RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 ZBTB6Q15916 424 aa9.28□□□□□ -0.92
NIPBL-202ENST00000448238 SCFD2Q8WU76 684 aa9.28□□□□□ -0.92
NIPBL-202ENST00000448238 RIOK2Q9BVS4 552 aaKnown RBP9.28□□□□□ -0.92
NIPBL-202ENST00000448238 COPS7BQ9H9Q2 264 aaPredicted RBP9.28□□□□□ -0.92
NIPBL-202ENST00000448238 ZNF222Q9UK12 451 aa9.28□□□□□ -0.92
NIPBL-202ENST00000448238 ANKRD6Q9Y2G4 727 aa9.28□□□□□ -0.92
NIPBL-202ENST00000448238 RAD54BQ9Y620 910 aa9.28□□□□□ -0.92
NIPBL-202ENST00000448238 MROH5Q6ZUA9 1318 aa9.28□□□□□ -0.92
NIPBL-202ENST00000448238 PHGDHO43175 533 aaKnown RBP9.28□□□□□ -0.92
NIPBL-202ENST00000448238 PPP1R37O75864 691 aa9.28□□□□□ -0.92
NIPBL-202ENST00000448238 CDH6P55285 790 aa9.28□□□□□ -0.92
NIPBL-202ENST00000448238 FAM220AQ7Z4H9 259 aa9.28□□□□□ -0.92
NIPBL-202ENST00000448238 TRIM48Q8IWZ4 208 aa9.28□□□□□ -0.92
NIPBL-202ENST00000448238 SYTL1Q8IYJ3 562 aa9.28□□□□□ -0.92
NIPBL-202ENST00000448238 FNIP1Q8TF40 1166 aa9.28□□□□□ -0.92
NIPBL-202ENST00000448238 ACOT12Q8WYK0 555 aa9.28□□□□□ -0.92
NIPBL-202ENST00000448238 RASSF1Q9NS23 344 aa9.28□□□□□ -0.92
NIPBL-202ENST00000448238 NUP50Q9UKX7 468 aa9.28□□□□□ -0.92
NIPBL-202ENST00000448238 MYH6P13533 1939 aa9.28□□□□□ -0.92
NIPBL-202ENST00000448238 MTSS1O43312 755 aa9.27□□□□□ -0.92
NIPBL-202ENST00000448238 GRK4P32298 578 aa9.27□□□□□ -0.92
NIPBL-202ENST00000448238 KYAT1Q16773 422 aa9.27□□□□□ -0.92
NIPBL-202ENST00000448238 RABL6Q3YEC7 729 aaPredicted RBP9.27□□□□□ -0.92
NIPBL-202ENST00000448238 ZFP1Q6P2D0 407 aa9.27□□□□□ -0.92
NIPBL-202ENST00000448238 SMYD1Q8NB12 490 aa9.27□□□□□ -0.92
NIPBL-202ENST00000448238 HPS3Q969F9 1004 aa9.27□□□□□ -0.92
NIPBL-202ENST00000448238 R3HDM2Q9Y2K5 976 aaKnown RBP9.27□□□□□ -0.92
NIPBL-202ENST00000448238 SLC30A1Q9Y6M5 507 aa9.27□□□□□ -0.92
NIPBL-202ENST00000448238 TROQ12816 1431 aaPredicted RBP9.27□□□□□ -0.92
NIPBL-202ENST00000448238 A0A1W2PQ72 361 aa9.27□□□□□ -0.92
NIPBL-202ENST00000448238 ALAS1P13196 640 aa9.27□□□□□ -0.92
NIPBL-202ENST00000448238 STOMP27105 288 aa9.27□□□□□ -0.92
NIPBL-202ENST00000448238 ARPP19P56211 112 aa9.27□□□□□ -0.92
NIPBL-202ENST00000448238 FAM69CQ0P6D2 419 aa9.27□□□□□ -0.92
NIPBL-202ENST00000448238 WASHC2DQ5SRD0 308 aa9.27□□□□□ -0.92
NIPBL-202ENST00000448238 PTRHD1Q6GMV3 140 aaKnown RBP9.27□□□□□ -0.92
NIPBL-202ENST00000448238 NUDT12Q9BQG2 462 aa9.27□□□□□ -0.92
NIPBL-202ENST00000448238 LMBRD1Q9NUN5 540 aa9.27□□□□□ -0.92
NIPBL-202ENST00000448238 KLHL11Q9NVR0 708 aa9.27□□□□□ -0.92
NIPBL-202ENST00000448238 OR7A10O76100 309 aa9.27□□□□□ -0.93
NIPBL-202ENST00000448238 CDC16Q13042 620 aa9.27□□□□□ -0.93
NIPBL-202ENST00000448238 DLGAP5Q15398 846 aa9.27□□□□□ -0.93
NIPBL-202ENST00000448238 ZNF699Q32M78 642 aa9.27□□□□□ -0.93
NIPBL-202ENST00000448238 CCDC137Q6PK04 289 aaKnown RBP9.27□□□□□ -0.93
NIPBL-202ENST00000448238 ETAA1Q9NY74 926 aa9.27□□□□□ -0.93
NIPBL-202ENST00000448238 EURLQ9NYK6 297 aa9.27□□□□□ -0.93
NIPBL-202ENST00000448238 SNX7Q9UNH6 387 aa9.27□□□□□ -0.93
NIPBL-202ENST00000448238 TRIM38O00635 465 aa9.27□□□□□ -0.93
NIPBL-202ENST00000448238 PSMB9P28065 219 aa9.27□□□□□ -0.93
NIPBL-202ENST00000448238 CCND2P30279 289 aa9.27□□□□□ -0.93
NIPBL-202ENST00000448238 PIK3CBP42338 1070 aa9.27□□□□□ -0.93
NIPBL-202ENST00000448238 CACNA2D1P54289 1103 aa9.27□□□□□ -0.93
NIPBL-202ENST00000448238 MAPK11Q15759 364 aa9.27□□□□□ -0.93
NIPBL-202ENST00000448238 C8orf34Q49A92 452 aa9.27□□□□□ -0.93
NIPBL-202ENST00000448238 ASPRV1Q53RT3 343 aa9.27□□□□□ -0.93
NIPBL-202ENST00000448238 CC2D1AQ6P1N0 951 aaPredicted RBP9.27□□□□□ -0.93
NIPBL-202ENST00000448238 NIM1KQ8IY84 436 aa9.27□□□□□ -0.93
NIPBL-202ENST00000448238 MEIOBQ8N635 442 aa9.27□□□□□ -0.93
NIPBL-202ENST00000448238 OR6B3Q8NGW1 331 aa9.27□□□□□ -0.93
NIPBL-202ENST00000448238 SUN5Q8TC36 379 aa9.27□□□□□ -0.93
NIPBL-202ENST00000448238 AMNQ9BXJ7 453 aa9.27□□□□□ -0.93
NIPBL-202ENST00000448238 HPS4Q9NQG7 708 aa9.27□□□□□ -0.93
NIPBL-202ENST00000448238 ADAMTS2O95450 1211 aa9.27□□□□□ -0.93
NIPBL-202ENST00000448238 DHFRP00374 187 aa9.27□□□□□ -0.93
NIPBL-202ENST00000448238 THRAP10827 490 aa9.27□□□□□ -0.93
NIPBL-202ENST00000448238 PFKFB3Q16875 520 aaPredicted RBP9.27□□□□□ -0.93
NIPBL-202ENST00000448238 KRT24Q2M2I5 525 aa9.27□□□□□ -0.93
NIPBL-202ENST00000448238 CCT8L2Q96SF2 557 aa9.27□□□□□ -0.93
NIPBL-202ENST00000448238 ILKAPQ9H0C8 392 aaPredicted RBP9.27□□□□□ -0.93
NIPBL-202ENST00000448238 TRIT1Q9H3H1 467 aaKnown RBP9.27□□□□□ -0.93
NIPBL-202ENST00000448238 C19orf44Q9H6X5 657 aa9.27□□□□□ -0.93
NIPBL-202ENST00000448238 ALDH1B1P30837 517 aa9.27□□□□□ -0.93
NIPBL-202ENST00000448238 DDI2Q5TDH0 399 aa9.27□□□□□ -0.93
NIPBL-202ENST00000448238 LRRC70Q7Z2Q7 622 aa9.27□□□□□ -0.93
NIPBL-202ENST00000448238 C1orf131Q8NDD1 294 aaKnown RBP9.27□□□□□ -0.93
NIPBL-202ENST00000448238 KCNJ14Q9UNX9 436 aa9.27□□□□□ -0.93
NIPBL-202ENST00000448238 VAV1P15498 845 aa9.27□□□□□ -0.93
NIPBL-202ENST00000448238 ILF2Q12905 390 aaKnown RBP9.27□□□□□ -0.93
NIPBL-202ENST00000448238 KNOP1Q1ED39 458 aaKnown RBP9.27□□□□□ -0.93
NIPBL-202ENST00000448238 FBXO38Q6PIJ6 1188 aa9.27□□□□□ -0.93
NIPBL-202ENST00000448238 LRRC69Q6ZNQ3 347 aa9.27□□□□□ -0.93
NIPBL-202ENST00000448238 PLEKHM2Q8IWE5 1019 aa9.27□□□□□ -0.93
NIPBL-202ENST00000448238 UNKQ9C0B0 810 aaKnown RBP9.27□□□□□ -0.93
NIPBL-202ENST00000448238 MLXIPLQ9NP71 852 aa9.27□□□□□ -0.93
NIPBL-202ENST00000448238 SNX24Q9Y343 169 aa9.27□□□□□ -0.93
NIPBL-202ENST00000448238 ADGRA2Q96PE1 1338 aa9.27□□□□□ -0.93
NIPBL-202ENST00000448238 PARNO95453 639 aaKnown RBP9.26□□□□□ -0.93
NIPBL-202ENST00000448238 PSAPP07602 524 aa9.26□□□□□ -0.93
NIPBL-202ENST00000448238 FAM58BPP0C7Q3 252 aa9.26□□□□□ -0.93
NIPBL-202ENST00000448238 POU1F1P28069 291 aa9.26□□□□□ -0.93
NIPBL-202ENST00000448238 TKTP29401 623 aaKnown RBP9.26□□□□□ -0.93
NIPBL-202ENST00000448238 FAM98BQ52LJ0 330 aaKnown RBP9.26□□□□□ -0.93
NIPBL-202ENST00000448238 CEP170P1Q96L14 293 aa9.26□□□□□ -0.93
NIPBL-202ENST00000448238 Q96MT0 163 aa9.26□□□□□ -0.93
NIPBL-202ENST00000448238 TASP1Q9H6P5 420 aa9.26□□□□□ -0.93
NIPBL-202ENST00000448238 CNOT8Q9UFF9 292 aaKnown RBP9.26□□□□□ -0.93
NIPBL-202ENST00000448238 AP3M1Q9Y2T2 418 aa9.26□□□□□ -0.93
NIPBL-202ENST00000448238 SNAP23O00161 211 aa9.26□□□□□ -0.93
NIPBL-202ENST00000448238 ENO2P09104 434 aaPredicted RBP9.26□□□□□ -0.93
NIPBL-202ENST00000448238 CD58P19256 250 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms