RNA–Protein interactions for RNA: ENST00000450000.5

CPSF7-208, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-208ENST00000450000 RPS9P46781 194 aaKnown RBP23.55■■□□□ 1.36
CPSF7-208ENST00000450000 ATRIPQ8WXE1 791 aa23.55■■□□□ 1.36
CPSF7-208ENST00000450000 MRPS31Q92665 395 aaKnown RBP23.55■■□□□ 1.36
CPSF7-208ENST00000450000 CLDN23Q96B33 292 aa23.55■■□□□ 1.36
CPSF7-208ENST00000450000 CCDC127Q96BQ5 260 aa23.55■■□□□ 1.36
CPSF7-208ENST00000450000 C8orf33Q9H7E9 229 aaPredicted RBP23.55■■□□□ 1.36
CPSF7-208ENST00000450000 OBP2AQ9NY56 170 aa23.55■■□□□ 1.36
CPSF7-208ENST00000450000 CGNQ9P2M7 1197 aaKnown RBP23.55■■□□□ 1.36
CPSF7-208ENST00000450000 UXTQ9UBK9 157 aaPredicted RBP23.55■■□□□ 1.36
CPSF7-208ENST00000450000 GTF3C4Q9UKN8 822 aa23.55■■□□□ 1.36
CPSF7-208ENST00000450000 KINO60870 393 aaKnown RBP23.54■■□□□ 1.36
CPSF7-208ENST00000450000 CASP1P29466 404 aa23.54■■□□□ 1.36
CPSF7-208ENST00000450000 TRPC3Q13507 836 aa23.54■■□□□ 1.36
CPSF7-208ENST00000450000 C4orf50Q6ZRC1 276 aa23.54■■□□□ 1.36
CPSF7-208ENST00000450000 EPM2AIP1Q7L775 607 aaPredicted RBP23.54■■□□□ 1.36
CPSF7-208ENST00000450000 OR5B17Q8NGF7 314 aa23.54■■□□□ 1.36
CPSF7-208ENST00000450000 GOLGA5Q8TBA6 731 aa23.54■■□□□ 1.36
CPSF7-208ENST00000450000 BPIFB1Q8TDL5 484 aa23.54■■□□□ 1.36
CPSF7-208ENST00000450000 LEO1Q8WVC0 666 aaPredicted RBP23.54■■□□□ 1.36
CPSF7-208ENST00000450000 SCFD1Q8WVM8 642 aa23.54■■□□□ 1.36
CPSF7-208ENST00000450000 FAM84AQ96KN4 292 aa23.54■■□□□ 1.36
CPSF7-208ENST00000450000 ABCB6Q9NP58 842 aa23.54■■□□□ 1.36
CPSF7-208ENST00000450000 EXOC1Q9NV70 894 aa23.54■■□□□ 1.36
CPSF7-208ENST00000450000 TMLHEQ9NVH6 421 aa23.54■■□□□ 1.36
CPSF7-208ENST00000450000 SIX4Q9UIU6 781 aa23.54■■□□□ 1.36
CPSF7-208ENST00000450000 RCOR1Q9UKL0 485 aa23.54■■□□□ 1.36
CPSF7-208ENST00000450000 EXOC3O60645 756 aa23.53■■□□□ 1.36
CPSF7-208ENST00000450000 PHACTR2O75167 634 aa23.53■■□□□ 1.36
CPSF7-208ENST00000450000 CCNE1P24864 410 aa23.53■■□□□ 1.36
CPSF7-208ENST00000450000 DDX6P26196 483 aaKnown RBP eCLIP23.53■■□□□ 1.36
CPSF7-208ENST00000450000 PLCB2Q00722 1185 aa23.53■■□□□ 1.36
CPSF7-208ENST00000450000 FCHO2Q0JRZ9 810 aa23.53■■□□□ 1.36
CPSF7-208ENST00000450000 CUL4BQ13620 913 aa23.53■■□□□ 1.36
CPSF7-208ENST00000450000 PKP1Q13835 747 aa23.53■■□□□ 1.36
CPSF7-208ENST00000450000 MAPRE1Q15691 268 aaKnown RBP23.53■■□□□ 1.36
CPSF7-208ENST00000450000 DDR2Q16832 855 aa23.53■■□□□ 1.36
CPSF7-208ENST00000450000 ZNF528Q3MIS6 628 aa23.53■■□□□ 1.36
CPSF7-208ENST00000450000 SCN4BQ8IWT1 228 aa23.53■■□□□ 1.36
CPSF7-208ENST00000450000 CELF5Q8N6W0 485 aaKnown RBP23.53■■□□□ 1.36
CPSF7-208ENST00000450000 SPATA32Q96LK8 384 aa23.53■■□□□ 1.36
CPSF7-208ENST00000450000 SNX25Q9H3E2 840 aa23.53■■□□□ 1.36
CPSF7-208ENST00000450000 LMAN1LQ9HAT1 526 aa23.53■■□□□ 1.36
CPSF7-208ENST00000450000 SERTAD1Q9UHV2 236 aa23.53■■□□□ 1.36
CPSF7-208ENST00000450000 SLC38A8A6NNN8 435 aa23.52■■□□□ 1.36
CPSF7-208ENST00000450000 SLFN14P0C7P3 912 aa23.52■■□□□ 1.36
CPSF7-208ENST00000450000 CYP2F1P24903 491 aa23.52■■□□□ 1.36
CPSF7-208ENST00000450000 HOXD13P35453 343 aa23.52■■□□□ 1.36
CPSF7-208ENST00000450000 TNNC1P63316 161 aa23.52■■□□□ 1.36
CPSF7-208ENST00000450000 KRT85P78386 507 aa23.52■■□□□ 1.36
CPSF7-208ENST00000450000 LRRC32Q14392 662 aa23.52■■□□□ 1.36
CPSF7-208ENST00000450000 KNOP1Q1ED39 458 aaKnown RBP23.52■■□□□ 1.36
CPSF7-208ENST00000450000 SOWAHAQ2M3V2 549 aa23.52■■□□□ 1.36
CPSF7-208ENST00000450000 TRAPPC11Q7Z392 1133 aa23.52■■□□□ 1.36
CPSF7-208ENST00000450000 MAB21L3Q8N8X9 362 aa23.52■■□□□ 1.36
CPSF7-208ENST00000450000 CCDC47Q96A33 483 aaKnown RBP23.52■■□□□ 1.36
CPSF7-208ENST00000450000 CGRRF1Q99675 332 aa23.52■■□□□ 1.36
CPSF7-208ENST00000450000 IER2Q9BTL4 223 aa23.52■■□□□ 1.36
CPSF7-208ENST00000450000 MAGEC2Q9UBF1 373 aaPredicted RBP23.52■■□□□ 1.36
CPSF7-208ENST00000450000 CDH9Q9ULB4 789 aa23.52■■□□□ 1.36
CPSF7-208ENST00000450000 ATP6V1DQ9Y5K8 247 aa23.52■■□□□ 1.36
CPSF7-208ENST00000450000 GTF3C3Q9Y5Q9 886 aa23.52■■□□□ 1.36
CPSF7-208ENST00000450000 SCN1AP35498 2009 aa23.52■■□□□ 1.36
CPSF7-208ENST00000450000 TGFB1I1O43294 461 aa23.51■■□□□ 1.35
CPSF7-208ENST00000450000 GPR15P49685 360 aa23.51■■□□□ 1.35
CPSF7-208ENST00000450000 MLLT6P55198 1093 aaPredicted RBP23.51■■□□□ 1.35
CPSF7-208ENST00000450000 NLRP12P59046 1061 aa23.51■■□□□ 1.35
CPSF7-208ENST00000450000 CYP24A1Q07973 514 aa23.51■■□□□ 1.35
CPSF7-208ENST00000450000 PSMD6Q15008 389 aa23.51■■□□□ 1.35
CPSF7-208ENST00000450000 SDHAF4Q5VUM1 108 aa23.51■■□□□ 1.35
CPSF7-208ENST00000450000 CC2D1AQ6P1N0 951 aaPredicted RBP23.51■■□□□ 1.35
CPSF7-208ENST00000450000 OSTM1Q86WC4 334 aa23.51■■□□□ 1.35
CPSF7-208ENST00000450000 CMTM8Q8IZV2 173 aa23.51■■□□□ 1.35
CPSF7-208ENST00000450000 FSIP1Q8NA03 581 aa23.51■■□□□ 1.35
CPSF7-208ENST00000450000 TTC8Q8TAM2 541 aa23.51■■□□□ 1.35
CPSF7-208ENST00000450000 RSPRY1Q96DX4 576 aa23.51■■□□□ 1.35
CPSF7-208ENST00000450000 FUBP3Q96I24 572 aaKnown RBP eCLIP23.51■■□□□ 1.35
CPSF7-208ENST00000450000 SYT15Q9BQS2 421 aa23.51■■□□□ 1.35
CPSF7-208ENST00000450000 SLC46A2Q9BY10 475 aa23.51■■□□□ 1.35
CPSF7-208ENST00000450000 IL21Q9HBE4 155 aa23.51■■□□□ 1.35
CPSF7-208ENST00000450000 USP25Q9UHP3 1055 aa23.51■■□□□ 1.35
CPSF7-208ENST00000450000 ZFHX2Q9C0A1 2572 aaPredicted RBP23.5■■□□□ 1.35
CPSF7-208ENST00000450000 ANK1P16157 1881 aa23.5■■□□□ 1.35
CPSF7-208ENST00000450000 GABRDO14764 452 aa23.5■■□□□ 1.35
CPSF7-208ENST00000450000 PDGFRBP09619 1106 aa23.5■■□□□ 1.35
CPSF7-208ENST00000450000 ANXA13P27216 316 aa23.5■■□□□ 1.35
CPSF7-208ENST00000450000 WEE1P30291 646 aa23.5■■□□□ 1.35
CPSF7-208ENST00000450000 GRAMD1CQ8IYS0 662 aa23.5■■□□□ 1.35
CPSF7-208ENST00000450000 CXorf38Q8TB03 319 aa23.5■■□□□ 1.35
CPSF7-208ENST00000450000 ZFYVE19Q96K21 471 aa23.5■■□□□ 1.35
CPSF7-208ENST00000450000 MKNK1Q9BUB5 465 aa23.5■■□□□ 1.35
CPSF7-208ENST00000450000 SMG9Q9H0W8 520 aaKnown RBP23.5■■□□□ 1.35
CPSF7-208ENST00000450000 TRPC7Q9HCX4 862 aa23.5■■□□□ 1.35
CPSF7-208ENST00000450000 PTPRJQ12913 1337 aa23.5■■□□□ 1.35
CPSF7-208ENST00000450000 MYBPHLA2RUH7 354 aa23.49■■□□□ 1.35
CPSF7-208ENST00000450000 GRIK1P39086 918 aa23.49■■□□□ 1.35
CPSF7-208ENST00000450000 PSMC1P62191 440 aaKnown RBP23.49■■□□□ 1.35
CPSF7-208ENST00000450000 CYP27A1Q02318 531 aa23.49■■□□□ 1.35
CPSF7-208ENST00000450000 MTAPQ13126 283 aa23.49■■□□□ 1.35
CPSF7-208ENST00000450000 PSMD2Q13200 908 aa23.49■■□□□ 1.35
CPSF7-208ENST00000450000 BIRC3Q13489 604 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms