RNA–Protein interactions for RNA: ENST00000453963.5

SEC16A-207, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 4,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-207ENST00000453963 DEFB129Q9H1M3 183 aa12.55□□□□□ -0.4
SEC16A-207ENST00000453963 RUBCNLQ9H714 662 aa12.55□□□□□ -0.4
SEC16A-207ENST00000453963 ANKEF1Q9NU02 776 aa12.55□□□□□ -0.4
SEC16A-207ENST00000453963 CHORDC1Q9UHD1 332 aaPredicted RBP12.55□□□□□ -0.4
SEC16A-207ENST00000453963 XPO1O14980 1071 aaKnown RBP12.54□□□□□ -0.4
SEC16A-207ENST00000453963 TRAPPC3O43617 180 aa12.54□□□□□ -0.4
SEC16A-207ENST00000453963 TBC1D4O60343 1298 aa12.54□□□□□ -0.4
SEC16A-207ENST00000453963 GLRA3O75311 464 aa12.54□□□□□ -0.4
SEC16A-207ENST00000453963 DPEP1P16444 411 aa12.54□□□□□ -0.4
SEC16A-207ENST00000453963 LBRQ14739 615 aaKnown RBP12.54□□□□□ -0.4
SEC16A-207ENST00000453963 MROH9Q5TGP6 573 aa12.54□□□□□ -0.4
SEC16A-207ENST00000453963 GPAT2Q6NUI2 795 aa12.54□□□□□ -0.4
SEC16A-207ENST00000453963 FAM71DQ8N9W8 422 aa12.54□□□□□ -0.4
SEC16A-207ENST00000453963 ZNF507Q8TCN5 953 aa12.54□□□□□ -0.4
SEC16A-207ENST00000453963 ATG4AQ8WYN0 398 aa12.54□□□□□ -0.4
SEC16A-207ENST00000453963 JADE3Q92613 823 aa12.54□□□□□ -0.4
SEC16A-207ENST00000453963 AGAP3Q96P47 875 aa12.54□□□□□ -0.4
SEC16A-207ENST00000453963 NIF3L1Q9GZT8 377 aa12.54□□□□□ -0.4
SEC16A-207ENST00000453963 PALMDQ9NP74 551 aa12.54□□□□□ -0.4
SEC16A-207ENST00000453963 TM9SF1O15321 606 aa12.54□□□□□ -0.4
SEC16A-207ENST00000453963 HNRNPRO43390 633 aaKnown RBP12.54□□□□□ -0.4
SEC16A-207ENST00000453963 MOCS2O96007 188 aaPredicted RBP12.54□□□□□ -0.4
SEC16A-207ENST00000453963 THRAP10827 490 aa12.54□□□□□ -0.4
SEC16A-207ENST00000453963 MUTP22033 750 aa12.54□□□□□ -0.4
SEC16A-207ENST00000453963 RPS12P25398 132 aaKnown RBP12.54□□□□□ -0.4
SEC16A-207ENST00000453963 BTKQ06187 659 aa12.54□□□□□ -0.4
SEC16A-207ENST00000453963 MCL1Q07820 350 aa12.54□□□□□ -0.4
SEC16A-207ENST00000453963 KCNA1Q09470 495 aa12.54□□□□□ -0.4
SEC16A-207ENST00000453963 PDK1Q15118 436 aa12.54□□□□□ -0.4
SEC16A-207ENST00000453963 CCNG2Q16589 344 aa12.54□□□□□ -0.4
SEC16A-207ENST00000453963 BOLA3Q53S33 107 aa12.54□□□□□ -0.4
SEC16A-207ENST00000453963 ILDR1Q86SU0 546 aaPredicted RBP12.54□□□□□ -0.4
SEC16A-207ENST00000453963 MTDHQ86UE4 582 aaKnown RBP12.54□□□□□ -0.4
SEC16A-207ENST00000453963 PTPRN2Q92932 1015 aa12.54□□□□□ -0.4
SEC16A-207ENST00000453963 SH2D3AQ9BRG2 576 aa12.54□□□□□ -0.4
SEC16A-207ENST00000453963 TRIM45Q9H8W5 580 aaPredicted RBP12.54□□□□□ -0.4
SEC16A-207ENST00000453963 TECPR2O15040 1411 aa12.54□□□□□ -0.4
SEC16A-207ENST00000453963 UBA6A0AVT1 1052 aaPredicted RBP12.54□□□□□ -0.4
SEC16A-207ENST00000453963 RSPH10B2B2RC85 870 aa12.54□□□□□ -0.4
SEC16A-207ENST00000453963 DPYSL4O14531 572 aa12.54□□□□□ -0.4
SEC16A-207ENST00000453963 RIPK2O43353 540 aa12.54□□□□□ -0.4
SEC16A-207ENST00000453963 MYO1DO94832 1006 aa12.54□□□□□ -0.4
SEC16A-207ENST00000453963 SNUPNO95149 360 aaKnown RBP12.54□□□□□ -0.4
SEC16A-207ENST00000453963 RSPH10BP0C881 870 aa12.54□□□□□ -0.4
SEC16A-207ENST00000453963 ZCCHC18P0CG32 403 aa12.54□□□□□ -0.4
SEC16A-207ENST00000453963 FOXD4Q12950 439 aaPredicted RBP12.54□□□□□ -0.4
SEC16A-207ENST00000453963 NAIF1Q69YI7 327 aaPredicted RBP12.54□□□□□ -0.4
SEC16A-207ENST00000453963 INTS5Q6P9B9 1019 aaKnown RBP12.54□□□□□ -0.4
SEC16A-207ENST00000453963 TMCO5AQ8N6Q1 288 aa12.54□□□□□ -0.4
SEC16A-207ENST00000453963 TMEM39BQ9GZU3 492 aa12.54□□□□□ -0.4
SEC16A-207ENST00000453963 CAAP1Q9H8G2 361 aa12.54□□□□□ -0.4
SEC16A-207ENST00000453963 COG4Q9H9E3 785 aa12.54□□□□□ -0.4
SEC16A-207ENST00000453963 C17orf75Q9HAS0 396 aa12.54□□□□□ -0.4
SEC16A-207ENST00000453963 OSGEPQ9NPF4 335 aa12.54□□□□□ -0.4
SEC16A-207ENST00000453963 HACL1Q9UJ83 578 aa12.54□□□□□ -0.4
SEC16A-207ENST00000453963 LRCH1Q9Y2L9 728 aa12.54□□□□□ -0.4
SEC16A-207ENST00000453963 AP4S1Q9Y587 144 aa12.54□□□□□ -0.4
SEC16A-207ENST00000453963 IGSF9BQ9UPX0 1349 aa12.54□□□□□ -0.4
SEC16A-207ENST00000453963 FAM237AA0A1B0GTK4 181 aa12.54□□□□□ -0.4
SEC16A-207ENST00000453963 GRIN3BO60391 1043 aa12.54□□□□□ -0.4
SEC16A-207ENST00000453963 SYF2O95926 243 aaKnown RBP12.54□□□□□ -0.4
SEC16A-207ENST00000453963 SNAPC2Q13487 334 aa12.54□□□□□ -0.4
SEC16A-207ENST00000453963 CCNJLQ8IV13 435 aa12.54□□□□□ -0.4
SEC16A-207ENST00000453963 MXRA8Q9BRK3 442 aa12.54□□□□□ -0.4
SEC16A-207ENST00000453963 C10orf88Q9H8K7 445 aa12.54□□□□□ -0.4
SEC16A-207ENST00000453963 PLEKHA5Q9HAU0 1116 aa12.54□□□□□ -0.4
SEC16A-207ENST00000453963 TAGLN3Q9UI15 199 aa12.54□□□□□ -0.4
SEC16A-207ENST00000453963 AGAP1Q9UPQ3 857 aa12.54□□□□□ -0.4
SEC16A-207ENST00000453963 SALL1Q9NSC2 1324 aa12.54□□□□□ -0.4
SEC16A-207ENST00000453963 FRMPD1Q5SYB0 1578 aa12.54□□□□□ -0.4
SEC16A-207ENST00000453963 FAM153BP0C7A2 387 aa12.53□□□□□ -0.4
SEC16A-207ENST00000453963 LCP1P13796 627 aa12.53□□□□□ -0.4
SEC16A-207ENST00000453963 GPD1P21695 349 aa12.53□□□□□ -0.4
SEC16A-207ENST00000453963 TNFRSF8P28908 595 aa12.53□□□□□ -0.4
SEC16A-207ENST00000453963 KBTBD12Q3ZCT8 623 aa12.53□□□□□ -0.4
SEC16A-207ENST00000453963 FAM153CQ494X1 144 aa12.53□□□□□ -0.4
SEC16A-207ENST00000453963 PRAMEF18Q5VWM3 479 aa12.53□□□□□ -0.4
SEC16A-207ENST00000453963 PLD3Q8IV08 490 aa12.53□□□□□ -0.4
SEC16A-207ENST00000453963 CD302Q8IX05 232 aa12.53□□□□□ -0.4
SEC16A-207ENST00000453963 USP32Q8NFA0 1604 aa12.53□□□□□ -0.4
SEC16A-207ENST00000453963 RMDN2Q96LZ7 410 aa12.53□□□□□ -0.4
SEC16A-207ENST00000453963 PPP1R2P1Q96PQ5 205 aa12.53□□□□□ -0.4
SEC16A-207ENST00000453963 MED15Q96RN5 788 aa12.53□□□□□ -0.4
SEC16A-207ENST00000453963 ILKAPQ9H0C8 392 aaPredicted RBP12.53□□□□□ -0.4
SEC16A-207ENST00000453963 MYOZ2Q9NPC6 264 aa12.53□□□□□ -0.4
SEC16A-207ENST00000453963 FAM153AQ9UHL3 310 aa12.53□□□□□ -0.4
SEC16A-207ENST00000453963 ZSCAN5CA6NGD5 496 aaPredicted RBP12.53□□□□□ -0.4
SEC16A-207ENST00000453963 TRPC5OSA6NMA1 111 aa12.53□□□□□ -0.4
SEC16A-207ENST00000453963 M0R3G1 203 aa12.53□□□□□ -0.4
SEC16A-207ENST00000453963 GTF2H1P32780 548 aa12.53□□□□□ -0.4
SEC16A-207ENST00000453963 S100A5P33763 92 aa12.53□□□□□ -0.4
SEC16A-207ENST00000453963 PMS1P54277 932 aaKnown RBP12.53□□□□□ -0.4
SEC16A-207ENST00000453963 ZNF235Q14590 738 aa12.53□□□□□ -0.4
SEC16A-207ENST00000453963 EPC2Q52LR7 807 aa12.53□□□□□ -0.4
SEC16A-207ENST00000453963 AGBL3Q8NEM8 1001 aa12.53□□□□□ -0.4
SEC16A-207ENST00000453963 PRPF18Q99633 342 aaKnown RBP12.53□□□□□ -0.4
SEC16A-207ENST00000453963 ARHGEF38Q9NXL2 777 aa12.53□□□□□ -0.4
SEC16A-207ENST00000453963 ZC3H11AO75152 810 aaKnown RBP eCLIP12.53□□□□□ -0.44e-6■□□□□ 9.6
SEC16A-207ENST00000453963 SGPL1O95470 568 aa12.53□□□□□ -0.4
SEC16A-207ENST00000453963 TCN1P20061 433 aaPredicted RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms