RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 IL9RQ01113 521 aa13.18□□□□□ -0.3
ECHDC1-209ENST00000454591 BNIP1Q12981 228 aa13.18□□□□□ -0.3
ECHDC1-209ENST00000454591 LLGL1Q15334 1064 aa13.18□□□□□ -0.3
ECHDC1-209ENST00000454591 HADHQ16836 314 aaKnown RBP13.18□□□□□ -0.3
ECHDC1-209ENST00000454591 ZNF699Q32M78 642 aa13.18□□□□□ -0.3
ECHDC1-209ENST00000454591 SPDYAQ5MJ70 313 aa13.18□□□□□ -0.3
ECHDC1-209ENST00000454591 WLSQ5T9L3 541 aa13.18□□□□□ -0.3
ECHDC1-209ENST00000454591 CENPUQ71F23 418 aa13.18□□□□□ -0.3
ECHDC1-209ENST00000454591 C9orf72Q96LT7 481 aa13.18□□□□□ -0.3
ECHDC1-209ENST00000454591 FGD4Q96M96 766 aa13.18□□□□□ -0.3
ECHDC1-209ENST00000454591 PWWP2AQ96N64 755 aa13.18□□□□□ -0.3
ECHDC1-209ENST00000454591 CYP3A43Q9HB55 503 aa13.18□□□□□ -0.3
ECHDC1-209ENST00000454591 SAYSD1Q9NPB0 183 aa13.18□□□□□ -0.3
ECHDC1-209ENST00000454591 FGFR1OP2Q9NVK5 253 aa13.18□□□□□ -0.3
ECHDC1-209ENST00000454591 POLR2AP24928 1970 aaKnown RBP13.18□□□□□ -0.3
ECHDC1-209ENST00000454591 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.18□□□□□ -0.3
ECHDC1-209ENST00000454591 A0A0G2JLL6 359 aaPredicted RBP13.18□□□□□ -0.3
ECHDC1-209ENST00000454591 A0A1B0GUA9 196 aa13.18□□□□□ -0.3
ECHDC1-209ENST00000454591 PI4K2BG5E9Z4 385 aa13.18□□□□□ -0.3
ECHDC1-209ENST00000454591 CNMDO75829 334 aa13.18□□□□□ -0.3
ECHDC1-209ENST00000454591 ENDOD1O94919 500 aa13.18□□□□□ -0.3
ECHDC1-209ENST00000454591 STX2P32856 288 aa13.18□□□□□ -0.3
ECHDC1-209ENST00000454591 GTF2A1P52655 376 aaPredicted RBP13.18□□□□□ -0.3
ECHDC1-209ENST00000454591 ELF3P78545 371 aaPredicted RBP13.18□□□□□ -0.3
ECHDC1-209ENST00000454591 VGLL4Q14135 290 aa13.18□□□□□ -0.3
ECHDC1-209ENST00000454591 SNCBQ16143 134 aa13.18□□□□□ -0.3
ECHDC1-209ENST00000454591 KYAT1Q16773 422 aa13.18□□□□□ -0.3
ECHDC1-209ENST00000454591 PTPN20Q4JDL3 420 aa13.18□□□□□ -0.3
ECHDC1-209ENST00000454591 TREML2Q5T2D2 321 aa13.18□□□□□ -0.3
ECHDC1-209ENST00000454591 ATF7IP2Q5U623 682 aa13.18□□□□□ -0.3
ECHDC1-209ENST00000454591 SCARA3Q6AZY7 606 aa13.18□□□□□ -0.3
ECHDC1-209ENST00000454591 CHADLQ6NUI6 762 aa13.18□□□□□ -0.3
ECHDC1-209ENST00000454591 CCDC62Q6P9F0 684 aa13.18□□□□□ -0.3
ECHDC1-209ENST00000454591 PRRT2Q7Z6L0 340 aaPredicted RBP13.18□□□□□ -0.3
ECHDC1-209ENST00000454591 GPC2Q8N158 579 aa13.18□□□□□ -0.3
ECHDC1-209ENST00000454591 GLIS1Q8NBF1 620 aa13.18□□□□□ -0.3
ECHDC1-209ENST00000454591 RNF149Q8NC42 400 aa13.18□□□□□ -0.3
ECHDC1-209ENST00000454591 CMASQ8NFW8 434 aaPredicted RBP13.18□□□□□ -0.3
ECHDC1-209ENST00000454591 CXorf38Q8TB03 319 aa13.18□□□□□ -0.3
ECHDC1-209ENST00000454591 MCRS1Q96EZ8 462 aa13.18□□□□□ -0.3
ECHDC1-209ENST00000454591 TGS1Q96RS0 853 aaKnown RBP13.18□□□□□ -0.3
ECHDC1-209ENST00000454591 DHRS4Q9BTZ2 278 aa13.18□□□□□ -0.3
ECHDC1-209ENST00000454591 YY1AP1Q9H869 796 aa13.18□□□□□ -0.3
ECHDC1-209ENST00000454591 RXFP1Q9HBX9 757 aa13.18□□□□□ -0.3
ECHDC1-209ENST00000454591 STARD13Q9Y3M8 1113 aa13.18□□□□□ -0.3
ECHDC1-209ENST00000454591 PLXNA1Q9UIW2 1896 aa13.17□□□□□ -0.3
ECHDC1-209ENST00000454591 EXOC1LA0A1B0GW35 172 aa13.17□□□□□ -0.3
ECHDC1-209ENST00000454591 RASA4BC9J798 803 aa13.17□□□□□ -0.3
ECHDC1-209ENST00000454591 RASA4O43374 803 aa13.17□□□□□ -0.3
ECHDC1-209ENST00000454591 HBP1O60381 514 aa13.17□□□□□ -0.3
ECHDC1-209ENST00000454591 LRCH4O75427 683 aa13.17□□□□□ -0.3
ECHDC1-209ENST00000454591 FAM155BO75949 473 aa13.17□□□□□ -0.3
ECHDC1-209ENST00000454591 ALADP13716 330 aa13.17□□□□□ -0.3
ECHDC1-209ENST00000454591 ATF7P17544 494 aaPredicted RBP13.17□□□□□ -0.3
ECHDC1-209ENST00000454591 SLC8A1P32418 973 aa13.17□□□□□ -0.3
ECHDC1-209ENST00000454591 RDXP35241 583 aaKnown RBP13.17□□□□□ -0.3
ECHDC1-209ENST00000454591 SSR1P43307 286 aaKnown RBP13.17□□□□□ -0.3
ECHDC1-209ENST00000454591 VPS41P49754 854 aa13.17□□□□□ -0.3
ECHDC1-209ENST00000454591 MNAT1P51948 309 aa13.17□□□□□ -0.3
ECHDC1-209ENST00000454591 HIRAP54198 1017 aaPredicted RBP13.17□□□□□ -0.3
ECHDC1-209ENST00000454591 RAD23BP54727 409 aa13.17□□□□□ -0.3
ECHDC1-209ENST00000454591 WDR4P57081 412 aaKnown RBP13.17□□□□□ -0.3
ECHDC1-209ENST00000454591 NCALDP61601 193 aa13.17□□□□□ -0.3
ECHDC1-209ENST00000454591 GPS1Q13098 491 aa13.17□□□□□ -0.3
ECHDC1-209ENST00000454591 SEZ6Q53EL9 994 aa13.17□□□□□ -0.3
ECHDC1-209ENST00000454591 NUGGCQ68CJ6 796 aa13.17□□□□□ -0.3
ECHDC1-209ENST00000454591 TXNRD3NBQ6F5E7 133 aa13.17□□□□□ -0.3
ECHDC1-209ENST00000454591 CGB2Q6NT52 195 aa13.17□□□□□ -0.3
ECHDC1-209ENST00000454591 DENND1BQ6P3S1 775 aa13.17□□□□□ -0.3
ECHDC1-209ENST00000454591 ZBTB33Q86T24 672 aa13.17□□□□□ -0.3
ECHDC1-209ENST00000454591 VSIG1Q86XK7 387 aa13.17□□□□□ -0.3
ECHDC1-209ENST00000454591 PPIL6Q8IXY8 311 aa13.17□□□□□ -0.3
ECHDC1-209ENST00000454591 TTC39CQ8N584 583 aa13.17□□□□□ -0.3
ECHDC1-209ENST00000454591 ARFGAP1Q8N6T3 406 aa13.17□□□□□ -0.3
ECHDC1-209ENST00000454591 CCDC63Q8NA47 563 aa13.17□□□□□ -0.3
ECHDC1-209ENST00000454591 SP7Q8TDD2 431 aaPredicted RBP13.17□□□□□ -0.3
ECHDC1-209ENST00000454591 TCHPQ9BT92 498 aa13.17□□□□□ -0.3
ECHDC1-209ENST00000454591 CDT1Q9H211 546 aa13.17□□□□□ -0.3
ECHDC1-209ENST00000454591 KCNK9Q9NPC2 374 aa13.17□□□□□ -0.3
ECHDC1-209ENST00000454591 ABCF3Q9NUQ8 709 aa13.17□□□□□ -0.3
ECHDC1-209ENST00000454591 SIX4Q9UIU6 781 aa13.17□□□□□ -0.3
ECHDC1-209ENST00000454591 LRRD1A4D1F6 860 aa13.16□□□□□ -0.3
ECHDC1-209ENST00000454591 CXCL11O14625 94 aa13.16□□□□□ -0.3
ECHDC1-209ENST00000454591 ARIH2O95376 493 aa13.16□□□□□ -0.3
ECHDC1-209ENST00000454591 MCF2P10911 925 aa13.16□□□□□ -0.3
ECHDC1-209ENST00000454591 KRT3P12035 628 aa13.16□□□□□ -0.3
ECHDC1-209ENST00000454591 KDELR1P24390 212 aa13.16□□□□□ -0.3
ECHDC1-209ENST00000454591 PCK1P35558 622 aa13.16□□□□□ -0.3
ECHDC1-209ENST00000454591 GJC1P36383 396 aa13.16□□□□□ -0.3
ECHDC1-209ENST00000454591 LACTBP83111 547 aaPredicted RBP13.16□□□□□ -0.3
ECHDC1-209ENST00000454591 TNFAIP2Q03169 654 aa13.16□□□□□ -0.3
ECHDC1-209ENST00000454591 MBTD1Q05BQ5 628 aa13.16□□□□□ -0.3
ECHDC1-209ENST00000454591 LRRC14Q15048 493 aa13.16□□□□□ -0.3
ECHDC1-209ENST00000454591 PREPLQ4J6C6 727 aaPredicted RBP13.16□□□□□ -0.3
ECHDC1-209ENST00000454591 ZNF667Q5HYK9 610 aa13.16□□□□□ -0.3
ECHDC1-209ENST00000454591 PRAMEF18Q5VWM3 479 aa13.16□□□□□ -0.3
ECHDC1-209ENST00000454591 DEFB132Q7Z7B7 95 aa13.16□□□□□ -0.3
ECHDC1-209ENST00000454591 FAM228AQ86W67 206 aa13.16□□□□□ -0.3
ECHDC1-209ENST00000454591 XYLT1Q86Y38 959 aa13.16□□□□□ -0.3
ECHDC1-209ENST00000454591 SRRM1Q8IYB3 904 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms