RNA–Protein interactions for RNA: ENST00000456174.6

HDAC9-218, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-218ENST00000456174 DEPDC1Q5TB30 811 aa8.04□□□□□ -1.12
HDAC9-218ENST00000456174 KLHL35Q6PF15 583 aa8.04□□□□□ -1.12
HDAC9-218ENST00000456174 TRIM59Q8IWR1 403 aa8.04□□□□□ -1.12
HDAC9-218ENST00000456174 TAF4BQ92750 862 aa8.04□□□□□ -1.12
HDAC9-218ENST00000456174 SLC7A6OSQ96CW6 309 aaPredicted RBP8.04□□□□□ -1.12
HDAC9-218ENST00000456174 PSMB7Q99436 277 aa8.04□□□□□ -1.12
HDAC9-218ENST00000456174 TBC1D10AQ9BXI6 508 aa8.04□□□□□ -1.12
HDAC9-218ENST00000456174 FAM117AQ9C073 453 aa8.04□□□□□ -1.12
HDAC9-218ENST00000456174 R3HDMLQ9H3Y0 253 aa8.04□□□□□ -1.12
HDAC9-218ENST00000456174 ANKEF1Q9NU02 776 aa8.04□□□□□ -1.12
HDAC9-218ENST00000456174 AGPAT5Q9NUQ2 364 aa8.04□□□□□ -1.12
HDAC9-218ENST00000456174 SCHIP1Q9P0W5 487 aaPredicted RBP8.04□□□□□ -1.12
HDAC9-218ENST00000456174 STX18Q9P2W9 335 aaKnown RBP8.04□□□□□ -1.12
HDAC9-218ENST00000456174 GABBR1Q9UBS5 961 aa8.04□□□□□ -1.12
HDAC9-218ENST00000456174 ZNHIT2Q9UHR6 403 aa8.04□□□□□ -1.12
HDAC9-218ENST00000456174 CARD8Q9Y2G2 431 aa8.04□□□□□ -1.12
HDAC9-218ENST00000456174 UBE4BO95155 1302 aa8.04□□□□□ -1.12
HDAC9-218ENST00000456174 CCDC169A6NNP5 214 aa8.03□□□□□ -1.12
HDAC9-218ENST00000456174 CLIC2O15247 247 aa8.03□□□□□ -1.12
HDAC9-218ENST00000456174 TGFB1I1O43294 461 aa8.03□□□□□ -1.12
HDAC9-218ENST00000456174 SORBS3O60504 671 aa8.03□□□□□ -1.12
HDAC9-218ENST00000456174 ENTPD5O75356 428 aa8.03□□□□□ -1.12
HDAC9-218ENST00000456174 NR3C1P04150 777 aa8.03□□□□□ -1.12
HDAC9-218ENST00000456174 MYCLP1P12525 358 aaPredicted RBP8.03□□□□□ -1.12
HDAC9-218ENST00000456174 NPEPPSP55786 919 aa8.03□□□□□ -1.12
HDAC9-218ENST00000456174 ACTR2P61160 394 aa8.03□□□□□ -1.12
HDAC9-218ENST00000456174 SP2Q02086 613 aa8.03□□□□□ -1.12
HDAC9-218ENST00000456174 GRM2Q14416 872 aa8.03□□□□□ -1.12
HDAC9-218ENST00000456174 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.03□□□□□ -1.12
HDAC9-218ENST00000456174 PLA2G4FQ68DD2 849 aa8.03□□□□□ -1.12
HDAC9-218ENST00000456174 SWSAP1Q6NVH7 229 aa8.03□□□□□ -1.12
HDAC9-218ENST00000456174 C4orf50Q6ZRC1 276 aa8.03□□□□□ -1.12
HDAC9-218ENST00000456174 ANO5Q75V66 913 aa8.03□□□□□ -1.12
HDAC9-218ENST00000456174 ECHDC2Q86YB7 292 aa8.03□□□□□ -1.12
HDAC9-218ENST00000456174 CROCCP3Q8IVE0 287 aa8.03□□□□□ -1.12
HDAC9-218ENST00000456174 KSR1Q8IVT5 923 aa8.03□□□□□ -1.12
HDAC9-218ENST00000456174 KBTBD2Q8IY47 623 aa8.03□□□□□ -1.12
HDAC9-218ENST00000456174 FAM133AQ8N9E0 248 aa8.03□□□□□ -1.12
HDAC9-218ENST00000456174 FBXO22Q8NEZ5 403 aa8.03□□□□□ -1.12
HDAC9-218ENST00000456174 PPP1R14CQ8TAE6 165 aa8.03□□□□□ -1.12
HDAC9-218ENST00000456174 SCFD2Q8WU76 684 aa8.03□□□□□ -1.12
HDAC9-218ENST00000456174 GRAMD1AQ96CP6 724 aa8.03□□□□□ -1.12
HDAC9-218ENST00000456174 NOX5Q96PH1 765 aa8.03□□□□□ -1.12
HDAC9-218ENST00000456174 EPB41L4BQ9H329 900 aa8.03□□□□□ -1.12
HDAC9-218ENST00000456174 KRT82Q9NSB4 513 aa8.03□□□□□ -1.12
HDAC9-218ENST00000456174 EURLQ9NYK6 297 aa8.03□□□□□ -1.12
HDAC9-218ENST00000456174 KLHL14Q9P2G3 628 aa8.03□□□□□ -1.12
HDAC9-218ENST00000456174 SIK3Q9Y2K2 1263 aa8.03□□□□□ -1.12
HDAC9-218ENST00000456174 TELO2Q9Y4R8 837 aa8.03□□□□□ -1.12
HDAC9-218ENST00000456174 NUMBLQ9Y6R0 609 aa8.03□□□□□ -1.12
HDAC9-218ENST00000456174 MCM3APO60318 1980 aa8.03□□□□□ -1.12
HDAC9-218ENST00000456174 UNCXA6NJT0 531 aa8.03□□□□□ -1.12
HDAC9-218ENST00000456174 DKC1O60832 514 aaKnown RBP eCLIP8.03□□□□□ -1.12
HDAC9-218ENST00000456174 ZCCHC18P0CG32 403 aa8.03□□□□□ -1.12
HDAC9-218ENST00000456174 COL6A2P12110 1019 aa8.03□□□□□ -1.12
HDAC9-218ENST00000456174 ENDOUP21128 410 aaKnown RBP8.03□□□□□ -1.12
HDAC9-218ENST00000456174 EDNRBP24530 442 aa8.03□□□□□ -1.12
HDAC9-218ENST00000456174 COPB2P35606 906 aa8.03□□□□□ -1.12
HDAC9-218ENST00000456174 RASSF2P50749 326 aa8.03□□□□□ -1.12
HDAC9-218ENST00000456174 IRF5Q13568 498 aa8.03□□□□□ -1.12
HDAC9-218ENST00000456174 ABHD15Q6UXT9 468 aa8.03□□□□□ -1.12
HDAC9-218ENST00000456174 TRIM67Q6ZTA4 783 aa8.03□□□□□ -1.12
HDAC9-218ENST00000456174 CYFIP1Q7L576 1253 aa8.03□□□□□ -1.12
HDAC9-218ENST00000456174 FRMD5Q7Z6J6 570 aa8.03□□□□□ -1.12
HDAC9-218ENST00000456174 PATL1Q86TB9 770 aaKnown RBP8.03□□□□□ -1.12
HDAC9-218ENST00000456174 USP33Q8TEY7 942 aa8.03□□□□□ -1.12
HDAC9-218ENST00000456174 VPS50Q96JG6 964 aa8.03□□□□□ -1.12
HDAC9-218ENST00000456174 CCDC42Q96M95 316 aa8.03□□□□□ -1.12
HDAC9-218ENST00000456174 DDX50Q9BQ39 737 aaKnown RBP8.03□□□□□ -1.12
HDAC9-218ENST00000456174 STMN4Q9H169 189 aaPredicted RBP8.03□□□□□ -1.12
HDAC9-218ENST00000456174 GBA3Q9H227 469 aa8.03□□□□□ -1.12
HDAC9-218ENST00000456174 IKZF4Q9H2S9 585 aa8.03□□□□□ -1.12
HDAC9-218ENST00000456174 TPK1Q9H3S4 243 aa8.03□□□□□ -1.12
HDAC9-218ENST00000456174 MMRN2Q9H8L6 949 aa8.03□□□□□ -1.12
HDAC9-218ENST00000456174 FAM207AQ9NSI2 230 aaPredicted RBP8.03□□□□□ -1.12
HDAC9-218ENST00000456174 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.03□□□□□ -1.12
HDAC9-218ENST00000456174 RABL2AQ9UBK7 228 aaPredicted RBP8.03□□□□□ -1.12
HDAC9-218ENST00000456174 ARMCX3Q9UH62 379 aaPredicted RBP8.03□□□□□ -1.12
HDAC9-218ENST00000456174 RASAL2Q9UJF2 1139 aa8.03□□□□□ -1.12
HDAC9-218ENST00000456174 PLXNA1Q9UIW2 1896 aa8.02□□□□□ -1.12
HDAC9-218ENST00000456174 TCP11X1B4DZS4 312 aa8.02□□□□□ -1.13
HDAC9-218ENST00000456174 K7ENM7 598 aa8.02□□□□□ -1.13
HDAC9-218ENST00000456174 ZNF862O60290 1169 aa8.02□□□□□ -1.13
HDAC9-218ENST00000456174 HNRNPCL1O60812 293 aaKnown RBP8.02□□□□□ -1.13
HDAC9-218ENST00000456174 ZBED1O96006 694 aa8.02□□□□□ -1.13
HDAC9-218ENST00000456174 PGK2P07205 417 aa8.02□□□□□ -1.13
HDAC9-218ENST00000456174 MAPTP10636 758 aaKnown RBP8.02□□□□□ -1.13
HDAC9-218ENST00000456174 PLS3P13797 630 aa8.02□□□□□ -1.13
HDAC9-218ENST00000456174 MARK3P27448 753 aa8.02□□□□□ -1.13
HDAC9-218ENST00000456174 HOXD10P28358 340 aa8.02□□□□□ -1.13
HDAC9-218ENST00000456174 CASP4P49662 377 aa8.02□□□□□ -1.13
HDAC9-218ENST00000456174 PFKPQ01813 784 aa8.02□□□□□ -1.13
HDAC9-218ENST00000456174 KCNMA1Q12791 1236 aa8.02□□□□□ -1.13
HDAC9-218ENST00000456174 KCTD2Q14681 263 aa8.02□□□□□ -1.13
HDAC9-218ENST00000456174 KHDC1Q4VXA5 237 aaKnown RBP8.02□□□□□ -1.13
HDAC9-218ENST00000456174 C6orf118Q5T5N4 469 aa8.02□□□□□ -1.13
HDAC9-218ENST00000456174 FAM102BQ5T8I3 360 aa8.02□□□□□ -1.13
HDAC9-218ENST00000456174 WDR78Q5VTH9 848 aa8.02□□□□□ -1.13
HDAC9-218ENST00000456174 LRRC8BQ6P9F7 803 aa8.02□□□□□ -1.13
HDAC9-218ENST00000456174 ACAD11Q709F0 780 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms