RNA–Protein interactions for RNA: ENST00000454704.5

GTF3C2-206, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 1 (best)

Gene GTF3C2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-206ENST00000454704 CCDC25Q86WR0 208 aa11.18□□□□□ -0.62
GTF3C2-206ENST00000454704 WDR49Q8IV35 697 aa11.18□□□□□ -0.62
GTF3C2-206ENST00000454704 LRRC34Q8IZ02 419 aa11.18□□□□□ -0.62
GTF3C2-206ENST00000454704 NIPA2Q8N8Q9 360 aa11.18□□□□□ -0.62
GTF3C2-206ENST00000454704 TTC13Q8NBP0 860 aa11.18□□□□□ -0.62
GTF3C2-206ENST00000454704 ZSWIM2Q8NEG5 633 aa11.18□□□□□ -0.62
GTF3C2-206ENST00000454704 CHST13Q8NET6 341 aa11.18□□□□□ -0.62
GTF3C2-206ENST00000454704 FAM212AQ96EL1 285 aa11.18□□□□□ -0.62
GTF3C2-206ENST00000454704 FAM167AQ96KS9 214 aa11.18□□□□□ -0.62
GTF3C2-206ENST00000454704 PRMT1Q99873 361 aaKnown RBP11.18□□□□□ -0.62
GTF3C2-206ENST00000454704 TEX13BQ9BXU2 312 aa11.18□□□□□ -0.62
GTF3C2-206ENST00000454704 FAM124BQ9H5Z6 455 aaPredicted RBP11.18□□□□□ -0.62
GTF3C2-206ENST00000454704 SSU72Q9NP77 194 aaKnown RBP11.18□□□□□ -0.62
GTF3C2-206ENST00000454704 PRDM5Q9NQX1 630 aaPredicted RBP11.18□□□□□ -0.62
GTF3C2-206ENST00000454704 HOMER2Q9NSB8 354 aa11.18□□□□□ -0.62
GTF3C2-206ENST00000454704 NKIRAS1Q9NYS0 192 aa11.18□□□□□ -0.62
GTF3C2-206ENST00000454704 RBAKQ9NYW8 714 aaPredicted RBP11.18□□□□□ -0.62
GTF3C2-206ENST00000454704 NINJ2Q9NZG7 142 aa11.18□□□□□ -0.62
GTF3C2-206ENST00000454704 STRIP2Q9ULQ0 834 aa11.18□□□□□ -0.62
GTF3C2-206ENST00000454704 USP15Q9Y4E8 981 aaPredicted RBP11.18□□□□□ -0.62
GTF3C2-206ENST00000454704 LRRC37A2A6NM11 1700 aa11.17□□□□□ -0.62
GTF3C2-206ENST00000454704 KBTBD13C9JR72 458 aa11.17□□□□□ -0.62
GTF3C2-206ENST00000454704 K7ERI5 159 aa11.17□□□□□ -0.62
GTF3C2-206ENST00000454704 DNALI1O14645 258 aaPredicted RBP11.17□□□□□ -0.62
GTF3C2-206ENST00000454704 TP73O15350 636 aa11.17□□□□□ -0.62
GTF3C2-206ENST00000454704 MGRN1O60291 552 aa11.17□□□□□ -0.62
GTF3C2-206ENST00000454704 ATP5HO75947 161 aa11.17□□□□□ -0.62
GTF3C2-206ENST00000454704 CDH5P33151 784 aaPredicted RBP11.17□□□□□ -0.62
GTF3C2-206ENST00000454704 ARL2P36404 184 aa11.17□□□□□ -0.62
GTF3C2-206ENST00000454704 KCNJ1P48048 391 aa11.17□□□□□ -0.62
GTF3C2-206ENST00000454704 ZNF132P52740 706 aa11.17□□□□□ -0.62
GTF3C2-206ENST00000454704 GSCP56915 257 aaPredicted RBP11.17□□□□□ -0.62
GTF3C2-206ENST00000454704 IFI35P80217 286 aaPredicted RBP11.17□□□□□ -0.62
GTF3C2-206ENST00000454704 MAMLD1Q13495 774 aa11.17□□□□□ -0.62
GTF3C2-206ENST00000454704 MORF4L2Q15014 288 aa11.17□□□□□ -0.62
GTF3C2-206ENST00000454704 TRIM60Q495X7 471 aa11.17□□□□□ -0.62
GTF3C2-206ENST00000454704 ZC3H12AQ5D1E8 599 aaKnown RBP11.17□□□□□ -0.62
GTF3C2-206ENST00000454704 TDRD10Q5VZ19 366 aaKnown RBP11.17□□□□□ -0.62
GTF3C2-206ENST00000454704 IZUMO3Q5VZ72 239 aa11.17□□□□□ -0.62
GTF3C2-206ENST00000454704 SNRNP48Q6IEG0 339 aaKnown RBP11.17□□□□□ -0.62
GTF3C2-206ENST00000454704 SWSAP1Q6NVH7 229 aa11.17□□□□□ -0.62
GTF3C2-206ENST00000454704 RGS9BPQ6ZS82 235 aa11.17□□□□□ -0.62
GTF3C2-206ENST00000454704 POLNQ7Z5Q5 900 aa11.17□□□□□ -0.62
GTF3C2-206ENST00000454704 ANKS1BQ7Z6G8 1248 aa11.17□□□□□ -0.62
GTF3C2-206ENST00000454704 BRSK2Q8IWQ3 736 aa11.17□□□□□ -0.62
GTF3C2-206ENST00000454704 UBR7Q8N806 425 aa11.17□□□□□ -0.62
GTF3C2-206ENST00000454704 RBBP8NLQ8NC74 664 aaPredicted RBP11.17□□□□□ -0.62
GTF3C2-206ENST00000454704 SHCBP1Q8NEM2 672 aa11.17□□□□□ -0.62
GTF3C2-206ENST00000454704 MDM1Q8TC05 714 aa11.17□□□□□ -0.62
GTF3C2-206ENST00000454704 C1orf54Q8WWF1 131 aa11.17□□□□□ -0.62
GTF3C2-206ENST00000454704 SLC7A3Q8WY07 619 aa11.17□□□□□ -0.62
GTF3C2-206ENST00000454704 ZNF516Q92618 1163 aa11.17□□□□□ -0.62
GTF3C2-206ENST00000454704 ATG4CQ96DT6 458 aa11.17□□□□□ -0.62
GTF3C2-206ENST00000454704 BTBD6Q96KE9 485 aa11.17□□□□□ -0.62
GTF3C2-206ENST00000454704 ZNF302Q9NR11 478 aa11.17□□□□□ -0.62
GTF3C2-206ENST00000454704 TOPORSQ9NS56 1045 aaPredicted RBP11.17□□□□□ -0.62
GTF3C2-206ENST00000454704 CHST7Q9NS84 486 aa11.17□□□□□ -0.62
GTF3C2-206ENST00000454704 NRBP2Q9NSY0 501 aa11.17□□□□□ -0.62
GTF3C2-206ENST00000454704 HOXC10Q9NYD6 342 aa11.17□□□□□ -0.62
GTF3C2-206ENST00000454704 FBXO40Q9UH90 709 aa11.17□□□□□ -0.62
GTF3C2-206ENST00000454704 SLC24A2Q9UI40 661 aa11.17□□□□□ -0.62
GTF3C2-206ENST00000454704 ZNF214Q9UL59 606 aaPredicted RBP11.17□□□□□ -0.62
GTF3C2-206ENST00000454704 SMG5Q9UPR3 1016 aaKnown RBP11.17□□□□□ -0.62
GTF3C2-206ENST00000454704 SHOC2Q9UQ13 582 aa11.17□□□□□ -0.62
GTF3C2-206ENST00000454704 ARL2BPQ9Y2Y0 163 aa11.17□□□□□ -0.62
GTF3C2-206ENST00000454704 CEP83Q9Y592 693 aa11.17□□□□□ -0.62
GTF3C2-206ENST00000454704 PCDHB4Q9Y5E5 795 aa11.17□□□□□ -0.62
GTF3C2-206ENST00000454704 SPTBN5Q9NRC6 3674 aaKnown RBP11.16□□□□□ -0.62
GTF3C2-206ENST00000454704 ANK1P16157 1881 aa11.16□□□□□ -0.62
GTF3C2-206ENST00000454704 IGKV6D-21A0A0A0MT36 114 aa11.16□□□□□ -0.62
GTF3C2-206ENST00000454704 A0A0B4J269 797 aa11.16□□□□□ -0.62
GTF3C2-206ENST00000454704 TMEM120BA0PK00 339 aa11.16□□□□□ -0.62
GTF3C2-206ENST00000454704 TLR3O15455 904 aaKnown RBP11.16□□□□□ -0.62
GTF3C2-206ENST00000454704 PRPF4O43172 522 aaKnown RBP eCLIP11.16□□□□□ -0.62
GTF3C2-206ENST00000454704 SEPT4O43236 478 aa11.16□□□□□ -0.62
GTF3C2-206ENST00000454704 GJB6O95452 261 aa11.16□□□□□ -0.62
GTF3C2-206ENST00000454704 RALAP11233 206 aa11.16□□□□□ -0.62
GTF3C2-206ENST00000454704 MMP8P22894 467 aa11.16□□□□□ -0.62
GTF3C2-206ENST00000454704 KLRC2P26717 231 aa11.16□□□□□ -0.62
GTF3C2-206ENST00000454704 POLR2BP30876 1174 aaKnown RBP11.16□□□□□ -0.62
GTF3C2-206ENST00000454704 NOP14P78316 857 aaKnown RBP11.16□□□□□ -0.62
GTF3C2-206ENST00000454704 IL9RQ01113 521 aa11.16□□□□□ -0.62
GTF3C2-206ENST00000454704 STXBP2Q15833 593 aa11.16□□□□□ -0.62
GTF3C2-206ENST00000454704 PRAMEF19Q5SWL8 479 aa11.16□□□□□ -0.62
GTF3C2-206ENST00000454704 WLSQ5T9L3 541 aa11.16□□□□□ -0.62
GTF3C2-206ENST00000454704 FAM160B1Q5W0V3 765 aa11.16□□□□□ -0.62
GTF3C2-206ENST00000454704 RNF43Q68DV7 783 aa11.16□□□□□ -0.62
GTF3C2-206ENST00000454704 FAM109BQ6ICB4 259 aaPredicted RBP11.16□□□□□ -0.62
GTF3C2-206ENST00000454704 VSTM1Q6UX27 236 aa11.16□□□□□ -0.62
GTF3C2-206ENST00000454704 SLC39A5Q6ZMH5 540 aa11.16□□□□□ -0.62
GTF3C2-206ENST00000454704 NCAPG2Q86XI2 1143 aa11.16□□□□□ -0.62
GTF3C2-206ENST00000454704 CCDC60Q8IWA6 550 aaPredicted RBP11.16□□□□□ -0.62
GTF3C2-206ENST00000454704 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.16□□□□□ -0.62
GTF3C2-206ENST00000454704 CCDC63Q8NA47 563 aa11.16□□□□□ -0.62
GTF3C2-206ENST00000454704 TMEM35BQ8NCS4 154 aa11.16□□□□□ -0.62
GTF3C2-206ENST00000454704 ARRDC4Q8NCT1 418 aa11.16□□□□□ -0.62
GTF3C2-206ENST00000454704 TCP11Q8WWU5 503 aa11.16□□□□□ -0.62
GTF3C2-206ENST00000454704 NKD2Q969F2 451 aaPredicted RBP11.16□□□□□ -0.62
GTF3C2-206ENST00000454704 POP1Q99575 1024 aaKnown RBP11.16□□□□□ -0.62
GTF3C2-206ENST00000454704 JPH2Q9BR39 696 aaPredicted RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms