RNA–Protein interactions for RNA: ENST00000455727.6

LDLR-202, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-202ENST00000455727 VPS41P49754 854 aa15.89■□□□□ 0.13
LDLR-202ENST00000455727 ZNF268Q14587 947 aaPredicted RBP15.89■□□□□ 0.13
LDLR-202ENST00000455727 OASLQ15646 514 aaKnown RBP15.89■□□□□ 0.13
LDLR-202ENST00000455727 QPCTQ16769 361 aa15.89■□□□□ 0.13
LDLR-202ENST00000455727 LONRF1Q17RB8 773 aa15.89■□□□□ 0.13
LDLR-202ENST00000455727 GKAP1Q5VSY0 366 aaPredicted RBP15.89■□□□□ 0.13
LDLR-202ENST00000455727 KAZNQ674X7 775 aa15.89■□□□□ 0.13
LDLR-202ENST00000455727 JADE1Q6IE81 842 aa15.89■□□□□ 0.13
LDLR-202ENST00000455727 MAMDC4Q6UXC1 1216 aa15.89■□□□□ 0.13
LDLR-202ENST00000455727 CPLX4Q7Z7G2 160 aa15.89■□□□□ 0.13
LDLR-202ENST00000455727 GPRC5AQ8NFJ5 357 aa15.89■□□□□ 0.13
LDLR-202ENST00000455727 SEC16BQ96JE7 1060 aa15.89■□□□□ 0.13
LDLR-202ENST00000455727 FAM118BQ9BPY3 351 aa15.89■□□□□ 0.13
LDLR-202ENST00000455727 FDXACB1Q9BRP7 624 aaPredicted RBP15.89■□□□□ 0.13
LDLR-202ENST00000455727 FRMD8P1Q9BZ68 369 aaPredicted RBP15.89■□□□□ 0.13
LDLR-202ENST00000455727 PDZD7Q9H5P4 517 aa15.89■□□□□ 0.13
LDLR-202ENST00000455727 CYTH4Q9UIA0 394 aa15.89■□□□□ 0.13
LDLR-202ENST00000455727 ZNF148Q9UQR1 794 aa15.89■□□□□ 0.13
LDLR-202ENST00000455727 PLXNB2O15031 1838 aa15.89■□□□□ 0.13
LDLR-202ENST00000455727 DNALI1O14645 258 aaPredicted RBP15.89■□□□□ 0.13
LDLR-202ENST00000455727 CILPO75339 1184 aa15.89■□□□□ 0.13
LDLR-202ENST00000455727 ABHD2P08910 425 aa15.89■□□□□ 0.13
LDLR-202ENST00000455727 P4HA1P13674 534 aa15.89■□□□□ 0.13
LDLR-202ENST00000455727 GJA5P36382 358 aa15.89■□□□□ 0.13
LDLR-202ENST00000455727 VCPP55072 806 aaKnown RBP15.89■□□□□ 0.13
LDLR-202ENST00000455727 P3H1Q32P28 736 aa15.89■□□□□ 0.13
LDLR-202ENST00000455727 TXNRD3NBQ6F5E7 133 aa15.89■□□□□ 0.13
LDLR-202ENST00000455727 ZNF467Q7Z7K2 595 aaPredicted RBP15.89■□□□□ 0.13
LDLR-202ENST00000455727 SLC4A11Q8NBS3 891 aa15.89■□□□□ 0.13
LDLR-202ENST00000455727 SDCBP2Q9H190 292 aa15.89■□□□□ 0.13
LDLR-202ENST00000455727 LGALS13Q9UHV8 139 aa15.89■□□□□ 0.13
LDLR-202ENST00000455727 LRRD1A4D1F6 860 aa15.88■□□□□ 0.13
LDLR-202ENST00000455727 C3orf70A6NLC5 250 aaPredicted RBP15.88■□□□□ 0.13
LDLR-202ENST00000455727 STAU1O95793 577 aaKnown RBP15.88■□□□□ 0.13
LDLR-202ENST00000455727 ITGB3P05106 788 aa15.88■□□□□ 0.13
LDLR-202ENST00000455727 PSMA2P25787 234 aa15.88■□□□□ 0.13
LDLR-202ENST00000455727 RAP1GAPP47736 663 aa15.88■□□□□ 0.13
LDLR-202ENST00000455727 GABRB2P47870 512 aa15.88■□□□□ 0.13
LDLR-202ENST00000455727 CDH8P55286 799 aa15.88■□□□□ 0.13
LDLR-202ENST00000455727 PSMC1P62191 440 aaKnown RBP15.88■□□□□ 0.13
LDLR-202ENST00000455727 IGBP1P78318 339 aa15.88■□□□□ 0.13
LDLR-202ENST00000455727 PTPN11Q06124 597 aaPredicted RBP15.88■□□□□ 0.13
LDLR-202ENST00000455727 STAT4Q14765 748 aa15.88■□□□□ 0.13
LDLR-202ENST00000455727 ACAP1Q15027 740 aa15.88■□□□□ 0.13
LDLR-202ENST00000455727 TAZQ16635 292 aa15.88■□□□□ 0.13
LDLR-202ENST00000455727 HADHQ16836 314 aaKnown RBP15.88■□□□□ 0.13
LDLR-202ENST00000455727 SLC10A6Q3KNW5 377 aa15.88■□□□□ 0.13
LDLR-202ENST00000455727 DPY19L2Q6NUT2 758 aa15.88■□□□□ 0.13
LDLR-202ENST00000455727 NT5DC4Q86YG4 428 aa15.88■□□□□ 0.13
LDLR-202ENST00000455727 CACNA2D3Q8IZS8 1091 aa15.88■□□□□ 0.13
LDLR-202ENST00000455727 ARHGEF2Q92974 986 aaKnown RBP15.88■□□□□ 0.13
LDLR-202ENST00000455727 TMEM176AQ96HP8 235 aa15.88■□□□□ 0.13
LDLR-202ENST00000455727 CCDC77Q9BR77 488 aa15.88■□□□□ 0.13
LDLR-202ENST00000455727 CITO14578 2027 aa15.88■□□□□ 0.13
LDLR-202ENST00000455727 LRCH4O75427 683 aa15.88■□□□□ 0.13
LDLR-202ENST00000455727 HMGCRP04035 888 aa15.88■□□□□ 0.13
LDLR-202ENST00000455727 EPHX2P34913 555 aa15.88■□□□□ 0.13
LDLR-202ENST00000455727 SLC25A11Q02978 314 aaKnown RBP15.88■□□□□ 0.13
LDLR-202ENST00000455727 PPARDQ03181 441 aa15.88■□□□□ 0.13
LDLR-202ENST00000455727 IFT88Q13099 833 aa15.88■□□□□ 0.13
LDLR-202ENST00000455727 CNGA2Q16280 664 aa15.88■□□□□ 0.13
LDLR-202ENST00000455727 C9orf131Q5VYM1 1079 aa15.88■□□□□ 0.13
LDLR-202ENST00000455727 XYLT1Q86Y38 959 aa15.88■□□□□ 0.13
LDLR-202ENST00000455727 TTC39CQ8N584 583 aa15.88■□□□□ 0.13
LDLR-202ENST00000455727 SLC35B2Q8TB61 432 aa15.88■□□□□ 0.13
LDLR-202ENST00000455727 CPXM1Q96SM3 734 aa15.88■□□□□ 0.13
LDLR-202ENST00000455727 SPON1Q9HCB6 807 aa15.88■□□□□ 0.13
LDLR-202ENST00000455727 UNCXA6NJT0 531 aa15.87■□□□□ 0.13
LDLR-202ENST00000455727 STRNO43815 780 aa15.87■□□□□ 0.13
LDLR-202ENST00000455727 FSBPO95073 299 aa15.87■□□□□ 0.13
LDLR-202ENST00000455727 ARF4P18085 180 aaPredicted RBP15.87■□□□□ 0.13
LDLR-202ENST00000455727 MORF4L2Q15014 288 aa15.87■□□□□ 0.13
LDLR-202ENST00000455727 TTC13Q8NBP0 860 aa15.87■□□□□ 0.13
LDLR-202ENST00000455727 CABS1Q96KC9 395 aa15.87■□□□□ 0.13
LDLR-202ENST00000455727 RBM15Q96T37 977 aaKnown RBP eCLIP15.87■□□□□ 0.139e-8■■■■□ 20.5
LDLR-202ENST00000455727 C16orf70Q9BSU1 422 aa15.87■□□□□ 0.13
LDLR-202ENST00000455727 FHDC1Q9C0D6 1143 aaPredicted RBP15.87■□□□□ 0.13
LDLR-202ENST00000455727 ELOVL4Q9GZR5 314 aa15.87■□□□□ 0.13
LDLR-202ENST00000455727 SMYD3Q9H7B4 428 aa15.87■□□□□ 0.13
LDLR-202ENST00000455727 TPX2Q9ULW0 747 aaKnown RBP15.87■□□□□ 0.13
LDLR-202ENST00000455727 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.87■□□□□ 0.13
LDLR-202ENST00000455727 AKT3Q9Y243 479 aa15.87■□□□□ 0.13
LDLR-202ENST00000455727 SLC45A1Q9Y2W3 748 aa15.87■□□□□ 0.13
LDLR-202ENST00000455727 C2CD2Q9Y426 696 aa15.87■□□□□ 0.13
LDLR-202ENST00000455727 GOLGA8SH3BPF8 625 aa15.86■□□□□ 0.13
LDLR-202ENST00000455727 CDH16O75309 829 aa15.86■□□□□ 0.13
LDLR-202ENST00000455727 CYP2C8P10632 490 aa15.86■□□□□ 0.13
LDLR-202ENST00000455727 VDRP11473 427 aa15.86■□□□□ 0.13
LDLR-202ENST00000455727 ADORA2AP29274 412 aa15.86■□□□□ 0.13
LDLR-202ENST00000455727 MAGEA4P43358 317 aa15.86■□□□□ 0.13
LDLR-202ENST00000455727 LIG3P49916 1009 aa15.86■□□□□ 0.13
LDLR-202ENST00000455727 ARSEP51690 589 aa15.86■□□□□ 0.13
LDLR-202ENST00000455727 CCDC142Q17RM4 750 aa15.86■□□□□ 0.13
LDLR-202ENST00000455727 MTHFD1LQ6UB35 978 aa15.86■□□□□ 0.13
LDLR-202ENST00000455727 ILDR2Q71H61 639 aa15.86■□□□□ 0.13
LDLR-202ENST00000455727 ARFGAP1Q8N6T3 406 aa15.86■□□□□ 0.13
LDLR-202ENST00000455727 JOSD2Q8TAC2 188 aa15.86■□□□□ 0.13
LDLR-202ENST00000455727 P3H4Q92791 437 aa15.86■□□□□ 0.13
LDLR-202ENST00000455727 SLC10A4Q96EP9 437 aa15.86■□□□□ 0.13
LDLR-202ENST00000455727 MCRS1Q96EZ8 462 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms