RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 ZCWPW2Q504Y3 356 aa19.99■□□□□ 0.79
USP39-209ENST00000458268 DCAF17Q5H9S7 520 aaPredicted RBP19.99■□□□□ 0.79
USP39-209ENST00000458268 MDH1BQ5I0G3 518 aa19.99■□□□□ 0.79
USP39-209ENST00000458268 PRSS36Q5K4E3 855 aa19.99■□□□□ 0.79
USP39-209ENST00000458268 SPOPLQ6IQ16 392 aa19.99■□□□□ 0.79
USP39-209ENST00000458268 MTSS1LQ765P7 747 aa19.99■□□□□ 0.79
USP39-209ENST00000458268 DPH6Q7L8W6 267 aa19.99■□□□□ 0.79
USP39-209ENST00000458268 DNAJB7Q7Z6W7 309 aaPredicted RBP19.99■□□□□ 0.79
USP39-209ENST00000458268 SUGP1Q8IWZ8 645 aaKnown RBP19.99■□□□□ 0.79
USP39-209ENST00000458268 SLC44A3Q8N4M1 653 aa19.99■□□□□ 0.79
USP39-209ENST00000458268 C2orf15Q8WU43 125 aaKnown RBP19.99■□□□□ 0.79
USP39-209ENST00000458268 MYLPFQ96A32 169 aa19.99■□□□□ 0.79
USP39-209ENST00000458268 ZNF334Q9HCZ1 680 aaPredicted RBP19.99■□□□□ 0.79
USP39-209ENST00000458268 CA14Q9ULX7 337 aa19.99■□□□□ 0.79
USP39-209ENST00000458268 CTNND2Q9UQB3 1225 aa19.99■□□□□ 0.79
USP39-209ENST00000458268 ZFP37Q9Y6Q3 630 aaPredicted RBP19.99■□□□□ 0.79
USP39-209ENST00000458268 STK25O00506 426 aa19.98■□□□□ 0.79
USP39-209ENST00000458268 PSMA7O14818 248 aa19.98■□□□□ 0.79
USP39-209ENST00000458268 WARSP23381 471 aaKnown RBP19.98■□□□□ 0.79
USP39-209ENST00000458268 GABRR2P28476 465 aa19.98■□□□□ 0.79
USP39-209ENST00000458268 GNL1P36915 607 aaPredicted RBP19.98■□□□□ 0.79
USP39-209ENST00000458268 SMARCB1Q12824 385 aa19.98■□□□□ 0.79
USP39-209ENST00000458268 DDR2Q16832 855 aa19.98■□□□□ 0.79
USP39-209ENST00000458268 EDRF1Q3B7T1 1238 aa19.98■□□□□ 0.79
USP39-209ENST00000458268 ANKRD40Q6AI12 368 aa19.98■□□□□ 0.79
USP39-209ENST00000458268 SV2AQ7L0J3 742 aa19.98■□□□□ 0.79
USP39-209ENST00000458268 ADSSL1Q8N142 457 aa19.98■□□□□ 0.79
USP39-209ENST00000458268 SHKBP1Q8TBC3 707 aa19.98■□□□□ 0.79
USP39-209ENST00000458268 GCNAQ96QF7 691 aa19.98■□□□□ 0.79
USP39-209ENST00000458268 IMPG2Q9BZV3 1241 aa19.98■□□□□ 0.79
USP39-209ENST00000458268 XYLT2Q9H1B5 865 aa19.98■□□□□ 0.79
USP39-209ENST00000458268 ATXN3LQ9H3M9 355 aa19.98■□□□□ 0.79
USP39-209ENST00000458268 CDH9Q9ULB4 789 aa19.98■□□□□ 0.79
USP39-209ENST00000458268 DUSP12Q9UNI6 340 aa19.98■□□□□ 0.79
USP39-209ENST00000458268 GABRDO14764 452 aa19.97■□□□□ 0.79
USP39-209ENST00000458268 CD44P16070 742 aaKnown RBP19.97■□□□□ 0.79
USP39-209ENST00000458268 STX17P56962 302 aa19.97■□□□□ 0.79
USP39-209ENST00000458268 CYP4F8P98187 520 aa19.97■□□□□ 0.79
USP39-209ENST00000458268 PPP3CAQ08209 521 aa19.97■□□□□ 0.79
USP39-209ENST00000458268 NFIL3Q16649 462 aa19.97■□□□□ 0.79
USP39-209ENST00000458268 ZACNQ401N2 412 aa19.97■□□□□ 0.79
USP39-209ENST00000458268 C1orf220Q5T0J3 134 aa19.97■□□□□ 0.79
USP39-209ENST00000458268 STXBP5Q5T5C0 1151 aa19.97■□□□□ 0.79
USP39-209ENST00000458268 C4orf50Q6ZRC1 276 aa19.97■□□□□ 0.79
USP39-209ENST00000458268 TMC8Q8IU68 726 aa19.97■□□□□ 0.79
USP39-209ENST00000458268 LEMD2Q8NC56 503 aa19.97■□□□□ 0.79
USP39-209ENST00000458268 FLCNQ8NFG4 579 aa19.97■□□□□ 0.79
USP39-209ENST00000458268 SPATA20Q8TB22 786 aa19.97■□□□□ 0.79
USP39-209ENST00000458268 PSMG2Q969U7 264 aa19.97■□□□□ 0.79
USP39-209ENST00000458268 DPEP3Q9H4B8 488 aa19.97■□□□□ 0.79
USP39-209ENST00000458268 CRTAC1Q9NQ79 661 aa19.97■□□□□ 0.79
USP39-209ENST00000458268 MAGEC2Q9UBF1 373 aaPredicted RBP19.97■□□□□ 0.79
USP39-209ENST00000458268 HCN4Q9Y3Q4 1203 aa19.97■□□□□ 0.79
USP39-209ENST00000458268 ASB3Q9Y575 518 aa19.97■□□□□ 0.79
USP39-209ENST00000458268 MAPK13O15264 365 aa19.96■□□□□ 0.79
USP39-209ENST00000458268 P4HA1P13674 534 aa19.96■□□□□ 0.79
USP39-209ENST00000458268 CLDN10P78369 228 aa19.96■□□□□ 0.79
USP39-209ENST00000458268 ORC1Q13415 861 aa19.96■□□□□ 0.79
USP39-209ENST00000458268 SIX5Q8N196 739 aa19.96■□□□□ 0.79
USP39-209ENST00000458268 SPATA18Q8TC71 538 aa19.96■□□□□ 0.79
USP39-209ENST00000458268 TAS1R2Q8TE23 839 aa19.96■□□□□ 0.79
USP39-209ENST00000458268 NELFBQ8WX92 580 aa19.96■□□□□ 0.79
USP39-209ENST00000458268 ASIC4Q96FT7 647 aa19.96■□□□□ 0.79
USP39-209ENST00000458268 ZSWIM3Q96MP5 696 aa19.96■□□□□ 0.79
USP39-209ENST00000458268 GTPBP4Q9BZE4 634 aaKnown RBP19.96■□□□□ 0.79
USP39-209ENST00000458268 AVENQ9NQS1 362 aaPredicted RBP19.96■□□□□ 0.79
USP39-209ENST00000458268 GDE1Q9NZC3 331 aa19.96■□□□□ 0.79
USP39-209ENST00000458268 MYH10P35580 1976 aa19.95■□□□□ 0.78
USP39-209ENST00000458268 ZNF638Q14966 1978 aaKnown RBP19.95■□□□□ 0.78
USP39-209ENST00000458268 ANHXE9PGG2 379 aa19.95■□□□□ 0.78
USP39-209ENST00000458268 IKBKBO14920 756 aa19.95■□□□□ 0.78
USP39-209ENST00000458268 TACC1O75410 805 aa19.95■□□□□ 0.78
USP39-209ENST00000458268 MOSPD3O75425 235 aa19.95■□□□□ 0.78
USP39-209ENST00000458268 BDNFP23560 247 aa19.95■□□□□ 0.78
USP39-209ENST00000458268 CCNE1P24864 410 aa19.95■□□□□ 0.78
USP39-209ENST00000458268 RPL10AP62906 217 aaKnown RBP19.95■□□□□ 0.78
USP39-209ENST00000458268 FKBP3Q00688 224 aaKnown RBP19.95■□□□□ 0.78
USP39-209ENST00000458268 GRM2Q14416 872 aa19.95■□□□□ 0.78
USP39-209ENST00000458268 SGSM1Q2NKQ1 1148 aa19.95■□□□□ 0.78
USP39-209ENST00000458268 CCDC40Q4G0X9 1142 aa19.95■□□□□ 0.78
USP39-209ENST00000458268 ARHGAP15Q53QZ3 475 aa19.95■□□□□ 0.78
USP39-209ENST00000458268 FAM78AQ5JUQ0 283 aa19.95■□□□□ 0.78
USP39-209ENST00000458268 GPR158Q5T848 1215 aa19.95■□□□□ 0.78
USP39-209ENST00000458268 TANGO2Q6ICL3 276 aa19.95■□□□□ 0.78
USP39-209ENST00000458268 POTEHQ6S545 545 aa19.95■□□□□ 0.78
USP39-209ENST00000458268 CCDC150Q8NCX0 1101 aa19.95■□□□□ 0.78
USP39-209ENST00000458268 TTC16Q8NEE8 873 aa19.95■□□□□ 0.78
USP39-209ENST00000458268 ZSCAN18Q8TBC5 510 aaPredicted RBP19.95■□□□□ 0.78
USP39-209ENST00000458268 TMEM174Q8WUU8 243 aa19.95■□□□□ 0.78
USP39-209ENST00000458268 NXPE3Q969Y0 559 aa19.95■□□□□ 0.78
USP39-209ENST00000458268 PKMYT1Q99640 499 aa19.95■□□□□ 0.78
USP39-209ENST00000458268 MED10Q9BTT4 135 aa19.95■□□□□ 0.78
USP39-209ENST00000458268 SDCBP2Q9H190 292 aa19.95■□□□□ 0.78
USP39-209ENST00000458268 HSFX1Q9UBD0 423 aa19.95■□□□□ 0.78
USP39-209ENST00000458268 NME7Q9Y5B8 376 aa19.95■□□□□ 0.78
USP39-209ENST00000458268 STAU1O95793 577 aaKnown RBP19.94■□□□□ 0.78
USP39-209ENST00000458268 SRFP11831 508 aa19.94■□□□□ 0.78
USP39-209ENST00000458268 PTPN1P18031 435 aaKnown RBP19.94■□□□□ 0.78
USP39-209ENST00000458268 GRIK1P39086 918 aa19.94■□□□□ 0.78
USP39-209ENST00000458268 VIPR2P41587 438 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms