RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 LCA5LO95447 670 aa20.73■□□□□ 0.91
SGCE-207ENST00000447873 MYOGP15173 224 aa20.73■□□□□ 0.91
SGCE-207ENST00000447873 KRT83P78385 493 aa20.73■□□□□ 0.91
SGCE-207ENST00000447873 TSPY1Q01534 308 aa20.73■□□□□ 0.91
SGCE-207ENST00000447873 MRPL58Q14197 206 aaKnown RBP20.73■□□□□ 0.91
SGCE-207ENST00000447873 CTXN3Q4LDR2 81 aa20.73■□□□□ 0.91
SGCE-207ENST00000447873 MDH1BQ5I0G3 518 aa20.73■□□□□ 0.91
SGCE-207ENST00000447873 RTP2Q5QGT7 225 aa20.73■□□□□ 0.91
SGCE-207ENST00000447873 CCDC122Q5T0U0 273 aa20.73■□□□□ 0.91
SGCE-207ENST00000447873 PPP1R26Q5T8A7 1209 aaPredicted RBP20.73■□□□□ 0.91
SGCE-207ENST00000447873 KIAA0319Q5VV43 1072 aa20.73■□□□□ 0.91
SGCE-207ENST00000447873 ARHGAP17Q68EM7 881 aa20.73■□□□□ 0.91
SGCE-207ENST00000447873 ALKBH5Q6P6C2 394 aaKnown RBP20.73■□□□□ 0.91
SGCE-207ENST00000447873 TRIM72Q6ZMU5 477 aa20.73■□□□□ 0.91
SGCE-207ENST00000447873 ANKS3Q6ZW76 656 aa20.73■□□□□ 0.91
SGCE-207ENST00000447873 DDX53Q86TM3 631 aaKnown RBP20.73■□□□□ 0.91
SGCE-207ENST00000447873 PALB2Q86YC2 1186 aa20.73■□□□□ 0.91
SGCE-207ENST00000447873 PASD1Q8IV76 773 aa20.73■□□□□ 0.91
SGCE-207ENST00000447873 ACRBPQ8NEB7 543 aa20.73■□□□□ 0.91
SGCE-207ENST00000447873 OR10T2Q8NGX3 314 aa20.73■□□□□ 0.91
SGCE-207ENST00000447873 CRTAC1Q9NQ79 661 aa20.73■□□□□ 0.91
SGCE-207ENST00000447873 STK39Q9UEW8 545 aa20.73■□□□□ 0.91
SGCE-207ENST00000447873 PCDHGC3Q9UN70 934 aa20.73■□□□□ 0.91
SGCE-207ENST00000447873 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.73■□□□□ 0.91
SGCE-207ENST00000447873 CEP83Q9Y592 693 aa20.73■□□□□ 0.91
SGCE-207ENST00000447873 H7C4K7 107 aa20.72■□□□□ 0.91
SGCE-207ENST00000447873 ZNF263O14978 683 aa20.72■□□□□ 0.91
SGCE-207ENST00000447873 FGF18O76093 207 aa20.72■□□□□ 0.91
SGCE-207ENST00000447873 CFHP08603 1231 aa20.72■□□□□ 0.91
SGCE-207ENST00000447873 CCDC175P0C221 793 aa20.72■□□□□ 0.91
SGCE-207ENST00000447873 CTNNB1P35222 781 aa20.72■□□□□ 0.91
SGCE-207ENST00000447873 BMPR1AP36894 532 aa20.72■□□□□ 0.91
SGCE-207ENST00000447873 INTS6LQ5JSJ4 861 aaKnown RBP20.72■□□□□ 0.91
SGCE-207ENST00000447873 LCLAT1Q6UWP7 414 aa20.72■□□□□ 0.91
SGCE-207ENST00000447873 CHST7Q9NS84 486 aa20.72■□□□□ 0.91
SGCE-207ENST00000447873 GTF3C4Q9UKN8 822 aa20.72■□□□□ 0.91
SGCE-207ENST00000447873 TSPAN16Q9UKR8 245 aa20.72■□□□□ 0.91
SGCE-207ENST00000447873 PCDHA11Q9Y5I1 949 aa20.72■□□□□ 0.91
SGCE-207ENST00000447873 ADGRG1Q9Y653 693 aa20.72■□□□□ 0.91
SGCE-207ENST00000447873 PDE4DIPQ5VU43 2346 aa20.72■□□□□ 0.91
SGCE-207ENST00000447873 MYBPHLA2RUH7 354 aa20.72■□□□□ 0.91
SGCE-207ENST00000447873 TMCO5BA8MYB1 307 aa20.72■□□□□ 0.91
SGCE-207ENST00000447873 M0QYV0 167 aa20.72■□□□□ 0.91
SGCE-207ENST00000447873 CAPN15O75808 1086 aa20.72■□□□□ 0.91
SGCE-207ENST00000447873 MICAL2O94851 1124 aa20.72■□□□□ 0.91
SGCE-207ENST00000447873 CA3P07451 260 aa20.72■□□□□ 0.91
SGCE-207ENST00000447873 GZMAP12544 262 aa20.72■□□□□ 0.91
SGCE-207ENST00000447873 CCDC130P13994 396 aa20.72■□□□□ 0.91
SGCE-207ENST00000447873 BMP8BP34820 402 aa20.72■□□□□ 0.91
SGCE-207ENST00000447873 PLCB3Q01970 1234 aa20.72■□□□□ 0.91
SGCE-207ENST00000447873 MAPRE1Q15691 268 aaKnown RBP20.72■□□□□ 0.91
SGCE-207ENST00000447873 CLEC16AQ2KHT3 1053 aa20.72■□□□□ 0.91
SGCE-207ENST00000447873 KLHL23Q8NBE8 558 aa20.72■□□□□ 0.91
SGCE-207ENST00000447873 MYCBPAPQ8TBZ2 947 aa20.72■□□□□ 0.91
SGCE-207ENST00000447873 SLC2A14Q8TDB8 520 aa20.72■□□□□ 0.91
SGCE-207ENST00000447873 HERC2P3Q9BVR0 1158 aa20.72■□□□□ 0.91
SGCE-207ENST00000447873 LUC7LQ9NQ29 371 aaKnown RBP20.72■□□□□ 0.91
SGCE-207ENST00000447873 MYH10P35580 1976 aa20.71■□□□□ 0.91
SGCE-207ENST00000447873 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.71■□□□□ 0.91
SGCE-207ENST00000447873 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.71■□□□□ 0.91
SGCE-207ENST00000447873 OR6C75A6NL08 312 aa20.71■□□□□ 0.91
SGCE-207ENST00000447873 LSM8O95777 96 aaKnown RBP20.71■□□□□ 0.91
SGCE-207ENST00000447873 CYP1A1P04798 512 aaPredicted RBP20.71■□□□□ 0.91
SGCE-207ENST00000447873 ADORA2BP29275 332 aa20.71■□□□□ 0.91
SGCE-207ENST00000447873 MAGEA1P43355 309 aa20.71■□□□□ 0.91
SGCE-207ENST00000447873 GLUD2P49448 558 aa20.71■□□□□ 0.91
SGCE-207ENST00000447873 CCDC142Q17RM4 750 aa20.71■□□□□ 0.91
SGCE-207ENST00000447873 GOLGA7BQ2TAP0 167 aa20.71■□□□□ 0.91
SGCE-207ENST00000447873 C10orf76Q5T2E6 689 aa20.71■□□□□ 0.91
SGCE-207ENST00000447873 VPS52Q8N1B4 723 aa20.71■□□□□ 0.91
SGCE-207ENST00000447873 TMEM35BQ8NCS4 154 aa20.71■□□□□ 0.91
SGCE-207ENST00000447873 RIN2Q8WYP3 895 aaPredicted RBP20.71■□□□□ 0.91
SGCE-207ENST00000447873 TMEM209Q96SK2 561 aa20.71■□□□□ 0.91
SGCE-207ENST00000447873 MED10Q9BTT4 135 aa20.71■□□□□ 0.91
SGCE-207ENST00000447873 PLVAPQ9BX97 442 aa20.71■□□□□ 0.91
SGCE-207ENST00000447873 OXCT2Q9BYC2 517 aaPredicted RBP20.71■□□□□ 0.91
SGCE-207ENST00000447873 LHX5Q9H2C1 402 aa20.71■□□□□ 0.91
SGCE-207ENST00000447873 HESX1Q9UBX0 185 aa20.71■□□□□ 0.91
SGCE-207ENST00000447873 REXO2Q9Y3B8 237 aaKnown RBP20.71■□□□□ 0.91
SGCE-207ENST00000447873 PCDHA13Q9Y5I0 950 aa20.71■□□□□ 0.91
SGCE-207ENST00000447873 FAM170AA1A519 330 aa20.7■□□□□ 0.9
SGCE-207ENST00000447873 UNGP13051 313 aaPredicted RBP20.7■□□□□ 0.9
SGCE-207ENST00000447873 NAA35Q5VZE5 725 aa20.7■□□□□ 0.9
SGCE-207ENST00000447873 DENND1BQ6P3S1 775 aa20.7■□□□□ 0.9
SGCE-207ENST00000447873 FAM171BQ6P995 826 aa20.7■□□□□ 0.9
SGCE-207ENST00000447873 PRSS55Q6UWB4 352 aaPredicted RBP20.7■□□□□ 0.9
SGCE-207ENST00000447873 DCP1BQ8IZD4 617 aaKnown RBP20.7■□□□□ 0.9
SGCE-207ENST00000447873 PIK3R5Q8WYR1 880 aa20.7■□□□□ 0.9
SGCE-207ENST00000447873 PCED1BQ96HM7 432 aa20.7■□□□□ 0.9
SGCE-207ENST00000447873 HNRNPABQ99729 332 aaKnown RBP20.7■□□□□ 0.9
SGCE-207ENST00000447873 C17orf80Q9BSJ5 609 aa20.7■□□□□ 0.9
SGCE-207ENST00000447873 ZNF518BQ9C0D4 1074 aa20.7■□□□□ 0.9
SGCE-207ENST00000447873 ZCWPW1Q9H0M4 648 aa20.7■□□□□ 0.9
SGCE-207ENST00000447873 TAS2R14Q9NYV8 317 aa20.7■□□□□ 0.9
SGCE-207ENST00000447873 NENFQ9UMX5 172 aa20.7■□□□□ 0.9
SGCE-207ENST00000447873 PPP2R2CQ9Y2T4 447 aa20.7■□□□□ 0.9
SGCE-207ENST00000447873 PLXNA4Q9HCM2 1894 aa20.7■□□□□ 0.9
SGCE-207ENST00000447873 C2CD2LO14523 706 aa20.69■□□□□ 0.9
SGCE-207ENST00000447873 URODP06132 367 aa20.69■□□□□ 0.9
SGCE-207ENST00000447873 NSFP46459 744 aaKnown RBP20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms