RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 RFPL2O75678 378 aa10.75□□□□□ -0.69
ATG4A-206ENST00000457035 ZMYND10O75800 440 aa10.75□□□□□ -0.69
ATG4A-206ENST00000457035 AFPP02771 609 aaKnown RBP10.75□□□□□ -0.69
ATG4A-206ENST00000457035 PDGFRBP09619 1106 aa10.75□□□□□ -0.69
ATG4A-206ENST00000457035 WEE2P0C1S8 567 aa10.75□□□□□ -0.69
ATG4A-206ENST00000457035 SRGAP2BP0DMP2 458 aa10.75□□□□□ -0.69
ATG4A-206ENST00000457035 ACAT1P24752 427 aaKnown RBP10.75□□□□□ -0.69
ATG4A-206ENST00000457035 ASPAP45381 313 aa10.75□□□□□ -0.69
ATG4A-206ENST00000457035 MYL7Q01449 175 aa10.75□□□□□ -0.69
ATG4A-206ENST00000457035 ADCY1Q08828 1119 aa10.75□□□□□ -0.69
ATG4A-206ENST00000457035 CLUL1Q15846 466 aa10.75□□□□□ -0.69
ATG4A-206ENST00000457035 ZSCAN23Q3MJ62 389 aa10.75□□□□□ -0.69
ATG4A-206ENST00000457035 HSP90AA4PQ58FG1 418 aa10.75□□□□□ -0.69
ATG4A-206ENST00000457035 TCP11X2Q5H9J9 407 aa10.75□□□□□ -0.69
ATG4A-206ENST00000457035 MIIPQ5JXC2 388 aa10.75□□□□□ -0.69
ATG4A-206ENST00000457035 FAM171BQ6P995 826 aa10.75□□□□□ -0.69
ATG4A-206ENST00000457035 RTL10Q7L3V2 364 aa10.75□□□□□ -0.69
ATG4A-206ENST00000457035 FAM114A1Q8IWE2 563 aa10.75□□□□□ -0.69
ATG4A-206ENST00000457035 TCEAL8Q8IYN2 117 aa10.75□□□□□ -0.69
ATG4A-206ENST00000457035 ATAD1Q8NBU5 361 aa10.75□□□□□ -0.69
ATG4A-206ENST00000457035 EHBP1Q8NDI1 1231 aa10.75□□□□□ -0.69
ATG4A-206ENST00000457035 CMASQ8NFW8 434 aaPredicted RBP10.75□□□□□ -0.69
ATG4A-206ENST00000457035 FAM122AQ96E09 287 aa10.75□□□□□ -0.69
ATG4A-206ENST00000457035 TUBGCP2Q9BSJ2 902 aa10.75□□□□□ -0.69
ATG4A-206ENST00000457035 ADAM7Q9H2U9 754 aa10.75□□□□□ -0.69
ATG4A-206ENST00000457035 SMYD3Q9H7B4 428 aa10.75□□□□□ -0.69
ATG4A-206ENST00000457035 TMLHEQ9NVH6 421 aa10.75□□□□□ -0.69
ATG4A-206ENST00000457035 DENND4CQ5VZ89 1909 aa10.74□□□□□ -0.69
ATG4A-206ENST00000457035 CCDC195A0A1B0GUA6 201 aa10.74□□□□□ -0.69
ATG4A-206ENST00000457035 MYBPHLA2RUH7 354 aa10.74□□□□□ -0.69
ATG4A-206ENST00000457035 MTMR11A4FU01 709 aa10.74□□□□□ -0.69
ATG4A-206ENST00000457035 FAM86C2PA6NEL3 165 aa10.74□□□□□ -0.69
ATG4A-206ENST00000457035 GRXCR2A6NFK2 248 aa10.74□□□□□ -0.69
ATG4A-206ENST00000457035 KCNJ18B7U540 433 aa10.74□□□□□ -0.69
ATG4A-206ENST00000457035 MBTPS2O43462 519 aa10.74□□□□□ -0.69
ATG4A-206ENST00000457035 P4HA1P13674 534 aa10.74□□□□□ -0.69
ATG4A-206ENST00000457035 CPB1P15086 417 aa10.74□□□□□ -0.69
ATG4A-206ENST00000457035 ZNF18P17022 549 aa10.74□□□□□ -0.69
ATG4A-206ENST00000457035 EEF1GP26641 437 aaKnown RBP10.74□□□□□ -0.69
ATG4A-206ENST00000457035 PCSK1P29120 753 aa10.74□□□□□ -0.69
ATG4A-206ENST00000457035 MTIF2P46199 727 aaKnown RBP10.74□□□□□ -0.69
ATG4A-206ENST00000457035 RAP1GAPP47736 663 aa10.74□□□□□ -0.69
ATG4A-206ENST00000457035 MYL5Q02045 173 aa10.74□□□□□ -0.69
ATG4A-206ENST00000457035 ITIH3Q06033 890 aa10.74□□□□□ -0.69
ATG4A-206ENST00000457035 SMARCB1Q12824 385 aa10.74□□□□□ -0.69
ATG4A-206ENST00000457035 DUSP4Q13115 394 aa10.74□□□□□ -0.69
ATG4A-206ENST00000457035 KCNJ12Q14500 433 aa10.74□□□□□ -0.69
ATG4A-206ENST00000457035 IQCB1Q15051 598 aa10.74□□□□□ -0.69
ATG4A-206ENST00000457035 MAN2A1Q16706 1144 aa10.74□□□□□ -0.69
ATG4A-206ENST00000457035 SLC39A12Q504Y0 691 aa10.74□□□□□ -0.69
ATG4A-206ENST00000457035 WDR44Q5JSH3 913 aa10.74□□□□□ -0.69
ATG4A-206ENST00000457035 INTS6LQ5JSJ4 861 aaKnown RBP10.74□□□□□ -0.69
ATG4A-206ENST00000457035 RARS2Q5T160 578 aaKnown RBP10.74□□□□□ -0.69
ATG4A-206ENST00000457035 TMC5Q6UXY8 1006 aa10.74□□□□□ -0.69
ATG4A-206ENST00000457035 GPR149Q86SP6 731 aa10.74□□□□□ -0.69
ATG4A-206ENST00000457035 DHX40Q8IX18 779 aaKnown RBP10.74□□□□□ -0.69
ATG4A-206ENST00000457035 DCP1BQ8IZD4 617 aaKnown RBP10.74□□□□□ -0.69
ATG4A-206ENST00000457035 OR6B3Q8NGW1 331 aa10.74□□□□□ -0.69
ATG4A-206ENST00000457035 SUSD6Q92537 303 aa10.74□□□□□ -0.69
ATG4A-206ENST00000457035 ZNF707Q96C28 371 aaPredicted RBP10.74□□□□□ -0.69
ATG4A-206ENST00000457035 PGLYRP2Q96PD5 576 aa10.74□□□□□ -0.69
ATG4A-206ENST00000457035 LRFN3Q9BTN0 628 aa10.74□□□□□ -0.69
ATG4A-206ENST00000457035 APOL5Q9BWW9 433 aa10.74□□□□□ -0.69
ATG4A-206ENST00000457035 RHOBTB2Q9BYZ6 727 aa10.74□□□□□ -0.69
ATG4A-206ENST00000457035 PRKD2Q9BZL6 878 aa10.74□□□□□ -0.69
ATG4A-206ENST00000457035 IMPG2Q9BZV3 1241 aa10.74□□□□□ -0.69
ATG4A-206ENST00000457035 NIF3L1Q9GZT8 377 aa10.74□□□□□ -0.69
ATG4A-206ENST00000457035 NAT10Q9H0A0 1025 aaKnown RBP10.74□□□□□ -0.69
ATG4A-206ENST00000457035 CRISPLD1Q9H336 500 aa10.74□□□□□ -0.69
ATG4A-206ENST00000457035 SNX25Q9H3E2 840 aa10.74□□□□□ -0.69
ATG4A-206ENST00000457035 SFXN1Q9H9B4 322 aa10.74□□□□□ -0.69
ATG4A-206ENST00000457035 CYP3A43Q9HB55 503 aa10.74□□□□□ -0.69
ATG4A-206ENST00000457035 CRTAC1Q9NQ79 661 aa10.74□□□□□ -0.69
ATG4A-206ENST00000457035 ZDHHC7Q9NXF8 308 aa10.74□□□□□ -0.69
ATG4A-206ENST00000457035 HSFX1Q9UBD0 423 aa10.74□□□□□ -0.69
ATG4A-206ENST00000457035 MAGEC2Q9UBF1 373 aaPredicted RBP10.74□□□□□ -0.69
ATG4A-206ENST00000457035 GTF3C4Q9UKN8 822 aa10.74□□□□□ -0.69
ATG4A-206ENST00000457035 CDH9Q9ULB4 789 aa10.74□□□□□ -0.69
ATG4A-206ENST00000457035 GTPBP10A4D1E9 387 aaKnown RBP10.73□□□□□ -0.69
ATG4A-206ENST00000457035 A8MXQ7 604 aa10.73□□□□□ -0.69
ATG4A-206ENST00000457035 C8AP07357 584 aa10.73□□□□□ -0.69
ATG4A-206ENST00000457035 HNRNPA1P09651 372 aaKnown RBP eCLIP10.73□□□□□ -0.69
ATG4A-206ENST00000457035 IL9P15248 144 aa10.73□□□□□ -0.69
ATG4A-206ENST00000457035 PTPN1P18031 435 aaKnown RBP10.73□□□□□ -0.69
ATG4A-206ENST00000457035 HOXA9P31269 272 aa10.73□□□□□ -0.69
ATG4A-206ENST00000457035 ELF1P32519 619 aa10.73□□□□□ -0.69
ATG4A-206ENST00000457035 PLA2G5P39877 138 aa10.73□□□□□ -0.69
ATG4A-206ENST00000457035 ZNF165P49910 485 aa10.73□□□□□ -0.69
ATG4A-206ENST00000457035 CDR1P51861 262 aa10.73□□□□□ -0.69
ATG4A-206ENST00000457035 TSPY1Q01534 308 aa10.73□□□□□ -0.69
ATG4A-206ENST00000457035 INCA1Q0VD86 236 aa10.73□□□□□ -0.69
ATG4A-206ENST00000457035 CETN1Q12798 172 aa10.73□□□□□ -0.69
ATG4A-206ENST00000457035 SMAD4Q13485 552 aaKnown RBP10.73□□□□□ -0.69
ATG4A-206ENST00000457035 CCDC142Q17RM4 750 aa10.73□□□□□ -0.69
ATG4A-206ENST00000457035 PUS10Q3MIT2 529 aaKnown RBP10.73□□□□□ -0.69
ATG4A-206ENST00000457035 VWA3BQ502W6 1294 aa10.73□□□□□ -0.69
ATG4A-206ENST00000457035 PTCRAQ6ISU1 281 aaPredicted RBP10.73□□□□□ -0.69
ATG4A-206ENST00000457035 CYP26C1Q6V0L0 522 aa10.73□□□□□ -0.69
ATG4A-206ENST00000457035 SCARA5Q6ZMJ2 495 aa10.73□□□□□ -0.69
ATG4A-206ENST00000457035 CCDC149Q6ZUS6 474 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms