RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 CLEC4FQ8N1N0 589 aa10.19□□□□□ -0.78
UFD1-205ENST00000459854 DCLK2Q8N568 766 aa10.19□□□□□ -0.78
UFD1-205ENST00000459854 QKIQ96PU8 341 aaKnown RBP eCLIP10.19□□□□□ -0.78
UFD1-205ENST00000459854 RAVER2Q9HCJ3 691 aaKnown RBP10.19□□□□□ -0.78
UFD1-205ENST00000459854 AURKCQ9UQB9 309 aa10.19□□□□□ -0.78
UFD1-205ENST00000459854 PDHXO00330 501 aa10.19□□□□□ -0.78
UFD1-205ENST00000459854 TEX33O43247 280 aa10.19□□□□□ -0.78
UFD1-205ENST00000459854 USP1O94782 785 aa10.19□□□□□ -0.78
UFD1-205ENST00000459854 THRAP10827 490 aa10.19□□□□□ -0.78
UFD1-205ENST00000459854 FCER1AP12319 257 aa10.19□□□□□ -0.78
UFD1-205ENST00000459854 PMLP29590 882 aa10.19□□□□□ -0.78
UFD1-205ENST00000459854 RAB15P59190 212 aa10.19□□□□□ -0.78
UFD1-205ENST00000459854 BNC1Q01954 994 aa10.19□□□□□ -0.78
UFD1-205ENST00000459854 NAB2Q15742 525 aa10.19□□□□□ -0.78
UFD1-205ENST00000459854 PAPD7Q5XG87 772 aaKnown RBP10.19□□□□□ -0.78
UFD1-205ENST00000459854 LRRC34Q8IZ02 419 aa10.19□□□□□ -0.78
UFD1-205ENST00000459854 CYGBQ8WWM9 190 aa10.19□□□□□ -0.78
UFD1-205ENST00000459854 INPP5DQ92835 1189 aa10.19□□□□□ -0.78
UFD1-205ENST00000459854 NR1H4Q96RI1 486 aaPredicted RBP10.19□□□□□ -0.78
UFD1-205ENST00000459854 RNF146Q9NTX7 359 aa10.19□□□□□ -0.78
UFD1-205ENST00000459854 RSL24D1Q9UHA3 163 aaKnown RBP10.19□□□□□ -0.78
UFD1-205ENST00000459854 ADAM30Q9UKF2 790 aa10.19□□□□□ -0.78
UFD1-205ENST00000459854 GRID1Q9ULK0 1009 aa10.19□□□□□ -0.78
UFD1-205ENST00000459854 GDAQ9Y2T3 454 aa10.19□□□□□ -0.78
UFD1-205ENST00000459854 TRPC5OSA6NMA1 111 aa10.19□□□□□ -0.78
UFD1-205ENST00000459854 NFIBO00712 420 aa10.19□□□□□ -0.78
UFD1-205ENST00000459854 TNPO2O14787 897 aaKnown RBP10.19□□□□□ -0.78
UFD1-205ENST00000459854 OCM2P0CE71 109 aa10.19□□□□□ -0.78
UFD1-205ENST00000459854 OCMP0CE72 109 aaPredicted RBP10.19□□□□□ -0.78
UFD1-205ENST00000459854 HSD17B3P37058 310 aa10.19□□□□□ -0.78
UFD1-205ENST00000459854 CSTF3Q12996 717 aaKnown RBP10.19□□□□□ -0.78
UFD1-205ENST00000459854 ZFP1Q6P2D0 407 aa10.19□□□□□ -0.78
UFD1-205ENST00000459854 SFR1Q86XK3 245 aa10.19□□□□□ -0.78
UFD1-205ENST00000459854 ADGRF4Q8IZF3 695 aa10.19□□□□□ -0.78
UFD1-205ENST00000459854 ACAP3Q96P50 834 aa10.19□□□□□ -0.78
UFD1-205ENST00000459854 APOL4Q9BPW4 351 aa10.19□□□□□ -0.78
UFD1-205ENST00000459854 MLXIPLQ9NP71 852 aa10.19□□□□□ -0.78
UFD1-205ENST00000459854 A1CFQ9NQ94 594 aaKnown RBP10.19□□□□□ -0.78
UFD1-205ENST00000459854 SAR1AQ9NR31 198 aa10.19□□□□□ -0.78
UFD1-205ENST00000459854 CDYLQ9Y232 598 aa10.19□□□□□ -0.78
UFD1-205ENST00000459854 NR3C1P04150 777 aa10.18□□□□□ -0.78
UFD1-205ENST00000459854 AP3M2P53677 418 aa10.18□□□□□ -0.78
UFD1-205ENST00000459854 POLGP54098 1239 aaPredicted RBP10.18□□□□□ -0.78
UFD1-205ENST00000459854 PRAMEP78395 509 aa10.18□□□□□ -0.78
UFD1-205ENST00000459854 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.18□□□□□ -0.78
UFD1-205ENST00000459854 REXO1L1PQ8IX06 675 aa10.18□□□□□ -0.78
UFD1-205ENST00000459854 KIF2BQ8N4N8 673 aa10.18□□□□□ -0.78
UFD1-205ENST00000459854 RAD54LQ92698 747 aa10.18□□□□□ -0.78
UFD1-205ENST00000459854 KRT35Q92764 455 aa10.18□□□□□ -0.78
UFD1-205ENST00000459854 CAAP1Q9H8G2 361 aa10.18□□□□□ -0.78
UFD1-205ENST00000459854 CREBZFQ9NS37 354 aa10.18□□□□□ -0.78
UFD1-205ENST00000459854 PRR12Q9ULL5 1215 aa10.18□□□□□ -0.78
UFD1-205ENST00000459854 SNRPAP09012 282 aaKnown RBP10.18□□□□□ -0.78
UFD1-205ENST00000459854 FGFR4P22455 802 aa10.18□□□□□ -0.78
UFD1-205ENST00000459854 PDAP1Q13442 181 aaKnown RBP10.18□□□□□ -0.78
UFD1-205ENST00000459854 OLFML1Q6UWY5 402 aa10.18□□□□□ -0.78
UFD1-205ENST00000459854 TEPSINQ96N21 525 aa10.18□□□□□ -0.78
UFD1-205ENST00000459854 LRRC37AA6NMS7 1700 aa10.18□□□□□ -0.78
UFD1-205ENST00000459854 GOLGA8SH3BPF8 625 aa10.18□□□□□ -0.78
UFD1-205ENST00000459854 PDE9AO76083 593 aa10.18□□□□□ -0.78
UFD1-205ENST00000459854 NR5A1Q13285 461 aa10.18□□□□□ -0.78
UFD1-205ENST00000459854 SLC12A1Q13621 1099 aa10.18□□□□□ -0.78
UFD1-205ENST00000459854 TTC39BQ5VTQ0 682 aaPredicted RBP10.18□□□□□ -0.78
UFD1-205ENST00000459854 ARMCX2Q7L311 632 aa10.18□□□□□ -0.78
UFD1-205ENST00000459854 ARMCX6Q7L4S7 300 aa10.18□□□□□ -0.78
UFD1-205ENST00000459854 JAMLQ86YT9 394 aa10.18□□□□□ -0.78
UFD1-205ENST00000459854 KCTD17Q8N5Z5 321 aa10.18□□□□□ -0.78
UFD1-205ENST00000459854 TSPAN17Q96FV3 270 aa10.18□□□□□ -0.78
UFD1-205ENST00000459854 RBM15Q96T37 977 aaKnown RBP eCLIP10.18□□□□□ -0.782e-6■□□□□ 8.9
UFD1-205ENST00000459854 C1orf50Q9BV19 199 aa10.18□□□□□ -0.78
UFD1-205ENST00000459854 RBM12Q9NTZ6 932 aaKnown RBP10.18□□□□□ -0.78
UFD1-205ENST00000459854 ZNF112Q9UJU3 913 aa10.18□□□□□ -0.78
UFD1-205ENST00000459854 MKL2Q9ULH7 1088 aa10.18□□□□□ -0.78
UFD1-205ENST00000459854 TMCO1Q9UM00 188 aa10.18□□□□□ -0.78
UFD1-205ENST00000459854 A0A087WWV3 80 aa10.18□□□□□ -0.78
UFD1-205ENST00000459854 POTEFA5A3E0 1075 aa10.18□□□□□ -0.78
UFD1-205ENST00000459854 SPDYE16A6NNV3 312 aaPredicted RBP10.18□□□□□ -0.78
UFD1-205ENST00000459854 F8VZ95 297 aa10.18□□□□□ -0.78
UFD1-205ENST00000459854 MYO1DO94832 1006 aa10.18□□□□□ -0.78
UFD1-205ENST00000459854 PLEKHA8P1O95397 391 aa10.18□□□□□ -0.78
UFD1-205ENST00000459854 C21orf59P57076 290 aa10.18□□□□□ -0.78
UFD1-205ENST00000459854 ZNF200P98182 395 aaPredicted RBP10.18□□□□□ -0.78
UFD1-205ENST00000459854 FAM47CQ5HY64 1035 aa10.18□□□□□ -0.78
UFD1-205ENST00000459854 POTEEQ6S8J3 1075 aa10.18□□□□□ -0.78
UFD1-205ENST00000459854 PLEKHM3Q6ZWE6 761 aa10.18□□□□□ -0.78
UFD1-205ENST00000459854 PRPF39Q86UA1 669 aaKnown RBP10.18□□□□□ -0.78
UFD1-205ENST00000459854 BBS7Q8IWZ6 715 aa10.18□□□□□ -0.78
UFD1-205ENST00000459854 CHST13Q8NET6 341 aa10.18□□□□□ -0.78
UFD1-205ENST00000459854 CENPTQ96BT3 561 aa10.18□□□□□ -0.78
UFD1-205ENST00000459854 MPP4Q96JB8 637 aa10.18□□□□□ -0.78
UFD1-205ENST00000459854 MMP19Q99542 508 aa10.18□□□□□ -0.78
UFD1-205ENST00000459854 ZNF556Q9HAH1 456 aa10.18□□□□□ -0.78
UFD1-205ENST00000459854 ATXN10Q9UBB4 475 aa10.18□□□□□ -0.78
UFD1-205ENST00000459854 TAGLN3Q9UI15 199 aa10.18□□□□□ -0.78
UFD1-205ENST00000459854 SEC24DO94855 1032 aaPredicted RBP10.17□□□□□ -0.78
UFD1-205ENST00000459854 PSMA4P25789 261 aaKnown RBP10.17□□□□□ -0.78
UFD1-205ENST00000459854 CA8P35219 290 aa10.17□□□□□ -0.78
UFD1-205ENST00000459854 IL12RB1P42701 662 aa10.17□□□□□ -0.78
UFD1-205ENST00000459854 USP11P51784 963 aa10.17□□□□□ -0.78
UFD1-205ENST00000459854 FCGRTP55899 365 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms