□□□□□ -0.38
VPS52-213ENST00000461743 MRPL45Q9BRJ2 306 aaKnown RBP12.66□□□□□ -0.38
VPS52-213ENST00000461743 SRRTQ9BXP5 876 aaKnown RBP12.66□□□□□ -0.38
VPS52-213ENST00000461743 CRISPLD1Q9H336 500 aa12.66□□□□□ -0.38
VPS52-213ENST00000461743 MMRN2Q9H8L6 949 aa12.66□□□□□ -0.38
VPS52-213ENST00000461743 RAB20Q9NX57 234 aa12.66□□□□□ -0.38
VPS52-213ENST00000461743 GDE1Q9NZC3 331 aa12.66□□□□□ -0.38
VPS52-213ENST00000461743 ZMYM5Q9UJ78 669 aa12.66□□□□□ -0.38
VPS52-213ENST00000461743 POLIQ9UNA4 740 aa12.66□□□□□ -0.38
VPS52-213ENST00000461743 TECTAO75443 2155 aa12.65□□□□□ -0.38
VPS52-213ENST00000461743 DCXO43602 365 aa12.65□□□□□ -0.38
VPS52-213ENST00000461743 GBP2P32456 591 aaPredicted RBP12.65□□□□□ -0.38
VPS52-213ENST00000461743 YWHAEP62258 255 aaKnown RBP12.65□□□□□ -0.38
VPS52-213ENST00000461743 STX1AQ16623 288 aa12.65□□□□□ -0.38
VPS52-213ENST00000461743 CBWD6Q4V339 395 aa12.65□□□□□ -0.38
VPS52-213ENST00000461743 CBWD3Q5JTY5 395 aa12.65□□□□□ -0.38
VPS52-213ENST00000461743 PRSS36Q5K4E3 855 aa12.65□□□□□ -0.38
VPS52-213ENST00000461743 CBWD5Q5RIA9 395 aa12.65□□□□□ -0.38
VPS52-213ENST00000461743 CYP4A22Q5TCH4 519 aa12.65□□□□□ -0.38
VPS52-213ENST00000461743 SMYD5Q6GMV2 418 aa12.65□□□□□ -0.38
VPS52-213ENST00000461743 MTSS1LQ765P7 747 aa12.65□□□□□ -0.38
VPS52-213ENST00000461743 RNF135Q8IUD6 432 aa12.65□□□□□ -0.38
VPS52-213ENST00000461743 B3GALNT2Q8NCR0 500 aa12.65□□□□□ -0.38
VPS52-213ENST00000461743 FEZF2Q8TBJ5 459 aa12.65□□□□□ -0.38
VPS52-213ENST00000461743 MYLPFQ96A32 169 aa12.65□□□□□ -0.38
VPS52-213ENST00000461743 CNOT6LQ96LI5 555 aaKnown RBP12.65□□□□□ -0.38
VPS52-213ENST00000461743 ELOVL4Q9GZR5 314 aa12.65□□□□□ -0.38
VPS52-213ENST00000461743 DNAJC25Q9H1X3 360 aa12.65□□□□□ -0.38
VPS52-213ENST00000461743 THAP9Q9H5L6 903 aa12.65□□□□□ -0.38
VPS52-213ENST00000461743 CD320Q9NPF0 282 aa12.65□□□□□ -0.38
VPS52-213ENST00000461743 CRTAC1Q9NQ79 661 aa12.65□□□□□ -0.38
VPS52-213ENST00000461743 TMLHEQ9NVH6 421 aa12.65□□□□□ -0.38
VPS52-213ENST00000461743 CEP72Q9P209 647 aa12.65□□□□□ -0.38
VPS52-213ENST00000461743 IGSF9Q9P2J2 1179 aa12.65□□□□□ -0.38
VPS52-213ENST00000461743 DNMT3BQ9UBC3 853 aaKnown RBP12.65□□□□□ -0.38
VPS52-213ENST00000461743 MAGEC2Q9UBF1 373 aaPredicted RBP12.65□□□□□ -0.38
VPS52-213ENST00000461743 CDH7Q9ULB5 785 aa12.65□□□□□ -0.38
VPS52-213ENST00000461743 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.65□□□□□ -0.38
VPS52-213ENST00000461743 COL4A2P08572 1712 aa12.65□□□□□ -0.38
VPS52-213ENST00000461743 MIA3Q5JRA6 1907 aa12.64□□□□□ -0.39
VPS52-213ENST00000461743 MYBPHLA2RUH7 354 aa12.64□□□□□ -0.39
VPS52-213ENST00000461743 TRIM66O15016 1216 aa12.64□□□□□ -0.39
VPS52-213ENST00000461743 AFPP02771 609 aaKnown RBP12.64□□□□□ -0.39
VPS52-213ENST00000461743 CSH1P0DML2 217 aa12.64□□□□□ -0.39
VPS52-213ENST00000461743 CSH2P0DML3 217 aa12.64□□□□□ -0.39
VPS52-213ENST00000461743 ATF6P18850 670 aa12.64□□□□□ -0.39
VPS52-213ENST00000461743 TBXAS1P24557 533 aaPredicted RBP12.64□□□□□ -0.39
VPS52-213ENST00000461743 LMO2P25791 158 aa12.64□□□□□ -0.39
VPS52-213ENST00000461743 CDC25CP30307 473 aa12.64□□□□□ -0.39
VPS52-213ENST00000461743 PSMC1P62191 440 aaKnown RBP12.64□□□□□ -0.39
VPS52-213ENST00000461743 PTPN21Q16825 1174 aa12.64□□□□□ -0.39
VPS52-213ENST00000461743 TPD52L1Q16890 204 aaPredicted RBP12.64□□□□□ -0.39
VPS52-213ENST00000461743 SPOPLQ6IQ16 392 aa12.64□□□□□ -0.39
VPS52-213ENST00000461743 TMC8Q8IU68 726 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms