RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 PNPLA7Q6ZV29 1317 aa3.64□□□□□ -1.83
HDAC6-212ENST00000461608 CCDC195A0A1B0GUA6 201 aa3.63□□□□□ -1.83
HDAC6-212ENST00000461608 PRSS29PA6NIE9 313 aa3.63□□□□□ -1.83
HDAC6-212ENST00000461608 F8W8V4 182 aa3.63□□□□□ -1.83
HDAC6-212ENST00000461608 NPHP1O15259 732 aa3.63□□□□□ -1.83
HDAC6-212ENST00000461608 GPR42O15529 346 aa3.63□□□□□ -1.83
HDAC6-212ENST00000461608 PLA2G6O60733 806 aa3.63□□□□□ -1.83
HDAC6-212ENST00000461608 RASSF9O75901 435 aa3.63□□□□□ -1.83
HDAC6-212ENST00000461608 RECQL4O94761 1208 aa3.63□□□□□ -1.83
HDAC6-212ENST00000461608 TGM1P22735 817 aa3.63□□□□□ -1.83
HDAC6-212ENST00000461608 ACVR2AP27037 513 aa3.63□□□□□ -1.83
HDAC6-212ENST00000461608 LRPAP1P30533 357 aa3.63□□□□□ -1.83
HDAC6-212ENST00000461608 IL6STP40189 918 aaPredicted RBP3.63□□□□□ -1.83
HDAC6-212ENST00000461608 HSPA7P48741 367 aa3.63□□□□□ -1.83
HDAC6-212ENST00000461608 MAN2A2P49641 1150 aa3.63□□□□□ -1.83
HDAC6-212ENST00000461608 UCP3P55916 312 aa3.63□□□□□ -1.83
HDAC6-212ENST00000461608 FOXL1Q12952 345 aa3.63□□□□□ -1.83
HDAC6-212ENST00000461608 IQCB1Q15051 598 aa3.63□□□□□ -1.83
HDAC6-212ENST00000461608 AGAP9Q5VTM2 703 aa3.63□□□□□ -1.83
HDAC6-212ENST00000461608 DCAF12L1Q5VU92 463 aa3.63□□□□□ -1.83
HDAC6-212ENST00000461608 SFRP4Q6FHJ7 346 aaPredicted RBP3.63□□□□□ -1.83
HDAC6-212ENST00000461608 TCTN3Q6NUS6 607 aa3.63□□□□□ -1.83
HDAC6-212ENST00000461608 ZNF585AQ6P3V2 769 aa3.63□□□□□ -1.83
HDAC6-212ENST00000461608 FOXR2Q6PJQ5 311 aa3.63□□□□□ -1.83
HDAC6-212ENST00000461608 MED25Q71SY5 747 aa3.63□□□□□ -1.83
HDAC6-212ENST00000461608 KRT28Q7Z3Y7 464 aa3.63□□□□□ -1.83
HDAC6-212ENST00000461608 DNAJC10Q8IXB1 793 aa3.63□□□□□ -1.83
HDAC6-212ENST00000461608 SMAP1Q8IYB5 467 aaPredicted RBP3.63□□□□□ -1.83
HDAC6-212ENST00000461608 ELOA2Q8IYF1 753 aaPredicted RBP3.63□□□□□ -1.83
HDAC6-212ENST00000461608 CPXCR1Q8N123 301 aa3.63□□□□□ -1.83
HDAC6-212ENST00000461608 SLC15A4Q8N697 577 aa3.63□□□□□ -1.83
HDAC6-212ENST00000461608 MB21D1Q8N884 522 aa3.63□□□□□ -1.83
HDAC6-212ENST00000461608 PCSK9Q8NBP7 692 aaKnown RBP3.63□□□□□ -1.83
HDAC6-212ENST00000461608 RNF169Q8NCN4 708 aa3.63□□□□□ -1.83
HDAC6-212ENST00000461608 PDPRQ8NCN5 879 aa3.63□□□□□ -1.83
HDAC6-212ENST00000461608 SLC17A8Q8NDX2 589 aa3.63□□□□□ -1.83
HDAC6-212ENST00000461608 CCT6BQ92526 530 aa3.63□□□□□ -1.83
HDAC6-212ENST00000461608 EDAQ92838 391 aa3.63□□□□□ -1.83
HDAC6-212ENST00000461608 WWC2-AS2Q96NR7 200 aa3.63□□□□□ -1.83
HDAC6-212ENST00000461608 HEPHQ9BQS7 1158 aa3.63□□□□□ -1.83
HDAC6-212ENST00000461608 IMPG2Q9BZV3 1241 aa3.63□□□□□ -1.83
HDAC6-212ENST00000461608 PPCSQ9HAB8 311 aa3.63□□□□□ -1.83
HDAC6-212ENST00000461608 CD248Q9HCU0 757 aa3.63□□□□□ -1.83
HDAC6-212ENST00000461608 XPNPEP3Q9NQH7 507 aa3.63□□□□□ -1.83
HDAC6-212ENST00000461608 RNF181Q9P0P0 153 aa3.63□□□□□ -1.83
HDAC6-212ENST00000461608 HESX1Q9UBX0 185 aa3.63□□□□□ -1.83
HDAC6-212ENST00000461608 PCDHGB2Q9Y5G2 931 aa3.63□□□□□ -1.83
HDAC6-212ENST00000461608 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.62□□□□□ -1.83
HDAC6-212ENST00000461608 PATE3B3GLJ2 98 aa3.62□□□□□ -1.83
HDAC6-212ENST00000461608 E9PLN8 166 aa3.62□□□□□ -1.83
HDAC6-212ENST00000461608 POLRMTO00411 1230 aaKnown RBP3.62□□□□□ -1.83
HDAC6-212ENST00000461608 SYT5O00445 386 aa3.62□□□□□ -1.83
HDAC6-212ENST00000461608 GLP2RO95838 553 aa3.62□□□□□ -1.83
HDAC6-212ENST00000461608 HLA-DOAP06340 250 aa3.62□□□□□ -1.83
HDAC6-212ENST00000461608 HARSP12081 509 aaKnown RBP3.62□□□□□ -1.83
HDAC6-212ENST00000461608 FCER1AP12319 257 aa3.62□□□□□ -1.83
HDAC6-212ENST00000461608 IL1R1P14778 569 aa3.62□□□□□ -1.83
HDAC6-212ENST00000461608 ITGALP20701 1170 aa3.62□□□□□ -1.83
HDAC6-212ENST00000461608 HALP42357 657 aa3.62□□□□□ -1.83
HDAC6-212ENST00000461608 PHKA1P46020 1223 aa3.62□□□□□ -1.83
HDAC6-212ENST00000461608 ALDH9A1P49189 494 aa3.62□□□□□ -1.83
HDAC6-212ENST00000461608 SELENOPP49908 381 aa3.62□□□□□ -1.83
HDAC6-212ENST00000461608 CHN2P52757 468 aa3.62□□□□□ -1.83
HDAC6-212ENST00000461608 RABGGTBP53611 331 aa3.62□□□□□ -1.83
HDAC6-212ENST00000461608 COPAP53621 1224 aa3.62□□□□□ -1.83
HDAC6-212ENST00000461608 SLFN5Q08AF3 891 aa3.62□□□□□ -1.83
HDAC6-212ENST00000461608 FOXO1Q12778 655 aa3.62□□□□□ -1.83
HDAC6-212ENST00000461608 ARHGEF7Q14155 803 aa3.62□□□□□ -1.83
HDAC6-212ENST00000461608 SLC29A2Q14542 456 aa3.62□□□□□ -1.83
HDAC6-212ENST00000461608 PUM3Q15397 648 aaKnown RBP3.62□□□□□ -1.83
HDAC6-212ENST00000461608 CCDC38Q502W7 563 aa3.62□□□□□ -1.83
HDAC6-212ENST00000461608 TAPT1Q6NXT6 567 aa3.62□□□□□ -1.83
HDAC6-212ENST00000461608 LAYNQ6UX15 382 aa3.62□□□□□ -1.83
HDAC6-212ENST00000461608 SGMS1Q86VZ5 419 aa3.62□□□□□ -1.83
HDAC6-212ENST00000461608 CFAP52Q8N1V2 620 aa3.62□□□□□ -1.83
HDAC6-212ENST00000461608 VGLL2Q8N8G2 317 aa3.62□□□□□ -1.83
HDAC6-212ENST00000461608 FAM46DQ8NEK8 389 aa3.62□□□□□ -1.83
HDAC6-212ENST00000461608 MYRIPQ8NFW9 859 aa3.62□□□□□ -1.83
HDAC6-212ENST00000461608 SNX27Q96L92 541 aa3.62□□□□□ -1.83
HDAC6-212ENST00000461608 GNRHR2Q96P88 292 aa3.62□□□□□ -1.83
HDAC6-212ENST00000461608 TRIB1Q96RU8 372 aa3.62□□□□□ -1.83
HDAC6-212ENST00000461608 CRAMP1Q96RY5 1269 aa3.62□□□□□ -1.83
HDAC6-212ENST00000461608 VKORC1Q9BQB6 163 aa3.62□□□□□ -1.83
HDAC6-212ENST00000461608 STK31Q9BXU1 1019 aa3.62□□□□□ -1.83
HDAC6-212ENST00000461608 GPR87Q9BY21 358 aa3.62□□□□□ -1.83
HDAC6-212ENST00000461608 MS4A7Q9GZW8 240 aaPredicted RBP3.62□□□□□ -1.83
HDAC6-212ENST00000461608 MYLK2Q9H1R3 596 aa3.62□□□□□ -1.83
HDAC6-212ENST00000461608 CHST8Q9H2A9 424 aa3.62□□□□□ -1.83
HDAC6-212ENST00000461608 TMEM8AQ9HCN3 771 aa3.62□□□□□ -1.83
HDAC6-212ENST00000461608 KCNE5Q9UJ90 142 aa3.62□□□□□ -1.83
HDAC6-212ENST00000461608 CDC23Q9UJX2 597 aa3.62□□□□□ -1.83
HDAC6-212ENST00000461608 ITGB1BP2Q9UKP3 347 aa3.62□□□□□ -1.83
HDAC6-212ENST00000461608 HDAC9Q9UKV0 1011 aa3.62□□□□□ -1.83
HDAC6-212ENST00000461608 CA14Q9ULX7 337 aa3.62□□□□□ -1.83
HDAC6-212ENST00000461608 CAPN11Q9UMQ6 739 aa3.62□□□□□ -1.83
HDAC6-212ENST00000461608 CDYLQ9Y232 598 aa3.62□□□□□ -1.83
HDAC6-212ENST00000461608 MORC2Q9Y6X9 1032 aaPredicted RBP3.62□□□□□ -1.83
HDAC6-212ENST00000461608 GAGE12BA1L429 117 aa3.61□□□□□ -1.83
HDAC6-212ENST00000461608 GAGE12HA6NDE8 117 aa3.61□□□□□ -1.83
HDAC6-212ENST00000461608 PODXLO00592 558 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms