RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 EFCAB13Q8IY85 973 aa11.25□□□□□ -0.61
HDLBP-227ENST00000458564 DCP1BQ8IZD4 617 aaKnown RBP11.25□□□□□ -0.61
HDLBP-227ENST00000458564 C12orf50Q8NA57 414 aaPredicted RBP11.25□□□□□ -0.61
HDLBP-227ENST00000458564 RIN3Q8TB24 985 aa11.25□□□□□ -0.61
HDLBP-227ENST00000458564 GIPC2Q8TF65 315 aa11.25□□□□□ -0.61
HDLBP-227ENST00000458564 HVCN1Q96D96 273 aa11.25□□□□□ -0.61
HDLBP-227ENST00000458564 ZNF560Q96MR9 790 aa11.25□□□□□ -0.61
HDLBP-227ENST00000458564 ARRDC1-AS1Q9H2J1 176 aa11.25□□□□□ -0.61
HDLBP-227ENST00000458564 EBF3Q9H4W6 596 aa11.25□□□□□ -0.61
HDLBP-227ENST00000458564 ABCB6Q9NP58 842 aa11.25□□□□□ -0.61
HDLBP-227ENST00000458564 TDP1Q9NUW8 608 aa11.25□□□□□ -0.61
HDLBP-227ENST00000458564 DPP3Q9NY33 737 aa11.25□□□□□ -0.61
HDLBP-227ENST00000458564 ABI2Q9NYB9 513 aaPredicted RBP11.25□□□□□ -0.61
HDLBP-227ENST00000458564 AGO2Q9UKV8 859 aaKnown RBP11.25□□□□□ -0.61
HDLBP-227ENST00000458564 PCDHB5Q9Y5E4 795 aa11.25□□□□□ -0.61
HDLBP-227ENST00000458564 ASPMQ8IZT6 3477 aa11.25□□□□□ -0.61
HDLBP-227ENST00000458564 FRYQ5TBA9 3013 aa11.25□□□□□ -0.61
HDLBP-227ENST00000458564 TISP43B9A030 160 aa11.24□□□□□ -0.61
HDLBP-227ENST00000458564 H3BQV1 296 aa11.24□□□□□ -0.61
HDLBP-227ENST00000458564 RNF40O75150 1001 aa11.24□□□□□ -0.61
HDLBP-227ENST00000458564 TADA3O75528 432 aa11.24□□□□□ -0.61
HDLBP-227ENST00000458564 PPP1R37O75864 691 aa11.24□□□□□ -0.61
HDLBP-227ENST00000458564 IL18RAPO95256 599 aa11.24□□□□□ -0.61
HDLBP-227ENST00000458564 KRT18P05783 430 aaKnown RBP11.24□□□□□ -0.61
HDLBP-227ENST00000458564 CSH1P0DML2 217 aa11.24□□□□□ -0.61
HDLBP-227ENST00000458564 CSH2P0DML3 217 aa11.24□□□□□ -0.61
HDLBP-227ENST00000458564 DRD1P21728 446 aa11.24□□□□□ -0.61
HDLBP-227ENST00000458564 NMT1P30419 496 aaKnown RBP11.24□□□□□ -0.61
HDLBP-227ENST00000458564 MCM6Q14566 821 aa11.24□□□□□ -0.61
HDLBP-227ENST00000458564 KARSQ15046 597 aaKnown RBP11.24□□□□□ -0.61
HDLBP-227ENST00000458564 PDGFRLQ15198 375 aa11.24□□□□□ -0.61
HDLBP-227ENST00000458564 RABEP1Q15276 862 aa11.24□□□□□ -0.61
HDLBP-227ENST00000458564 ZC2HC1CQ53FD0 456 aaPredicted RBP11.24□□□□□ -0.61
HDLBP-227ENST00000458564 TRIM68Q6AZZ1 485 aa11.24□□□□□ -0.61
HDLBP-227ENST00000458564 CRELD2Q6UXH1 353 aaPredicted RBP11.24□□□□□ -0.61
HDLBP-227ENST00000458564 MAB21L3Q8N8X9 362 aa11.24□□□□□ -0.61
HDLBP-227ENST00000458564 SPATA18Q8TC71 538 aa11.24□□□□□ -0.61
HDLBP-227ENST00000458564 LARP4BQ92615 738 aaKnown RBP11.24□□□□□ -0.61
HDLBP-227ENST00000458564 MRPS31Q92665 395 aaKnown RBP11.24□□□□□ -0.61
HDLBP-227ENST00000458564 EXOC4Q96A65 974 aa11.24□□□□□ -0.61
HDLBP-227ENST00000458564 TRMT2BQ96GJ1 504 aaKnown RBP11.24□□□□□ -0.61
HDLBP-227ENST00000458564 MYRFLQ96LU7 910 aa11.24□□□□□ -0.61
HDLBP-227ENST00000458564 STRA6Q9BX79 667 aa11.24□□□□□ -0.61
HDLBP-227ENST00000458564 TMLHEQ9NVH6 421 aa11.24□□□□□ -0.61
HDLBP-227ENST00000458564 UXTQ9UBK9 157 aaPredicted RBP11.24□□□□□ -0.61
HDLBP-227ENST00000458564 ANGPTL2Q9UKU9 493 aa11.24□□□□□ -0.61
HDLBP-227ENST00000458564 SLC8A2Q9UPR5 921 aa11.24□□□□□ -0.61
HDLBP-227ENST00000458564 DENND4CQ5VZ89 1909 aa11.24□□□□□ -0.61
HDLBP-227ENST00000458564 AXIN1O15169 862 aa11.23□□□□□ -0.61
HDLBP-227ENST00000458564 NOL4O94818 638 aa11.23□□□□□ -0.61
HDLBP-227ENST00000458564 EGFP01133 1207 aa11.23□□□□□ -0.61
HDLBP-227ENST00000458564 CCDC192P0DO97 292 aa11.23□□□□□ -0.61
HDLBP-227ENST00000458564 ARSAP15289 507 aa11.23□□□□□ -0.61
HDLBP-227ENST00000458564 GJB2P29033 226 aa11.23□□□□□ -0.61
HDLBP-227ENST00000458564 ADSSP30520 456 aa11.23□□□□□ -0.61
HDLBP-227ENST00000458564 MPLP40238 635 aa11.23□□□□□ -0.61
HDLBP-227ENST00000458564 PXNP49023 591 aaPredicted RBP11.23□□□□□ -0.61
HDLBP-227ENST00000458564 TSPY1Q01534 308 aa11.23□□□□□ -0.61
HDLBP-227ENST00000458564 FAM160A1Q05DH4 1040 aa11.23□□□□□ -0.61
HDLBP-227ENST00000458564 USP4Q13107 963 aa11.23□□□□□ -0.61
HDLBP-227ENST00000458564 DHX8Q14562 1220 aaKnown RBP11.23□□□□□ -0.61
HDLBP-227ENST00000458564 POSTNQ15063 836 aa11.23□□□□□ -0.61
HDLBP-227ENST00000458564 ZNF77Q15935 545 aa11.23□□□□□ -0.61
HDLBP-227ENST00000458564 PLK5Q496M5 336 aa11.23□□□□□ -0.61
HDLBP-227ENST00000458564 STPG1Q5TH74 334 aa11.23□□□□□ -0.61
HDLBP-227ENST00000458564 TXNDC8Q6A555 127 aa11.23□□□□□ -0.61
HDLBP-227ENST00000458564 CC2D1AQ6P1N0 951 aaPredicted RBP11.23□□□□□ -0.61
HDLBP-227ENST00000458564 SYT13Q7L8C5 426 aa11.23□□□□□ -0.61
HDLBP-227ENST00000458564 ZNF720Q7Z2F6 126 aa11.23□□□□□ -0.61
HDLBP-227ENST00000458564 TMEM86AQ8N2M4 240 aa11.23□□□□□ -0.61
HDLBP-227ENST00000458564 PDCL2Q8N4E4 241 aa11.23□□□□□ -0.61
HDLBP-227ENST00000458564 LRRC52Q8N7C0 313 aa11.23□□□□□ -0.61
HDLBP-227ENST00000458564 TMX3Q96JJ7 454 aa11.23□□□□□ -0.61
HDLBP-227ENST00000458564 PKMYT1Q99640 499 aa11.23□□□□□ -0.61
HDLBP-227ENST00000458564 ACBD6Q9BR61 282 aa11.23□□□□□ -0.61
HDLBP-227ENST00000458564 ZHX3Q9H4I2 956 aa11.23□□□□□ -0.61
HDLBP-227ENST00000458564 TMEM206Q9H813 350 aa11.23□□□□□ -0.61
HDLBP-227ENST00000458564 RXFP3Q9NSD7 469 aa11.23□□□□□ -0.61
HDLBP-227ENST00000458564 SEL1LQ9UBV2 794 aa11.23□□□□□ -0.61
HDLBP-227ENST00000458564 EBF1Q9UH73 591 aa11.23□□□□□ -0.61
HDLBP-227ENST00000458564 OBSL1O75147 1896 aa11.23□□□□□ -0.61
HDLBP-227ENST00000458564 PRPF40AO75400 957 aaKnown RBP11.22□□□□□ -0.61
HDLBP-227ENST00000458564 TCF3P15923 654 aa11.22□□□□□ -0.61
HDLBP-227ENST00000458564 GJA4P35212 333 aa11.22□□□□□ -0.61
HDLBP-227ENST00000458564 DDIT3P35638 169 aa11.22□□□□□ -0.61
HDLBP-227ENST00000458564 CDR1P51861 262 aa11.22□□□□□ -0.61
HDLBP-227ENST00000458564 RPL10AP62906 217 aaKnown RBP11.22□□□□□ -0.61
HDLBP-227ENST00000458564 GRIN1Q05586 938 aa11.22□□□□□ -0.61
HDLBP-227ENST00000458564 MTF1Q14872 753 aa11.22□□□□□ -0.61
HDLBP-227ENST00000458564 C8orf34Q49A92 452 aa11.22□□□□□ -0.61
HDLBP-227ENST00000458564 CFAP221Q4G0U5 840 aa11.22□□□□□ -0.61
HDLBP-227ENST00000458564 INTS6LQ5JSJ4 861 aaKnown RBP11.22□□□□□ -0.61
HDLBP-227ENST00000458564 BRAPQ7Z569 592 aa11.22□□□□□ -0.61
HDLBP-227ENST00000458564 SFR1Q86XK3 245 aa11.22□□□□□ -0.61
HDLBP-227ENST00000458564 BRSK2Q8IWQ3 736 aa11.22□□□□□ -0.61
HDLBP-227ENST00000458564 CPA6Q8N4T0 437 aa11.22□□□□□ -0.61
HDLBP-227ENST00000458564 KRI1Q8N9T8 703 aaKnown RBP11.22□□□□□ -0.61
HDLBP-227ENST00000458564 RASSF8Q8NHQ8 419 aa11.22□□□□□ -0.61
HDLBP-227ENST00000458564 CXorf38Q8TB03 319 aa11.22□□□□□ -0.61
HDLBP-227ENST00000458564 OSCP1Q8WVF1 389 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms