RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 DDX43Q9NXZ2 648 aaKnown RBP30.43■■■□□ 2.46
CBX4-202ENST00000448310 STX6O43752 255 aa30.42■■■□□ 2.46
CBX4-202ENST00000448310 NRLP54845 237 aa30.42■■■□□ 2.46
CBX4-202ENST00000448310 PON2Q15165 354 aa30.42■■■□□ 2.46
CBX4-202ENST00000448310 STK38Q15208 465 aa30.42■■■□□ 2.46
CBX4-202ENST00000448310 LPAL2Q16609 132 aa30.42■■■□□ 2.46
CBX4-202ENST00000448310 CCDC142Q17RM4 750 aa30.42■■■□□ 2.46
CBX4-202ENST00000448310 C1orf228Q6PIY5 440 aa30.42■■■□□ 2.46
CBX4-202ENST00000448310 OSTM1Q86WC4 334 aa30.42■■■□□ 2.46
CBX4-202ENST00000448310 MTMR12Q9C0I1 747 aa30.42■■■□□ 2.46
CBX4-202ENST00000448310 ZSCAN16Q9H4T2 348 aaPredicted RBP30.42■■■□□ 2.46
CBX4-202ENST00000448310 SIX4Q9UIU6 781 aa30.42■■■□□ 2.46
CBX4-202ENST00000448310 MAGED2Q9UNF1 606 aaPredicted RBP30.42■■■□□ 2.46
CBX4-202ENST00000448310 HCRTO43612 131 aa30.41■■■□□ 2.46
CBX4-202ENST00000448310 HUS1O60921 280 aa30.41■■■□□ 2.46
CBX4-202ENST00000448310 F11P03951 625 aa30.41■■■□□ 2.46
CBX4-202ENST00000448310 NASPP49321 788 aaPredicted RBP30.41■■■□□ 2.46
CBX4-202ENST00000448310 NLRP12P59046 1061 aa30.41■■■□□ 2.46
CBX4-202ENST00000448310 DMWDQ09019 674 aa30.41■■■□□ 2.46
CBX4-202ENST00000448310 DGLUCYQ7Z3D6 616 aa30.41■■■□□ 2.46
CBX4-202ENST00000448310 CCDC65Q8IXS2 484 aa30.41■■■□□ 2.46
CBX4-202ENST00000448310 CMTM8Q8IZV2 173 aa30.41■■■□□ 2.46
CBX4-202ENST00000448310 SPEM1Q8N4L4 309 aa30.41■■■□□ 2.46
CBX4-202ENST00000448310 CELF5Q8N6W0 485 aaKnown RBP30.41■■■□□ 2.46
CBX4-202ENST00000448310 LRRC52Q8N7C0 313 aa30.41■■■□□ 2.46
CBX4-202ENST00000448310 MAB21L3Q8N8X9 362 aa30.41■■■□□ 2.46
CBX4-202ENST00000448310 TMEM206Q9H813 350 aa30.41■■■□□ 2.46
CBX4-202ENST00000448310 ITGA11Q9UKX5 1188 aa30.41■■■□□ 2.46
CBX4-202ENST00000448310 CCL26Q9Y258 94 aa30.41■■■□□ 2.46
CBX4-202ENST00000448310 SNX9Q9Y5X1 595 aa30.41■■■□□ 2.46
CBX4-202ENST00000448310 PLCB2Q00722 1185 aa30.4■■■□□ 2.46
CBX4-202ENST00000448310 NFE2Q16621 373 aaPredicted RBP30.4■■■□□ 2.46
CBX4-202ENST00000448310 DDR2Q16832 855 aa30.4■■■□□ 2.46
CBX4-202ENST00000448310 GPD1LQ8N335 351 aa30.4■■■□□ 2.46
CBX4-202ENST00000448310 SECISBP2LQ93073 1101 aaKnown RBP30.4■■■□□ 2.46
CBX4-202ENST00000448310 ACBD6Q9BR61 282 aa30.4■■■□□ 2.46
CBX4-202ENST00000448310 C2orf42Q9NWW7 574 aa30.4■■■□□ 2.46
CBX4-202ENST00000448310 ATG2BQ96BY7 2078 aa30.4■■■□□ 2.46
CBX4-202ENST00000448310 TMEM191BP0C7N4 346 aa30.39■■■□□ 2.46
CBX4-202ENST00000448310 CYP2F1P24903 491 aa30.39■■■□□ 2.46
CBX4-202ENST00000448310 MYL7Q01449 175 aa30.39■■■□□ 2.46
CBX4-202ENST00000448310 PUM1Q14671 1186 aaKnown RBP eCLIP30.39■■■□□ 2.461e-11■□□□□ 10.1
CBX4-202ENST00000448310 RSPO4Q2I0M5 234 aaPredicted RBP30.39■■■□□ 2.46
CBX4-202ENST00000448310 INTS6LQ5JSJ4 861 aaKnown RBP30.39■■■□□ 2.46
CBX4-202ENST00000448310 TXNDC8Q6A555 127 aa30.39■■■□□ 2.46
CBX4-202ENST00000448310 LINC00301Q8NCQ3 95 aa30.39■■■□□ 2.46
CBX4-202ENST00000448310 GKN1Q9NS71 199 aa30.39■■■□□ 2.46
CBX4-202ENST00000448310 THG1LQ9NWX6 298 aaKnown RBP30.39■■■□□ 2.46
CBX4-202ENST00000448310 GTF3C4Q9UKN8 822 aa30.39■■■□□ 2.46
CBX4-202ENST00000448310 PTPRJQ12913 1337 aa30.39■■■□□ 2.46
CBX4-202ENST00000448310 CHURC1-FNTBB4DL54 471 aa30.38■■■□□ 2.45
CBX4-202ENST00000448310 K7ELQ4 463 aaPredicted RBP30.38■■■□□ 2.45
CBX4-202ENST00000448310 AVPR1AP37288 418 aa30.38■■■□□ 2.45
CBX4-202ENST00000448310 FNTBP49356 437 aa30.38■■■□□ 2.45
CBX4-202ENST00000448310 RBP5P82980 135 aa30.38■■■□□ 2.45
CBX4-202ENST00000448310 ITPRIPL2Q3MIP1 535 aa30.38■■■□□ 2.45
CBX4-202ENST00000448310 DGKKQ5KSL6 1271 aa30.38■■■□□ 2.45
CBX4-202ENST00000448310 ADGRF2Q8IZF7 708 aa30.38■■■□□ 2.45
CBX4-202ENST00000448310 TMEM86AQ8N2M4 240 aa30.38■■■□□ 2.45
CBX4-202ENST00000448310 LEO1Q8WVC0 666 aaPredicted RBP30.38■■■□□ 2.45
CBX4-202ENST00000448310 USP13Q92995 863 aaPredicted RBP30.38■■■□□ 2.45
CBX4-202ENST00000448310 PKMYT1Q99640 499 aa30.38■■■□□ 2.45
CBX4-202ENST00000448310 GDAP2Q9NXN4 497 aa30.38■■■□□ 2.45
CBX4-202ENST00000448310 DLL3Q9NYJ7 618 aa30.38■■■□□ 2.45
CBX4-202ENST00000448310 TFIP11Q9UBB9 837 aaKnown RBP30.38■■■□□ 2.45
CBX4-202ENST00000448310 MED19A0JLT2 244 aaPredicted RBP30.37■■■□□ 2.45
CBX4-202ENST00000448310 CSH1P0DML2 217 aa30.37■■■□□ 2.45
CBX4-202ENST00000448310 CSH2P0DML3 217 aa30.37■■■□□ 2.45
CBX4-202ENST00000448310 HOXC13P31276 330 aa30.37■■■□□ 2.45
CBX4-202ENST00000448310 E2F4Q16254 413 aa30.37■■■□□ 2.45
CBX4-202ENST00000448310 TRIM68Q6AZZ1 485 aa30.37■■■□□ 2.45
CBX4-202ENST00000448310 PRR23BQ6ZRT6 265 aa30.37■■■□□ 2.45
CBX4-202ENST00000448310 CBWD2Q8IUF1 395 aa30.37■■■□□ 2.45
CBX4-202ENST00000448310 OR5B17Q8NGF7 314 aa30.37■■■□□ 2.45
CBX4-202ENST00000448310 RIN3Q8TB24 985 aa30.37■■■□□ 2.45
CBX4-202ENST00000448310 TNMDQ9H2S6 317 aa30.37■■■□□ 2.45
CBX4-202ENST00000448310 GMEB2Q9UKD1 530 aa30.37■■■□□ 2.45
CBX4-202ENST00000448310 ANAPC1Q9H1A4 1944 aa30.36■■■□□ 2.45
CBX4-202ENST00000448310 K7ESF4 209 aa30.36■■■□□ 2.45
CBX4-202ENST00000448310 SPTLC2O15270 562 aa30.36■■■□□ 2.45
CBX4-202ENST00000448310 SRSF5Q13243 272 aaKnown RBP30.36■■■□□ 2.45
CBX4-202ENST00000448310 CCINQ13939 588 aa30.36■■■□□ 2.45
CBX4-202ENST00000448310 HEATR6Q6AI08 1181 aaKnown RBP30.36■■■□□ 2.45
CBX4-202ENST00000448310 MRPS31Q92665 395 aaKnown RBP30.36■■■□□ 2.45
CBX4-202ENST00000448310 ANKRD36BP1Q96IX9 119 aa30.36■■■□□ 2.45
CBX4-202ENST00000448310 FAM83CQ9BQN1 747 aa30.36■■■□□ 2.45
CBX4-202ENST00000448310 PARD6AQ9NPB6 346 aa30.36■■■□□ 2.45
CBX4-202ENST00000448310 HPS4Q9NQG7 708 aa30.36■■■□□ 2.45
CBX4-202ENST00000448310 INTS13Q9NVM9 706 aa30.36■■■□□ 2.45
CBX4-202ENST00000448310 ZMYM5Q9UJ78 669 aa30.36■■■□□ 2.45
CBX4-202ENST00000448310 RAB23Q9ULC3 237 aa30.36■■■□□ 2.45
CBX4-202ENST00000448310 USP18Q9UMW8 372 aa30.36■■■□□ 2.45
CBX4-202ENST00000448310 GREB1Q4ZG55 1949 aa30.35■■■□□ 2.45
CBX4-202ENST00000448310 TADA3O75528 432 aa30.35■■■□□ 2.45
CBX4-202ENST00000448310 DDX6P26196 483 aaKnown RBP eCLIP30.35■■■□□ 2.453e-6■■■■□ 23.9
CBX4-202ENST00000448310 HOXD13P35453 343 aa30.35■■■□□ 2.45
CBX4-202ENST00000448310 RPL10AP62906 217 aaKnown RBP30.35■■■□□ 2.45
CBX4-202ENST00000448310 SOWAHAQ2M3V2 549 aa30.35■■■□□ 2.45
CBX4-202ENST00000448310 TOP6BLQ8N6T0 577 aa30.35■■■□□ 2.45
CBX4-202ENST00000448310 DHX58Q96C10 678 aa30.35■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms