RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 UBR7Q8N806 425 aa14.89□□□□□ -0.03
SCFD1-203ENST00000458591 AGBL3Q8NEM8 1001 aa14.89□□□□□ -0.03
SCFD1-203ENST00000458591 ACTL9Q8TC94 416 aa14.89□□□□□ -0.03
SCFD1-203ENST00000458591 SLC7A6OSQ96CW6 309 aaPredicted RBP14.89□□□□□ -0.03
SCFD1-203ENST00000458591 RBM41Q96IZ5 413 aaKnown RBP14.89□□□□□ -0.03
SCFD1-203ENST00000458591 BATF3Q9NR55 127 aa14.89□□□□□ -0.03
SCFD1-203ENST00000458591 RABGEF1Q9UJ41 708 aa14.89□□□□□ -0.03
SCFD1-203ENST00000458591 CNTN6Q9UQ52 1028 aa14.89□□□□□ -0.03
SCFD1-203ENST00000458591 C3orf70A6NLC5 250 aaPredicted RBP14.88□□□□□ -0.03
SCFD1-203ENST00000458591 SPATA31C2B4DYI2 1134 aa14.88□□□□□ -0.03
SCFD1-203ENST00000458591 PIK3R2O00459 728 aa14.88□□□□□ -0.03
SCFD1-203ENST00000458591 OATP04181 439 aa14.88□□□□□ -0.03
SCFD1-203ENST00000458591 CCND1P24385 295 aa14.88□□□□□ -0.03
SCFD1-203ENST00000458591 EPHB2P29323 1055 aa14.88□□□□□ -0.03
SCFD1-203ENST00000458591 BACE1P56817 501 aa14.88□□□□□ -0.03
SCFD1-203ENST00000458591 ACVR2BQ13705 512 aa14.88□□□□□ -0.03
SCFD1-203ENST00000458591 TFDP3Q5H9I0 405 aa14.88□□□□□ -0.03
SCFD1-203ENST00000458591 EEPD1Q7L9B9 569 aa14.88□□□□□ -0.03
SCFD1-203ENST00000458591 RHPN2Q8IUC4 686 aa14.88□□□□□ -0.03
SCFD1-203ENST00000458591 IGDCC3Q8IVU1 814 aa14.88□□□□□ -0.03
SCFD1-203ENST00000458591 UNC45BQ8IWX7 931 aa14.88□□□□□ -0.03
SCFD1-203ENST00000458591 RFWD2Q8NHY2 731 aa14.88□□□□□ -0.03
SCFD1-203ENST00000458591 LRRC8CQ8TDW0 803 aa14.88□□□□□ -0.03
SCFD1-203ENST00000458591 FBF1Q8TES7 1133 aa14.88□□□□□ -0.03
SCFD1-203ENST00000458591 C10orf82Q8WW14 230 aa14.88□□□□□ -0.03
SCFD1-203ENST00000458591 CPT1BQ92523 772 aa14.88□□□□□ -0.03
SCFD1-203ENST00000458591 ZNF75CPQ92670 426 aaPredicted RBP14.88□□□□□ -0.03
SCFD1-203ENST00000458591 PRR11Q96HE9 360 aaPredicted RBP14.88□□□□□ -0.03
SCFD1-203ENST00000458591 PCYT2Q99447 389 aa14.88□□□□□ -0.03
SCFD1-203ENST00000458591 STARD13Q9Y3M8 1113 aa14.88□□□□□ -0.03
SCFD1-203ENST00000458591 C2orf71A6NGG8 1288 aa14.88□□□□□ -0.03
SCFD1-203ENST00000458591 MAGEB2O15479 319 aa14.88□□□□□ -0.03
SCFD1-203ENST00000458591 PRPF4O43172 522 aaKnown RBP eCLIP14.88□□□□□ -0.03
SCFD1-203ENST00000458591 CST8O60676 142 aa14.88□□□□□ -0.03
SCFD1-203ENST00000458591 TMEM63AO94886 807 aa14.88□□□□□ -0.03
SCFD1-203ENST00000458591 GJB1P08034 283 aa14.88□□□□□ -0.03
SCFD1-203ENST00000458591 SRGAP2CP0DJJ0 459 aa14.88□□□□□ -0.03
SCFD1-203ENST00000458591 CDH8P55286 799 aa14.88□□□□□ -0.03
SCFD1-203ENST00000458591 LACTBP83111 547 aaPredicted RBP14.88□□□□□ -0.03
SCFD1-203ENST00000458591 PDK4Q16654 411 aa14.88□□□□□ -0.03
SCFD1-203ENST00000458591 FER1L6Q2WGJ9 1857 aa14.88□□□□□ -0.03
SCFD1-203ENST00000458591 TAF1BQ53T94 588 aaPredicted RBP14.88□□□□□ -0.03
SCFD1-203ENST00000458591 PPP1R15BQ5SWA1 713 aa14.88□□□□□ -0.03
SCFD1-203ENST00000458591 HHATQ5VTY9 493 aa14.88□□□□□ -0.03
SCFD1-203ENST00000458591 MAB21L3Q8N8X9 362 aa14.88□□□□□ -0.03
SCFD1-203ENST00000458591 CEP120Q8N960 986 aa14.88□□□□□ -0.03
SCFD1-203ENST00000458591 TTC8Q8TAM2 541 aa14.88□□□□□ -0.03
SCFD1-203ENST00000458591 PTPRN2Q92932 1015 aa14.88□□□□□ -0.03
SCFD1-203ENST00000458591 LRRC37BQ96QE4 947 aa14.88□□□□□ -0.03
SCFD1-203ENST00000458591 DHX33Q9H6R0 707 aaKnown RBP14.88□□□□□ -0.03
SCFD1-203ENST00000458591 UBN1Q9NPG3 1134 aa14.88□□□□□ -0.03
SCFD1-203ENST00000458591 KANSL3Q9P2N6 904 aa14.88□□□□□ -0.03
SCFD1-203ENST00000458591 NFASCO94856 1347 aa14.87□□□□□ -0.03
SCFD1-203ENST00000458591 H0Y3Z8 333 aa14.87□□□□□ -0.03
SCFD1-203ENST00000458591 ASS1P00966 412 aaKnown RBP14.87□□□□□ -0.03
SCFD1-203ENST00000458591 MARK3P27448 753 aa14.87□□□□□ -0.03
SCFD1-203ENST00000458591 RPL22P35268 128 aaKnown RBP14.87□□□□□ -0.03
SCFD1-203ENST00000458591 PSEN1P49768 467 aa14.87□□□□□ -0.03
SCFD1-203ENST00000458591 TFAMQ00059 246 aaKnown RBP14.87□□□□□ -0.03
SCFD1-203ENST00000458591 PRKG1Q13976 671 aa14.87□□□□□ -0.03
SCFD1-203ENST00000458591 MORF4L2Q15014 288 aa14.87□□□□□ -0.03
SCFD1-203ENST00000458591 BBS9Q3SYG4 887 aa14.87□□□□□ -0.03
SCFD1-203ENST00000458591 PTPN20Q4JDL3 420 aa14.87□□□□□ -0.03
SCFD1-203ENST00000458591 NPNTQ6UXI9 565 aa14.87□□□□□ -0.03
SCFD1-203ENST00000458591 C3orf62Q6ZUJ4 267 aa14.87□□□□□ -0.03
SCFD1-203ENST00000458591 CENPUQ71F23 418 aa14.87□□□□□ -0.03
SCFD1-203ENST00000458591 LONP2Q86WA8 852 aa14.87□□□□□ -0.03
SCFD1-203ENST00000458591 FBXO36Q8NEA4 188 aa14.87□□□□□ -0.03
SCFD1-203ENST00000458591 FAM167BQ9BTA0 163 aa14.87□□□□□ -0.03
SCFD1-203ENST00000458591 NXF1Q9UBU9 619 aaKnown RBP14.87□□□□□ -0.03
SCFD1-203ENST00000458591 AGTPBP1Q9UPW5 1226 aa14.87□□□□□ -0.03
SCFD1-203ENST00000458591 MAFBQ9Y5Q3 323 aaPredicted RBP14.87□□□□□ -0.03
SCFD1-203ENST00000458591 USH1CQ9Y6N9 552 aa14.87□□□□□ -0.03
SCFD1-203ENST00000458591 KIAA1217Q5T5P2 1943 aa14.87□□□□□ -0.03
SCFD1-203ENST00000458591 TBXAS1P24557 533 aaPredicted RBP14.87□□□□□ -0.03
SCFD1-203ENST00000458591 PSMA2P25787 234 aa14.87□□□□□ -0.03
SCFD1-203ENST00000458591 CETN2P41208 172 aa14.87□□□□□ -0.03
SCFD1-203ENST00000458591 NAMPTP43490 491 aa14.87□□□□□ -0.03
SCFD1-203ENST00000458591 ATP11AP98196 1134 aa14.87□□□□□ -0.03
SCFD1-203ENST00000458591 EN1Q05925 392 aaPredicted RBP14.87□□□□□ -0.03
SCFD1-203ENST00000458591 HIF1AQ16665 826 aa14.87□□□□□ -0.03
SCFD1-203ENST00000458591 MTDHQ86UE4 582 aaKnown RBP14.87□□□□□ -0.03
SCFD1-203ENST00000458591 LRRC71Q8N4P6 559 aa14.87□□□□□ -0.03
SCFD1-203ENST00000458591 SLC35B2Q8TB61 432 aa14.87□□□□□ -0.03
SCFD1-203ENST00000458591 TCP10LQ8TDR4 215 aa14.87□□□□□ -0.03
SCFD1-203ENST00000458591 R3HDMLQ9H3Y0 253 aa14.87□□□□□ -0.03
SCFD1-203ENST00000458591 HACL1Q9UJ83 578 aa14.87□□□□□ -0.03
SCFD1-203ENST00000458591 FARP1Q9Y4F1 1045 aaPredicted RBP14.87□□□□□ -0.03
SCFD1-203ENST00000458591 CD19P15391 556 aa14.86□□□□□ -0.03
SCFD1-203ENST00000458591 YARSP54577 528 aaKnown RBP14.86□□□□□ -0.03
SCFD1-203ENST00000458591 LMNB2Q03252 620 aa14.86□□□□□ -0.03
SCFD1-203ENST00000458591 SETDB1Q15047 1291 aa14.86□□□□□ -0.03
SCFD1-203ENST00000458591 SH3PXD2AQ5TCZ1 1133 aa14.86□□□□□ -0.03
SCFD1-203ENST00000458591 LRRC6Q86X45 466 aa14.86□□□□□ -0.03
SCFD1-203ENST00000458591 TDRPQ86YL5 185 aa14.86□□□□□ -0.03
SCFD1-203ENST00000458591 TMEM192Q8IY95 271 aa14.86□□□□□ -0.03
SCFD1-203ENST00000458591 THNSL1Q8IYQ7 743 aa14.86□□□□□ -0.03
SCFD1-203ENST00000458591 RIBC1Q8N443 379 aaPredicted RBP14.86□□□□□ -0.03
SCFD1-203ENST00000458591 FAM71DQ8N9W8 422 aa14.86□□□□□ -0.03
SCFD1-203ENST00000458591 FAM13CQ8NE31 585 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms