RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 PCDHB5Q9Y5E4 795 aa29.88■■■□□ 2.37
SMARCC1-203ENST00000454240 NOTCH4Q99466 2003 aa29.88■■■□□ 2.37
SMARCC1-203ENST00000454240 XYLBO75191 536 aa29.87■■■□□ 2.37
SMARCC1-203ENST00000454240 LRG1P02750 347 aa29.87■■■□□ 2.37
SMARCC1-203ENST00000454240 CDR1P51861 262 aa29.87■■■□□ 2.37
SMARCC1-203ENST00000454240 MYL5Q02045 173 aa29.87■■■□□ 2.37
SMARCC1-203ENST00000454240 INCA1Q0VD86 236 aa29.87■■■□□ 2.37
SMARCC1-203ENST00000454240 CCDC142Q17RM4 750 aa29.87■■■□□ 2.37
SMARCC1-203ENST00000454240 CDKAL1Q5VV42 579 aa29.87■■■□□ 2.37
SMARCC1-203ENST00000454240 NAT10Q9H0A0 1025 aaKnown RBP29.87■■■□□ 2.37
SMARCC1-203ENST00000454240 DPEP3Q9H4B8 488 aa29.87■■■□□ 2.37
SMARCC1-203ENST00000454240 PIDD1Q9HB75 910 aa29.87■■■□□ 2.37
SMARCC1-203ENST00000454240 YIPF1Q9Y548 306 aa29.87■■■□□ 2.37
SMARCC1-203ENST00000454240 VCANP13611 3396 aa29.87■■■□□ 2.37
SMARCC1-203ENST00000454240 KCNJ18B7U540 433 aa29.86■■■□□ 2.37
SMARCC1-203ENST00000454240 PTPN1P18031 435 aaKnown RBP29.86■■■□□ 2.37
SMARCC1-203ENST00000454240 EEF1GP26641 437 aaKnown RBP29.86■■■□□ 2.37
SMARCC1-203ENST00000454240 TUFMP49411 452 aaKnown RBP29.86■■■□□ 2.37
SMARCC1-203ENST00000454240 TWF1Q12792 350 aa29.86■■■□□ 2.37
SMARCC1-203ENST00000454240 KCNJ12Q14500 433 aa29.86■■■□□ 2.37
SMARCC1-203ENST00000454240 MAPRE1Q15691 268 aaKnown RBP29.86■■■□□ 2.37
SMARCC1-203ENST00000454240 MAN2A1Q16706 1144 aa29.86■■■□□ 2.37
SMARCC1-203ENST00000454240 TCP11X2Q5H9J9 407 aa29.86■■■□□ 2.37
SMARCC1-203ENST00000454240 UNC93AQ86WB7 457 aa29.86■■■□□ 2.37
SMARCC1-203ENST00000454240 EHBP1Q8NDI1 1231 aa29.86■■■□□ 2.37
SMARCC1-203ENST00000454240 MYCBPAPQ8TBZ2 947 aa29.86■■■□□ 2.37
SMARCC1-203ENST00000454240 BPIFA3Q9BQP9 254 aa29.86■■■□□ 2.37
SMARCC1-203ENST00000454240 TUBGCP2Q9BSJ2 902 aa29.86■■■□□ 2.37
SMARCC1-203ENST00000454240 PHF7Q9BWX1 381 aaPredicted RBP29.86■■■□□ 2.37
SMARCC1-203ENST00000454240 WDR6Q9NNW5 1121 aaKnown RBP29.86■■■□□ 2.37
SMARCC1-203ENST00000454240 ABCB6Q9NP58 842 aa29.86■■■□□ 2.37
SMARCC1-203ENST00000454240 FANCLQ9NW38 375 aa29.86■■■□□ 2.37
SMARCC1-203ENST00000454240 ABI2Q9NYB9 513 aaPredicted RBP29.86■■■□□ 2.37
SMARCC1-203ENST00000454240 PRKAG3Q9UGI9 489 aa29.86■■■□□ 2.37
SMARCC1-203ENST00000454240 HAPLN1P10915 354 aaPredicted RBP29.85■■■□□ 2.37
SMARCC1-203ENST00000454240 NDST1P52848 882 aa29.85■■■□□ 2.37
SMARCC1-203ENST00000454240 NCAPHQ15003 741 aa29.85■■■□□ 2.37
SMARCC1-203ENST00000454240 CFAP221Q4G0U5 840 aa29.85■■■□□ 2.37
SMARCC1-203ENST00000454240 B3GALNT2Q8NCR0 500 aa29.85■■■□□ 2.37
SMARCC1-203ENST00000454240 FUBP3Q96I24 572 aaKnown RBP eCLIP29.85■■■□□ 2.37
SMARCC1-203ENST00000454240 FAM124BQ9H5Z6 455 aaPredicted RBP29.85■■■□□ 2.37
SMARCC1-203ENST00000454240 ZSCAN23Q3MJ62 389 aa29.84■■■□□ 2.37
SMARCC1-203ENST00000454240 MGAT5BQ3V5L5 792 aa29.84■■■□□ 2.37
SMARCC1-203ENST00000454240 MIIPQ5JXC2 388 aa29.84■■■□□ 2.37
SMARCC1-203ENST00000454240 C4orf50Q6ZRC1 276 aa29.84■■■□□ 2.37
SMARCC1-203ENST00000454240 CRYBG2Q8N1P7 616 aa29.84■■■□□ 2.37
SMARCC1-203ENST00000454240 TNIP3Q96KP6 325 aa29.84■■■□□ 2.37
SMARCC1-203ENST00000454240 LPIN3Q9BQK8 851 aa29.84■■■□□ 2.37
SMARCC1-203ENST00000454240 CEP72Q9P209 647 aa29.84■■■□□ 2.37
SMARCC1-203ENST00000454240 A0A0C4DFX4 3053 aa29.83■■■□□ 2.37
SMARCC1-203ENST00000454240 SOAT2O75908 522 aa29.83■■■□□ 2.37
SMARCC1-203ENST00000454240 ALDH1A3P47895 512 aa29.83■■■□□ 2.37
SMARCC1-203ENST00000454240 LRMPQ12912 555 aa29.83■■■□□ 2.37
SMARCC1-203ENST00000454240 PLD1Q13393 1074 aa29.83■■■□□ 2.37
SMARCC1-203ENST00000454240 VWA3BQ502W6 1294 aa29.83■■■□□ 2.37
SMARCC1-203ENST00000454240 MDH1BQ5I0G3 518 aa29.83■■■□□ 2.37
SMARCC1-203ENST00000454240 GRASPQ7Z6J2 395 aaPredicted RBP29.83■■■□□ 2.37
SMARCC1-203ENST00000454240 SPATA2LQ8IUW3 424 aaPredicted RBP29.83■■■□□ 2.37
SMARCC1-203ENST00000454240 ADHFE1Q8IWW8 467 aa29.83■■■□□ 2.37
SMARCC1-203ENST00000454240 WHAMMQ8TF30 809 aa29.83■■■□□ 2.37
SMARCC1-203ENST00000454240 MYLPFQ96A32 169 aa29.83■■■□□ 2.37
SMARCC1-203ENST00000454240 PCED1BQ96HM7 432 aa29.83■■■□□ 2.37
SMARCC1-203ENST00000454240 SEPT5Q99719 369 aaPredicted RBP29.83■■■□□ 2.37
SMARCC1-203ENST00000454240 ARID3AQ99856 593 aa29.83■■■□□ 2.37
SMARCC1-203ENST00000454240 DNMT3BQ9UBC3 853 aaKnown RBP29.83■■■□□ 2.37
SMARCC1-203ENST00000454240 HMGXB4Q9UGU5 601 aa29.83■■■□□ 2.37
SMARCC1-203ENST00000454240 GTPBP10A4D1E9 387 aaKnown RBP29.82■■■□□ 2.36
SMARCC1-203ENST00000454240 CILPO75339 1184 aa29.82■■■□□ 2.36
SMARCC1-203ENST00000454240 PRKCSHP14314 528 aaPredicted RBP29.82■■■□□ 2.36
SMARCC1-203ENST00000454240 CYP2F1P24903 491 aa29.82■■■□□ 2.36
SMARCC1-203ENST00000454240 CUL2Q13617 745 aa29.82■■■□□ 2.36
SMARCC1-203ENST00000454240 TTC39CQ8N584 583 aa29.82■■■□□ 2.36
SMARCC1-203ENST00000454240 ADAMTS19Q8TE59 1207 aa29.82■■■□□ 2.36
SMARCC1-203ENST00000454240 NT5C1BQ96P26 610 aa29.82■■■□□ 2.36
SMARCC1-203ENST00000454240 NDST4Q9H3R1 872 aa29.82■■■□□ 2.36
SMARCC1-203ENST00000454240 CISHQ9NSE2 258 aa29.82■■■□□ 2.36
SMARCC1-203ENST00000454240 HCFC1R1Q9NWW0 138 aa29.82■■■□□ 2.36
SMARCC1-203ENST00000454240 CLUHO75153 1309 aa29.81■■■□□ 2.36
SMARCC1-203ENST00000454240 PTPN2P17706 415 aa29.81■■■□□ 2.36
SMARCC1-203ENST00000454240 CD58P19256 250 aa29.81■■■□□ 2.36
SMARCC1-203ENST00000454240 EPHB3P54753 998 aa29.81■■■□□ 2.36
SMARCC1-203ENST00000454240 ZP2Q05996 745 aa29.81■■■□□ 2.36
SMARCC1-203ENST00000454240 ACOT1Q86TX2 421 aa29.81■■■□□ 2.36
SMARCC1-203ENST00000454240 AOPEPQ8N6M6 819 aa29.81■■■□□ 2.36
SMARCC1-203ENST00000454240 ZNF512Q96ME7 567 aaPredicted RBP29.81■■■□□ 2.36
SMARCC1-203ENST00000454240 TWNKQ96RR1 684 aa29.81■■■□□ 2.36
SMARCC1-203ENST00000454240 INTS2Q9H0H0 1204 aaKnown RBP29.81■■■□□ 2.36
SMARCC1-203ENST00000454240 HSD3B7Q9H2F3 369 aa29.81■■■□□ 2.36
SMARCC1-203ENST00000454240 ATF6P18850 670 aa29.8■■■□□ 2.36
SMARCC1-203ENST00000454240 TBXAS1P24557 533 aaPredicted RBP29.8■■■□□ 2.36
SMARCC1-203ENST00000454240 MAGEA11P43364 429 aa29.8■■■□□ 2.36
SMARCC1-203ENST00000454240 ZNF165P49910 485 aa29.8■■■□□ 2.36
SMARCC1-203ENST00000454240 NTHL1P78549 312 aa29.8■■■□□ 2.36
SMARCC1-203ENST00000454240 CYP27A1Q02318 531 aa29.8■■■□□ 2.36
SMARCC1-203ENST00000454240 GBP6Q6ZN66 633 aa29.8■■■□□ 2.36
SMARCC1-203ENST00000454240 ELMOD1Q8N336 334 aa29.8■■■□□ 2.36
SMARCC1-203ENST00000454240 CRACR2AQ9BSW2 395 aa29.8■■■□□ 2.36
SMARCC1-203ENST00000454240 NT5C1AQ9BXI3 368 aa29.8■■■□□ 2.36
SMARCC1-203ENST00000454240 B3GNT5Q9BYG0 378 aa29.8■■■□□ 2.36
SMARCC1-203ENST00000454240 GCNT4Q9P109 453 aa29.8■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms