RNA–Protein interactions for RNA: ENST00000449339.1

AP000253.1-201, humanhuman

TSL 3 BASIC

Gene AP000253.1, Length 2,233 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000253.1-201ENST00000449339 RBP5P82980 135 aa17.02■□□□□ 0.32
AP000253.1-201ENST00000449339 GDF6Q6KF10 455 aaPredicted RBP17.02■□□□□ 0.32
AP000253.1-201ENST00000449339 ERICH1Q86X53 443 aa17.02■□□□□ 0.32
AP000253.1-201ENST00000449339 KATNAL2Q8IYT4 538 aa17.02■□□□□ 0.32
AP000253.1-201ENST00000449339 SLC4A11Q8NBS3 891 aa17.02■□□□□ 0.32
AP000253.1-201ENST00000449339 SLCO2A1Q92959 643 aa17.02■□□□□ 0.32
AP000253.1-201ENST00000449339 MCEEQ96PE7 176 aa17.02■□□□□ 0.32
AP000253.1-201ENST00000449339 PARP2Q9UGN5 583 aa17.02■□□□□ 0.32
AP000253.1-201ENST00000449339 ALDH1A1P00352 501 aa17.02■□□□□ 0.32
AP000253.1-201ENST00000449339 MYZAPP0CAP1 466 aa17.02■□□□□ 0.32
AP000253.1-201ENST00000449339 RALAP11233 206 aa17.02■□□□□ 0.32
AP000253.1-201ENST00000449339 GNAT1P11488 350 aa17.02■□□□□ 0.32
AP000253.1-201ENST00000449339 CRYBB1P53674 252 aaPredicted RBP17.02■□□□□ 0.32
AP000253.1-201ENST00000449339 ZNF844Q08AG5 666 aa17.02■□□□□ 0.32
AP000253.1-201ENST00000449339 PPP1R7Q15435 360 aa17.02■□□□□ 0.32
AP000253.1-201ENST00000449339 DNAJC21Q5F1R6 531 aaKnown RBP17.02■□□□□ 0.32
AP000253.1-201ENST00000449339 UBXN11Q5T124 520 aa17.02■□□□□ 0.32
AP000253.1-201ENST00000449339 DCUN1D2Q6PH85 259 aa17.02■□□□□ 0.32
AP000253.1-201ENST00000449339 ATG4AQ8WYN0 398 aa17.02■□□□□ 0.32
AP000253.1-201ENST00000449339 ATP6V1G3Q96LB4 118 aa17.02■□□□□ 0.32
AP000253.1-201ENST00000449339 VRTNQ9H8Y1 702 aa17.02■□□□□ 0.32
AP000253.1-201ENST00000449339 CHST7Q9NS84 486 aa17.02■□□□□ 0.32
AP000253.1-201ENST00000449339 SEPT4O43236 478 aa17.01■□□□□ 0.31
AP000253.1-201ENST00000449339 SHOX2O60902 331 aaPredicted RBP17.01■□□□□ 0.31
AP000253.1-201ENST00000449339 CILPO75339 1184 aa17.01■□□□□ 0.31
AP000253.1-201ENST00000449339 PAEPP09466 180 aa17.01■□□□□ 0.31
AP000253.1-201ENST00000449339 RARBP10826 455 aa17.01■□□□□ 0.31
AP000253.1-201ENST00000449339 GJC1P36383 396 aa17.01■□□□□ 0.31
AP000253.1-201ENST00000449339 YARSP54577 528 aaKnown RBP17.01■□□□□ 0.31
AP000253.1-201ENST00000449339 NOGQ13253 232 aa17.01■□□□□ 0.31
AP000253.1-201ENST00000449339 KLF1Q13351 362 aaPredicted RBP17.01■□□□□ 0.31
AP000253.1-201ENST00000449339 SNX1Q13596 522 aa17.01■□□□□ 0.31
AP000253.1-201ENST00000449339 ZSCAN26Q16670 478 aa17.01■□□□□ 0.31
AP000253.1-201ENST00000449339 FAM47CQ5HY64 1035 aa17.01■□□□□ 0.31
AP000253.1-201ENST00000449339 EXD1Q8NHP7 514 aa17.01■□□□□ 0.31
AP000253.1-201ENST00000449339 CAPNS2Q96L46 248 aa17.01■□□□□ 0.31
AP000253.1-201ENST00000449339 HEMGNQ9BXL5 484 aa17.01■□□□□ 0.31
AP000253.1-201ENST00000449339 UPF3AQ9H1J1 476 aaKnown RBP17.01■□□□□ 0.31
AP000253.1-201ENST00000449339 TMBIM4Q9HC24 238 aa17.01■□□□□ 0.31
AP000253.1-201ENST00000449339 MED7O43513 233 aa17.01■□□□□ 0.31
AP000253.1-201ENST00000449339 ZNF252P-AS1Q0IIN9 211 aa17.01■□□□□ 0.31
AP000253.1-201ENST00000449339 SPDYCQ5MJ68 293 aa17.01■□□□□ 0.31
AP000253.1-201ENST00000449339 PPP1R15BQ5SWA1 713 aa17.01■□□□□ 0.31
AP000253.1-201ENST00000449339 CYP4A22Q5TCH4 519 aa17.01■□□□□ 0.31
AP000253.1-201ENST00000449339 APBB1IPQ7Z5R6 666 aaPredicted RBP17.01■□□□□ 0.31
AP000253.1-201ENST00000449339 C3orf20Q8ND61 904 aa17.01■□□□□ 0.31
AP000253.1-201ENST00000449339 LHX5Q9H2C1 402 aa17.01■□□□□ 0.31
AP000253.1-201ENST00000449339 PLEKHA5Q9HAU0 1116 aa17.01■□□□□ 0.31
AP000253.1-201ENST00000449339 TJP2Q9UDY2 1190 aa17.01■□□□□ 0.31
AP000253.1-201ENST00000449339 GTF2IRD1Q9UHL9 959 aa17.01■□□□□ 0.31
AP000253.1-201ENST00000449339 CYTH4Q9UIA0 394 aa17.01■□□□□ 0.31
AP000253.1-201ENST00000449339 BRCA2P51587 3418 aa17.01■□□□□ 0.31
AP000253.1-201ENST00000449339 PDCD11Q14690 1871 aaKnown RBP17■□□□□ 0.31
AP000253.1-201ENST00000449339 HMGB1P1B2RPK0 211 aaPredicted RBP17■□□□□ 0.31
AP000253.1-201ENST00000449339 CTSHP09668 335 aa17■□□□□ 0.31
AP000253.1-201ENST00000449339 TAP1Q03518 808 aa17■□□□□ 0.31
AP000253.1-201ENST00000449339 PCBP1Q15365 356 aaKnown RBP eCLIP17■□□□□ 0.31
AP000253.1-201ENST00000449339 ZBTB6Q15916 424 aa17■□□□□ 0.31
AP000253.1-201ENST00000449339 ALKAL1Q6UXT8 129 aa17■□□□□ 0.31
AP000253.1-201ENST00000449339 DPH6Q7L8W6 267 aa17■□□□□ 0.31
AP000253.1-201ENST00000449339 FAM228AQ86W67 206 aa17■□□□□ 0.31
AP000253.1-201ENST00000449339 NT5DC4Q86YG4 428 aa17■□□□□ 0.31
AP000253.1-201ENST00000449339 CAPS2Q9BXY5 557 aa17■□□□□ 0.31
AP000253.1-201ENST00000449339 OSBPL8Q9BZF1 889 aa17■□□□□ 0.31
AP000253.1-201ENST00000449339 CENPHQ9H3R5 247 aa17■□□□□ 0.31
AP000253.1-201ENST00000449339 XPNPEP3Q9NQH7 507 aa17■□□□□ 0.31
AP000253.1-201ENST00000449339 MTRF1LQ9UGC7 380 aaKnown RBP17■□□□□ 0.31
AP000253.1-201ENST00000449339 LCMT1Q9UIC8 334 aa17■□□□□ 0.31
AP000253.1-201ENST00000449339 STRIP2Q9ULQ0 834 aa17■□□□□ 0.31
AP000253.1-201ENST00000449339 F8VP50 259 aa17■□□□□ 0.31
AP000253.1-201ENST00000449339 ADAMTS4O75173 837 aa17■□□□□ 0.31
AP000253.1-201ENST00000449339 P4HA1P13674 534 aa17■□□□□ 0.31
AP000253.1-201ENST00000449339 PRKAR2AP13861 404 aaKnown RBP17■□□□□ 0.31
AP000253.1-201ENST00000449339 TCF4P15884 667 aa17■□□□□ 0.31
AP000253.1-201ENST00000449339 AXLP30530 894 aa17■□□□□ 0.31
AP000253.1-201ENST00000449339 SP3Q02447 781 aa17■□□□□ 0.31
AP000253.1-201ENST00000449339 KRT17Q04695 432 aa17■□□□□ 0.31
AP000253.1-201ENST00000449339 PTPN11Q06124 597 aaPredicted RBP17■□□□□ 0.31
AP000253.1-201ENST00000449339 PTPN20Q4JDL3 420 aa17■□□□□ 0.31
AP000253.1-201ENST00000449339 NME8Q8N427 588 aa17■□□□□ 0.31
AP000253.1-201ENST00000449339 DCLK3Q9C098 648 aa17■□□□□ 0.31
AP000253.1-201ENST00000449339 SPC25Q9HBM1 224 aa17■□□□□ 0.31
AP000253.1-201ENST00000449339 R3HDM2Q9Y2K5 976 aaKnown RBP17■□□□□ 0.31
AP000253.1-201ENST00000449339 CDY2AQ9Y6F7 541 aa17■□□□□ 0.31
AP000253.1-201ENST00000449339 KPNA6O60684 536 aa16.99■□□□□ 0.31
AP000253.1-201ENST00000449339 RPS6KA5O75582 802 aa16.99■□□□□ 0.31
AP000253.1-201ENST00000449339 NDST1P52848 882 aa16.99■□□□□ 0.31
AP000253.1-201ENST00000449339 PMS2P54278 862 aa16.99■□□□□ 0.31
AP000253.1-201ENST00000449339 MRPS6P82932 125 aaKnown RBP16.99■□□□□ 0.31
AP000253.1-201ENST00000449339 OGDHQ02218 1023 aa16.99■□□□□ 0.31
AP000253.1-201ENST00000449339 ARRDC4Q8NCT1 418 aa16.99■□□□□ 0.31
AP000253.1-201ENST00000449339 ART4Q93070 314 aa16.99■□□□□ 0.31
AP000253.1-201ENST00000449339 TMEM176AQ96HP8 235 aa16.99■□□□□ 0.31
AP000253.1-201ENST00000449339 CYP3A43Q9HB55 503 aa16.99■□□□□ 0.31
AP000253.1-201ENST00000449339 HOMER3Q9NSC5 361 aa16.99■□□□□ 0.31
AP000253.1-201ENST00000449339 CNTN3Q9P232 1028 aa16.99■□□□□ 0.31
AP000253.1-201ENST00000449339 FEZ2Q9UHY8 353 aaPredicted RBP16.99■□□□□ 0.31
AP000253.1-201ENST00000449339 CEP350Q5VT06 3117 aa16.99■□□□□ 0.31
AP000253.1-201ENST00000449339 ASGR1P07306 291 aa16.98■□□□□ 0.31
AP000253.1-201ENST00000449339 HNRNPH2P55795 449 aaKnown RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms