RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 WDR49Q8IV35 697 aa15.42■□□□□ 0.06
PTPRU-205ENST00000460170 DPP3Q9NY33 737 aa15.42■□□□□ 0.06
PTPRU-205ENST00000460170 MYL6P60660 151 aa15.42■□□□□ 0.06
PTPRU-205ENST00000460170 GCNT1Q02742 428 aa15.42■□□□□ 0.06
PTPRU-205ENST00000460170 MFSD14CQ5VZR4 134 aa15.42■□□□□ 0.06
PTPRU-205ENST00000460170 NOTUMQ6P988 496 aa15.42■□□□□ 0.06
PTPRU-205ENST00000460170 E2F7Q96AV8 911 aa15.42■□□□□ 0.06
PTPRU-205ENST00000460170 NPTXRO95502 500 aa15.42■□□□□ 0.06
PTPRU-205ENST00000460170 PYGBP11216 843 aa15.42■□□□□ 0.06
PTPRU-205ENST00000460170 C1QBPQ07021 282 aaKnown RBP15.42■□□□□ 0.06
PTPRU-205ENST00000460170 SPOCD1Q6ZMY3 1216 aa15.42■□□□□ 0.06
PTPRU-205ENST00000460170 DTX3LQ8TDB6 740 aa15.42■□□□□ 0.06
PTPRU-205ENST00000460170 PARD3BQ8TEW8 1205 aa15.42■□□□□ 0.06
PTPRU-205ENST00000460170 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.42■□□□□ 0.065e-7■■■□□ 17.9
PTPRU-205ENST00000460170 CYP3A7-CYP3A51PA0A087WV96 503 aa15.41■□□□□ 0.06
PTPRU-205ENST00000460170 RRN3P2A6NIE6 340 aa15.41■□□□□ 0.06
PTPRU-205ENST00000460170 CYP3A7P24462 503 aa15.41■□□□□ 0.06
PTPRU-205ENST00000460170 MMP14P50281 582 aa15.41■□□□□ 0.06
PTPRU-205ENST00000460170 FKBP1AP62942 108 aaKnown RBP15.41■□□□□ 0.06
PTPRU-205ENST00000460170 ORC1Q13415 861 aa15.41■□□□□ 0.06
PTPRU-205ENST00000460170 ZNF235Q14590 738 aa15.41■□□□□ 0.06
PTPRU-205ENST00000460170 KATNAL1Q9BW62 490 aa15.41■□□□□ 0.06
PTPRU-205ENST00000460170 YIPF3Q9GZM5 350 aa15.41■□□□□ 0.06
PTPRU-205ENST00000460170 SYNPO2Q9UMS6 1093 aa15.41■□□□□ 0.06
PTPRU-205ENST00000460170 UBR1Q8IWV7 1749 aa15.41■□□□□ 0.06
PTPRU-205ENST00000460170 TTC36A6NLP5 189 aa15.41■□□□□ 0.06
PTPRU-205ENST00000460170 MEIS2O14770 477 aa15.41■□□□□ 0.06
PTPRU-205ENST00000460170 TNPO2O14787 897 aaKnown RBP15.41■□□□□ 0.06
PTPRU-205ENST00000460170 KCNMA1Q12791 1236 aa15.41■□□□□ 0.06
PTPRU-205ENST00000460170 MAPRE2Q15555 327 aa15.41■□□□□ 0.06
PTPRU-205ENST00000460170 NBPF12Q5TAG4 269 aaPredicted RBP15.41■□□□□ 0.06
PTPRU-205ENST00000460170 KDELC2Q7Z4H8 507 aa15.41■□□□□ 0.06
PTPRU-205ENST00000460170 SPATA2LQ8IUW3 424 aaPredicted RBP15.41■□□□□ 0.06
PTPRU-205ENST00000460170 ASAP3Q8TDY4 903 aa15.41■□□□□ 0.06
PTPRU-205ENST00000460170 ANLNQ9NQW6 1124 aa15.41■□□□□ 0.06
PTPRU-205ENST00000460170 CAMTA1Q9Y6Y1 1673 aa15.41■□□□□ 0.06
PTPRU-205ENST00000460170 EIF4E1BA6NMX2 242 aaKnown RBP15.41■□□□□ 0.06
PTPRU-205ENST00000460170 PYGMP11217 842 aa15.41■□□□□ 0.06
PTPRU-205ENST00000460170 PBX1P40424 430 aa15.41■□□□□ 0.06
PTPRU-205ENST00000460170 USP10Q14694 798 aaKnown RBP15.41■□□□□ 0.06
PTPRU-205ENST00000460170 MROH9Q5TGP6 573 aa15.41■□□□□ 0.06
PTPRU-205ENST00000460170 PHTF1Q9UMS5 762 aa15.41■□□□□ 0.06
PTPRU-205ENST00000460170 RCCD1A6NED2 376 aa15.41■□□□□ 0.06
PTPRU-205ENST00000460170 F8W8V4 182 aa15.41■□□□□ 0.06
PTPRU-205ENST00000460170 DGKDQ16760 1214 aa15.41■□□□□ 0.06
PTPRU-205ENST00000460170 LRRC43Q8N309 656 aa15.41■□□□□ 0.06
PTPRU-205ENST00000460170 ICA1LQ8NDH6 482 aa15.41■□□□□ 0.06
PTPRU-205ENST00000460170 FBXO36Q8NEA4 188 aa15.41■□□□□ 0.06
PTPRU-205ENST00000460170 SLC7A14Q8TBB6 771 aa15.41■□□□□ 0.06
PTPRU-205ENST00000460170 STAMBPL1Q96FJ0 436 aa15.41■□□□□ 0.06
PTPRU-205ENST00000460170 MAGEB18Q96M61 343 aa15.41■□□□□ 0.06
PTPRU-205ENST00000460170 MMTAG2Q9BU76 263 aaKnown RBP15.41■□□□□ 0.06
PTPRU-205ENST00000460170 SLC38A7Q9NVC3 462 aa15.41■□□□□ 0.06
PTPRU-205ENST00000460170 UBA6A0AVT1 1052 aaPredicted RBP15.41■□□□□ 0.06
PTPRU-205ENST00000460170 B2RBV5 119 aa15.41■□□□□ 0.06
PTPRU-205ENST00000460170 GRIK1P39086 918 aa15.41■□□□□ 0.06
PTPRU-205ENST00000460170 ERFP50548 548 aa15.41■□□□□ 0.06
PTPRU-205ENST00000460170 FAXCQ5TGI0 409 aa15.41■□□□□ 0.06
PTPRU-205ENST00000460170 CYB5D1Q6P9G0 228 aa15.41■□□□□ 0.06
PTPRU-205ENST00000460170 ATPAF2Q8N5M1 289 aa15.41■□□□□ 0.06
PTPRU-205ENST00000460170 C4orf32Q8N8J7 132 aa15.41■□□□□ 0.06
PTPRU-205ENST00000460170 USP33Q8TEY7 942 aa15.41■□□□□ 0.06
PTPRU-205ENST00000460170 BAP1Q92560 729 aa15.41■□□□□ 0.06
PTPRU-205ENST00000460170 DNAJC5Q9H3Z4 198 aa15.41■□□□□ 0.06
PTPRU-205ENST00000460170 PCDHA3Q9Y5H8 950 aa15.41■□□□□ 0.06
PTPRU-205ENST00000460170 CCDC78A2IDD5 438 aa15.4■□□□□ 0.06
PTPRU-205ENST00000460170 CPB1P15086 417 aa15.4■□□□□ 0.06
PTPRU-205ENST00000460170 HNRNPH3P31942 346 aaKnown RBP15.4■□□□□ 0.06
PTPRU-205ENST00000460170 PNPLA4P41247 253 aa15.4■□□□□ 0.06
PTPRU-205ENST00000460170 ZNF484Q5JVG2 852 aa15.4■□□□□ 0.06
PTPRU-205ENST00000460170 ZC3H15Q8WU90 426 aaKnown RBP15.4■□□□□ 0.06
PTPRU-205ENST00000460170 SARS2Q9NP81 518 aaKnown RBP15.4■□□□□ 0.06
PTPRU-205ENST00000460170 FAM198AQ9UFP1 575 aa15.4■□□□□ 0.06
PTPRU-205ENST00000460170 UBQLN1Q9UMX0 589 aaKnown RBP15.4■□□□□ 0.06
PTPRU-205ENST00000460170 PCSK1P29120 753 aa15.4■□□□□ 0.06
PTPRU-205ENST00000460170 CACNB2Q08289 660 aaPredicted RBP15.4■□□□□ 0.06
PTPRU-205ENST00000460170 ZNF844Q08AG5 666 aa15.4■□□□□ 0.06
PTPRU-205ENST00000460170 CAPRIN2Q6IMN6 1127 aaKnown RBP15.4■□□□□ 0.06
PTPRU-205ENST00000460170 CDC26Q8NHZ8 85 aa15.4■□□□□ 0.06
PTPRU-205ENST00000460170 TMEM121Q9BTD3 319 aa15.4■□□□□ 0.06
PTPRU-205ENST00000460170 TMEM150BA6NC51 233 aa15.4■□□□□ 0.06
PTPRU-205ENST00000460170 E5RI56 91 aa15.4■□□□□ 0.06
PTPRU-205ENST00000460170 KLHL2O95198 593 aa15.4■□□□□ 0.06
PTPRU-205ENST00000460170 CTSHP09668 335 aa15.4■□□□□ 0.06
PTPRU-205ENST00000460170 TAF6P49848 677 aa15.4■□□□□ 0.06
PTPRU-205ENST00000460170 DCAF4L1Q3SXM0 396 aa15.4■□□□□ 0.06
PTPRU-205ENST00000460170 COBLL1Q53SF7 1204 aa15.4■□□□□ 0.06
PTPRU-205ENST00000460170 ARMC2Q8NEN0 867 aa15.4■□□□□ 0.06
PTPRU-205ENST00000460170 FAM111AQ96PZ2 611 aa15.4■□□□□ 0.06
PTPRU-205ENST00000460170 MRIQ9BWK5 157 aa15.4■□□□□ 0.06
PTPRU-205ENST00000460170 MTSS1O43312 755 aa15.4■□□□□ 0.06
PTPRU-205ENST00000460170 C6orf222P0C671 652 aaPredicted RBP15.4■□□□□ 0.06
PTPRU-205ENST00000460170 BIRC2Q13490 618 aa15.4■□□□□ 0.06
PTPRU-205ENST00000460170 LCA5Q86VQ0 697 aa15.4■□□□□ 0.06
PTPRU-205ENST00000460170 TSEN2Q8NCE0 465 aaKnown RBP15.4■□□□□ 0.06
PTPRU-205ENST00000460170 PTPRN2Q92932 1015 aa15.4■□□□□ 0.06
PTPRU-205ENST00000460170 GCNAQ96QF7 691 aa15.4■□□□□ 0.06
PTPRU-205ENST00000460170 EML4Q9HC35 981 aaKnown RBP15.4■□□□□ 0.06
PTPRU-205ENST00000460170 MRC1P22897 1456 aa15.39■□□□□ 0.05
PTPRU-205ENST00000460170 RIPK2O43353 540 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms