RNA–Protein interactions for RNA: ENST00000452979.5

HERC3-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 3

Gene HERC3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-207ENST00000452979 BECN1Q14457 450 aa12.59□□□□□ -0.39
HERC3-207ENST00000452979 TAF12Q16514 161 aa12.59□□□□□ -0.39
HERC3-207ENST00000452979 STPG1Q5TH74 334 aa12.59□□□□□ -0.39
HERC3-207ENST00000452979 SLFN12LQ6IEE8 588 aa12.59□□□□□ -0.39
HERC3-207ENST00000452979 DCP1BQ8IZD4 617 aaKnown RBP12.59□□□□□ -0.39
HERC3-207ENST00000452979 MAB21L3Q8N8X9 362 aa12.59□□□□□ -0.39
HERC3-207ENST00000452979 INTS4Q96HW7 963 aaKnown RBP12.59□□□□□ -0.39
HERC3-207ENST00000452979 PYM1Q9BRP8 204 aaKnown RBP12.59□□□□□ -0.39
HERC3-207ENST00000452979 LSM14BQ9BX40 385 aaKnown RBP12.59□□□□□ -0.39
HERC3-207ENST00000452979 ST6GALNAC4Q9H4F1 302 aa12.59□□□□□ -0.39
HERC3-207ENST00000452979 EBF3Q9H4W6 596 aa12.59□□□□□ -0.39
HERC3-207ENST00000452979 BLOC1S4Q9NUP1 217 aa12.59□□□□□ -0.39
HERC3-207ENST00000452979 DPP3Q9NY33 737 aa12.59□□□□□ -0.39
HERC3-207ENST00000452979 MYO16Q9Y6X6 1858 aa12.59□□□□□ -0.39
HERC3-207ENST00000452979 KPNA7A9QM74 516 aa12.58□□□□□ -0.4
HERC3-207ENST00000452979 FAM13AO94988 1023 aa12.58□□□□□ -0.4
HERC3-207ENST00000452979 EGFP01133 1207 aa12.58□□□□□ -0.4
HERC3-207ENST00000452979 CCDC192P0DO97 292 aa12.58□□□□□ -0.4
HERC3-207ENST00000452979 GJB2P29033 226 aa12.58□□□□□ -0.4
HERC3-207ENST00000452979 UBA7P41226 1012 aa12.58□□□□□ -0.4
HERC3-207ENST00000452979 BFSP1Q12934 665 aa12.58□□□□□ -0.4
HERC3-207ENST00000452979 PDGFRLQ15198 375 aa12.58□□□□□ -0.4
HERC3-207ENST00000452979 CCDC6Q16204 474 aa12.58□□□□□ -0.4
HERC3-207ENST00000452979 FBXO43Q4G163 708 aa12.58□□□□□ -0.4
HERC3-207ENST00000452979 WSCD1Q658N2 575 aa12.58□□□□□ -0.4
HERC3-207ENST00000452979 TRIM68Q6AZZ1 485 aa12.58□□□□□ -0.4
HERC3-207ENST00000452979 ADALQ6DHV7 355 aa12.58□□□□□ -0.4
HERC3-207ENST00000452979 MCTP1Q6DN14 999 aa12.58□□□□□ -0.4
HERC3-207ENST00000452979 CRELD2Q6UXH1 353 aaPredicted RBP12.58□□□□□ -0.4
HERC3-207ENST00000452979 SYT13Q7L8C5 426 aa12.58□□□□□ -0.4
HERC3-207ENST00000452979 GPBP1Q86WP2 473 aa12.58□□□□□ -0.4
HERC3-207ENST00000452979 NT5DC4Q86YG4 428 aa12.58□□□□□ -0.4
HERC3-207ENST00000452979 SPRYD3Q8NCJ5 442 aa12.58□□□□□ -0.4
HERC3-207ENST00000452979 RIN3Q8TB24 985 aa12.58□□□□□ -0.4
HERC3-207ENST00000452979 CALML4Q96GE6 196 aa12.58□□□□□ -0.4
HERC3-207ENST00000452979 DUSP15Q9H1R2 295 aaPredicted RBP12.58□□□□□ -0.4
HERC3-207ENST00000452979 VPS45Q9NRW7 570 aa12.58□□□□□ -0.4
HERC3-207ENST00000452979 EBF1Q9UH73 591 aa12.58□□□□□ -0.4
HERC3-207ENST00000452979 AGO2Q9UKV8 859 aaKnown RBP12.58□□□□□ -0.4
HERC3-207ENST00000452979 KIF3AQ9Y496 699 aa12.58□□□□□ -0.4
HERC3-207ENST00000452979 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.58□□□□□ -0.4
HERC3-207ENST00000452979 PCDHB5Q9Y5E4 795 aa12.58□□□□□ -0.4
HERC3-207ENST00000452979 ATG2BQ96BY7 2078 aa12.58□□□□□ -0.4
HERC3-207ENST00000452979 CHD8Q9HCK8 2581 aa12.58□□□□□ -0.4
HERC3-207ENST00000452979 USP24Q9UPU5 2620 aa12.57□□□□□ -0.4
HERC3-207ENST00000452979 RNF40O75150 1001 aa12.57□□□□□ -0.4
HERC3-207ENST00000452979 NMT1P30419 496 aaKnown RBP12.57□□□□□ -0.4
HERC3-207ENST00000452979 GJA4P35212 333 aa12.57□□□□□ -0.4
HERC3-207ENST00000452979 CDR1P51861 262 aa12.57□□□□□ -0.4
HERC3-207ENST00000452979 NFE2Q16621 373 aaPredicted RBP12.57□□□□□ -0.4
HERC3-207ENST00000452979 SV2CQ496J9 727 aa12.57□□□□□ -0.4
HERC3-207ENST00000452979 PLK5Q496M5 336 aa12.57□□□□□ -0.4
HERC3-207ENST00000452979 ZC2HC1CQ53FD0 456 aaPredicted RBP12.57□□□□□ -0.4
HERC3-207ENST00000452979 TXNDC8Q6A555 127 aa12.57□□□□□ -0.4
HERC3-207ENST00000452979 CC2D1AQ6P1N0 951 aaPredicted RBP12.57□□□□□ -0.4
HERC3-207ENST00000452979 LEO1Q8WVC0 666 aaPredicted RBP12.57□□□□□ -0.4
HERC3-207ENST00000452979 MRPS31Q92665 395 aaKnown RBP12.57□□□□□ -0.4
HERC3-207ENST00000452979 RAD54LQ92698 747 aa12.57□□□□□ -0.4
HERC3-207ENST00000452979 EXOC4Q96A65 974 aa12.57□□□□□ -0.4
HERC3-207ENST00000452979 TRMT2BQ96GJ1 504 aaKnown RBP12.57□□□□□ -0.4
HERC3-207ENST00000452979 MYRFLQ96LU7 910 aa12.57□□□□□ -0.4
HERC3-207ENST00000452979 P2RY13Q9BPV8 354 aa12.57□□□□□ -0.4
HERC3-207ENST00000452979 ABCB6Q9NP58 842 aa12.57□□□□□ -0.4
HERC3-207ENST00000452979 TMLHEQ9NVH6 421 aa12.57□□□□□ -0.4
HERC3-207ENST00000452979 ABI2Q9NYB9 513 aaPredicted RBP12.57□□□□□ -0.4
HERC3-207ENST00000452979 SMC3Q9UQE7 1217 aa12.57□□□□□ -0.4
HERC3-207ENST00000452979 ANAPC1Q9H1A4 1944 aa12.56□□□□□ -0.4
HERC3-207ENST00000452979 TISP43B9A030 160 aa12.56□□□□□ -0.4
HERC3-207ENST00000452979 NOL4O94818 638 aa12.56□□□□□ -0.4
HERC3-207ENST00000452979 KCNK5O95279 499 aa12.56□□□□□ -0.4
HERC3-207ENST00000452979 CSH1P0DML2 217 aa12.56□□□□□ -0.4
HERC3-207ENST00000452979 CSH2P0DML3 217 aa12.56□□□□□ -0.4
HERC3-207ENST00000452979 ARSAP15289 507 aa12.56□□□□□ -0.4
HERC3-207ENST00000452979 MPLP40238 635 aa12.56□□□□□ -0.4
HERC3-207ENST00000452979 PNPLA4P41247 253 aa12.56□□□□□ -0.4
HERC3-207ENST00000452979 DHX8Q14562 1220 aaKnown RBP12.56□□□□□ -0.4
HERC3-207ENST00000452979 MCM6Q14566 821 aa12.56□□□□□ -0.4
HERC3-207ENST00000452979 ZNF720Q7Z2F6 126 aa12.56□□□□□ -0.4
HERC3-207ENST00000452979 EFCAB13Q8IY85 973 aa12.56□□□□□ -0.4
HERC3-207ENST00000452979 EZH1Q92800 747 aaPredicted RBP12.56□□□□□ -0.4
HERC3-207ENST00000452979 PKMYT1Q99640 499 aa12.56□□□□□ -0.4
HERC3-207ENST00000452979 ACBD6Q9BR61 282 aa12.56□□□□□ -0.4
HERC3-207ENST00000452979 STRA6Q9BX79 667 aa12.56□□□□□ -0.4
HERC3-207ENST00000452979 ECT2Q9H8V3 914 aa12.56□□□□□ -0.4
HERC3-207ENST00000452979 POLR3BQ9NW08 1133 aaPredicted RBP12.56□□□□□ -0.4
HERC3-207ENST00000452979 UXTQ9UBK9 157 aaPredicted RBP12.56□□□□□ -0.4
HERC3-207ENST00000452979 CFAP47Q6ZTR5 3102 aa12.56□□□□□ -0.4
HERC3-207ENST00000452979 LAMA1P25391 3075 aa12.56□□□□□ -0.4
HERC3-207ENST00000452979 PRPF40AO75400 957 aaKnown RBP12.55□□□□□ -0.4
HERC3-207ENST00000452979 RHOBTB1O94844 696 aa12.55□□□□□ -0.4
HERC3-207ENST00000452979 IL18RAPO95256 599 aa12.55□□□□□ -0.4
HERC3-207ENST00000452979 KRT18P05783 430 aaKnown RBP12.55□□□□□ -0.4
HERC3-207ENST00000452979 ADSSP30520 456 aa12.55□□□□□ -0.4
HERC3-207ENST00000452979 DDIT3P35638 169 aa12.55□□□□□ -0.4
HERC3-207ENST00000452979 LONP1P36776 959 aaKnown RBP12.55□□□□□ -0.4
HERC3-207ENST00000452979 GPR15P49685 360 aa12.55□□□□□ -0.4
HERC3-207ENST00000452979 RPL10AP62906 217 aaKnown RBP12.55□□□□□ -0.4
HERC3-207ENST00000452979 TSPY1Q01534 308 aa12.55□□□□□ -0.4
HERC3-207ENST00000452979 FAM160A1Q05DH4 1040 aa12.55□□□□□ -0.4
HERC3-207ENST00000452979 MTF1Q14872 753 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms