RNA–Protein interactions for RNA: ENST00000447480.5

TRIM4-204, Transcript of tripartite motif containing 4, humanhuman

TSL 3

Gene TRIM4, Length 639 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-204ENST00000447480 VSIG1Q86XK7 387 aa8.03□□□□□ -1.12
TRIM4-204ENST00000447480 RPUSD2Q8IZ73 545 aaKnown RBP8.03□□□□□ -1.12
TRIM4-204ENST00000447480 CRIPAKQ8N1N5 446 aa8.03□□□□□ -1.12
TRIM4-204ENST00000447480 FITM2Q8N6M3 262 aa8.03□□□□□ -1.12
TRIM4-204ENST00000447480 SYT2Q8N9I0 419 aaPredicted RBP8.03□□□□□ -1.12
TRIM4-204ENST00000447480 RDM1Q8NG50 284 aa8.03□□□□□ -1.12
TRIM4-204ENST00000447480 TEKT4Q8WW24 435 aa8.03□□□□□ -1.12
TRIM4-204ENST00000447480 USP6NLQ92738 828 aa8.03□□□□□ -1.12
TRIM4-204ENST00000447480 GFM2Q969S9 779 aaKnown RBP8.03□□□□□ -1.12
TRIM4-204ENST00000447480 ALKBH8Q96BT7 664 aaKnown RBP8.03□□□□□ -1.12
TRIM4-204ENST00000447480 ZSWIM1Q9BR11 485 aa8.03□□□□□ -1.12
TRIM4-204ENST00000447480 TIPINQ9BVW5 301 aa8.03□□□□□ -1.12
TRIM4-204ENST00000447480 TRAIPQ9BWF2 469 aa8.03□□□□□ -1.12
TRIM4-204ENST00000447480 AP5M1Q9H0R1 490 aa8.03□□□□□ -1.12
TRIM4-204ENST00000447480 SEMA4AQ9H3S1 761 aa8.03□□□□□ -1.12
TRIM4-204ENST00000447480 ETNK1Q9HBU6 452 aa8.03□□□□□ -1.12
TRIM4-204ENST00000447480 DDX43Q9NXZ2 648 aaKnown RBP8.03□□□□□ -1.12
TRIM4-204ENST00000447480 CIDEBQ9UHD4 219 aa8.03□□□□□ -1.12
TRIM4-204ENST00000447480 GJD2Q9UKL4 321 aa8.03□□□□□ -1.12
TRIM4-204ENST00000447480 TMCO1Q9UM00 188 aa8.03□□□□□ -1.12
TRIM4-204ENST00000447480 PTPN22Q9Y2R2 807 aa8.03□□□□□ -1.12
TRIM4-204ENST00000447480 FAM47DPA6NHR8 397 aa8.02□□□□□ -1.13
TRIM4-204ENST00000447480 C2CD2LO14523 706 aa8.02□□□□□ -1.13
TRIM4-204ENST00000447480 SORBS3O60504 671 aa8.02□□□□□ -1.13
TRIM4-204ENST00000447480 DNAJC6O75061 913 aa8.02□□□□□ -1.13
TRIM4-204ENST00000447480 ATP2C2O75185 946 aa8.02□□□□□ -1.13
TRIM4-204ENST00000447480 TGDSO95455 350 aa8.02□□□□□ -1.13
TRIM4-204ENST00000447480 RPLP2P05387 115 aaKnown RBP8.02□□□□□ -1.13
TRIM4-204ENST00000447480 PGK2P07205 417 aa8.02□□□□□ -1.13
TRIM4-204ENST00000447480 RARBP10826 455 aa8.02□□□□□ -1.13
TRIM4-204ENST00000447480 PIM1P11309 404 aaPredicted RBP8.02□□□□□ -1.13
TRIM4-204ENST00000447480 MYCLP12524 364 aaPredicted RBP8.02□□□□□ -1.13
TRIM4-204ENST00000447480 BRAFP15056 766 aa8.02□□□□□ -1.13
TRIM4-204ENST00000447480 CYP11B2P19099 503 aa8.02□□□□□ -1.13
TRIM4-204ENST00000447480 EIF2AK2P19525 551 aaKnown RBP8.02□□□□□ -1.13
TRIM4-204ENST00000447480 HOXA13P31271 388 aaPredicted RBP8.02□□□□□ -1.13
TRIM4-204ENST00000447480 SFNP31947 248 aa8.02□□□□□ -1.13
TRIM4-204ENST00000447480 ICAM3P32942 547 aa8.02□□□□□ -1.13
TRIM4-204ENST00000447480 SLC1A1P43005 524 aa8.02□□□□□ -1.13
TRIM4-204ENST00000447480 RPL21P46778 160 aaKnown RBP8.02□□□□□ -1.13
TRIM4-204ENST00000447480 CPT1AP50416 773 aa8.02□□□□□ -1.13
TRIM4-204ENST00000447480 LBX1P52954 281 aa8.02□□□□□ -1.13
TRIM4-204ENST00000447480 RNASE9P60153 205 aaKnown RBP8.02□□□□□ -1.13
TRIM4-204ENST00000447480 IFI35P80217 286 aaPredicted RBP8.02□□□□□ -1.13
TRIM4-204ENST00000447480 KRT76Q01546 638 aa8.02□□□□□ -1.13
TRIM4-204ENST00000447480 ALCAMQ13740 583 aa8.02□□□□□ -1.13
TRIM4-204ENST00000447480 LAMC2Q13753 1193 aa8.02□□□□□ -1.13
TRIM4-204ENST00000447480 ITGA9Q13797 1035 aa8.02□□□□□ -1.13
TRIM4-204ENST00000447480 PTK6Q13882 451 aa8.02□□□□□ -1.13
TRIM4-204ENST00000447480 SPARCL1Q14515 664 aa8.02□□□□□ -1.13
TRIM4-204ENST00000447480 KRT72Q14CN4 511 aa8.02□□□□□ -1.13
TRIM4-204ENST00000447480 Q4G0T1 1027 aa8.02□□□□□ -1.13
TRIM4-204ENST00000447480 RHBDF2Q6PJF5 856 aa8.02□□□□□ -1.13
TRIM4-204ENST00000447480 CCDC137Q6PK04 289 aaKnown RBP8.02□□□□□ -1.13
TRIM4-204ENST00000447480 SLC30A10Q6XR72 485 aa8.02□□□□□ -1.13
TRIM4-204ENST00000447480 DYMQ7RTS9 669 aa8.02□□□□□ -1.13
TRIM4-204ENST00000447480 ADGRG6Q86SQ4 1221 aa8.02□□□□□ -1.13
TRIM4-204ENST00000447480 ERICH1Q86X53 443 aa8.02□□□□□ -1.13
TRIM4-204ENST00000447480 SLC13A5Q86YT5 568 aaPredicted RBP8.02□□□□□ -1.13
TRIM4-204ENST00000447480 EXOC8Q8IYI6 725 aa8.02□□□□□ -1.13
TRIM4-204ENST00000447480 PRELID2Q8N945 189 aa8.02□□□□□ -1.13
TRIM4-204ENST00000447480 CCDC89Q8N998 374 aa8.02□□□□□ -1.13
TRIM4-204ENST00000447480 PCSK9Q8NBP7 692 aaKnown RBP8.02□□□□□ -1.13
TRIM4-204ENST00000447480 ARRDC4Q8NCT1 418 aa8.02□□□□□ -1.13
TRIM4-204ENST00000447480 ATL2Q8NHH9 583 aa8.02□□□□□ -1.13
TRIM4-204ENST00000447480 U2AF1L4Q8WU68 220 aaKnown RBP8.02□□□□□ -1.13
TRIM4-204ENST00000447480 SLC35C1Q96A29 364 aa8.02□□□□□ -1.13
TRIM4-204ENST00000447480 FAM136AQ96C01 138 aa8.02□□□□□ -1.13
TRIM4-204ENST00000447480 BORCS6Q96GS4 357 aa8.02□□□□□ -1.13
TRIM4-204ENST00000447480 SNF8Q96H20 258 aa8.02□□□□□ -1.13
TRIM4-204ENST00000447480 CFAP57Q96MR6 1250 aa8.02□□□□□ -1.13
TRIM4-204ENST00000447480 OLFM3Q96PB7 478 aa8.02□□□□□ -1.13
TRIM4-204ENST00000447480 TGS1Q96RS0 853 aaKnown RBP8.02□□□□□ -1.13
TRIM4-204ENST00000447480 NUDCD1Q96RS6 583 aa8.02□□□□□ -1.13
TRIM4-204ENST00000447480 PLIN2Q99541 437 aa8.02□□□□□ -1.13
TRIM4-204ENST00000447480 RIT2Q99578 217 aa8.02□□□□□ -1.13
TRIM4-204ENST00000447480 MXRA8Q9BRK3 442 aa8.02□□□□□ -1.13
TRIM4-204ENST00000447480 PACSIN1Q9BY11 444 aa8.02□□□□□ -1.13
TRIM4-204ENST00000447480 DPH5Q9H2P9 285 aa8.02□□□□□ -1.13
TRIM4-204ENST00000447480 EPB41L1Q9H4G0 881 aa8.02□□□□□ -1.13
TRIM4-204ENST00000447480 SIX2Q9NPC8 291 aa8.02□□□□□ -1.13
TRIM4-204ENST00000447480 DDX25Q9UHL0 483 aaKnown RBP8.02□□□□□ -1.13
TRIM4-204ENST00000447480 SLC24A2Q9UI40 661 aa8.02□□□□□ -1.13
TRIM4-204ENST00000447480 PACSIN2Q9UNF0 486 aaPredicted RBP8.02□□□□□ -1.13
TRIM4-204ENST00000447480 DNM3Q9UQ16 869 aa8.02□□□□□ -1.13
TRIM4-204ENST00000447480 SNX24Q9Y343 169 aa8.02□□□□□ -1.13
TRIM4-204ENST00000447480 ALG6Q9Y672 507 aa8.02□□□□□ -1.13
TRIM4-204ENST00000447480 GMEB1Q9Y692 573 aa8.02□□□□□ -1.13
TRIM4-204ENST00000447480 COMMD3-BMI1R4GMX3 469 aa8.02□□□□□ -1.13
TRIM4-204ENST00000447480 MCM3APO60318 1980 aa8.02□□□□□ -1.13
TRIM4-204ENST00000447480 NFASCO94856 1347 aa8.02□□□□□ -1.13
TRIM4-204ENST00000447480 MYH9P35579 1960 aaKnown RBP8.01□□□□□ -1.13
TRIM4-204ENST00000447480 DPPA5A6NC42 116 aa8.01□□□□□ -1.13
TRIM4-204ENST00000447480 TTC36A6NLP5 189 aa8.01□□□□□ -1.13
TRIM4-204ENST00000447480 NOP56O00567 594 aaKnown RBP8.01□□□□□ -1.13
TRIM4-204ENST00000447480 NVLO15381 856 aaKnown RBP8.01□□□□□ -1.13
TRIM4-204ENST00000447480 SEPT4O43236 478 aa8.01□□□□□ -1.13
TRIM4-204ENST00000447480 THAP12O43422 761 aa8.01□□□□□ -1.13
TRIM4-204ENST00000447480 EXOC3O60645 756 aa8.01□□□□□ -1.13
TRIM4-204ENST00000447480 PEX11AO75192 247 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms