RNA–Protein interactions for RNA: ENST00000447098.6

PTCH2-203, Transcript of patched 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTCH2, Length 4,298 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2-203ENST00000447098 ECM29Q5VYK3 1845 aa11.86□□□□□ -0.51
PTCH2-203ENST00000447098 TRMT10CQ7L0Y3 403 aaKnown RBP11.86□□□□□ -0.51
PTCH2-203ENST00000447098 PPP1R14CQ8TAE6 165 aa11.86□□□□□ -0.51
PTCH2-203ENST00000447098 ZBED2Q9BTP6 218 aa11.86□□□□□ -0.51
PTCH2-203ENST00000447098 TMEM117Q9H0C3 514 aa11.86□□□□□ -0.51
PTCH2-203ENST00000447098 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.86□□□□□ -0.51
PTCH2-203ENST00000447098 TRAF3IP3Q9Y228 551 aa11.86□□□□□ -0.51
PTCH2-203ENST00000447098 COL22A1Q8NFW1 1626 aaPredicted RBP11.86□□□□□ -0.51
PTCH2-203ENST00000447098 ZNF536O15090 1300 aa11.86□□□□□ -0.51
PTCH2-203ENST00000447098 PRPSAP2O60256 369 aa11.86□□□□□ -0.51
PTCH2-203ENST00000447098 STAG3L1P0CL83 205 aa11.86□□□□□ -0.51
PTCH2-203ENST00000447098 LCP1P13796 627 aa11.86□□□□□ -0.51
PTCH2-203ENST00000447098 GLRA2P23416 452 aa11.86□□□□□ -0.51
PTCH2-203ENST00000447098 MRPS35P82673 323 aaKnown RBP11.86□□□□□ -0.51
PTCH2-203ENST00000447098 FSTL1Q12841 308 aa11.86□□□□□ -0.51
PTCH2-203ENST00000447098 TEKT4Q8WW24 435 aa11.86□□□□□ -0.51
PTCH2-203ENST00000447098 HPDLQ96IR7 371 aa11.86□□□□□ -0.51
PTCH2-203ENST00000447098 SENP7Q9BQF6 1050 aa11.86□□□□□ -0.51
PTCH2-203ENST00000447098 WRAP73Q9P2S5 460 aaPredicted RBP11.86□□□□□ -0.51
PTCH2-203ENST00000447098 ELNP15502 786 aa11.86□□□□□ -0.51
PTCH2-203ENST00000447098 MUTP22033 750 aa11.86□□□□□ -0.51
PTCH2-203ENST00000447098 CYP24A1Q07973 514 aa11.86□□□□□ -0.51
PTCH2-203ENST00000447098 PPP3CAQ08209 521 aa11.86□□□□□ -0.51
PTCH2-203ENST00000447098 ZNF484Q5JVG2 852 aa11.86□□□□□ -0.51
PTCH2-203ENST00000447098 KCTD17Q8N5Z5 321 aa11.86□□□□□ -0.51
PTCH2-203ENST00000447098 ZNF483Q8TF39 744 aaPredicted RBP11.86□□□□□ -0.51
PTCH2-203ENST00000447098 LENG9Q96B70 501 aa11.86□□□□□ -0.51
PTCH2-203ENST00000447098 GRAMD1AQ96CP6 724 aa11.86□□□□□ -0.51
PTCH2-203ENST00000447098 ZNF570Q96NI8 536 aa11.86□□□□□ -0.51
PTCH2-203ENST00000447098 CDC42EP4Q9H3Q1 356 aaKnown RBP11.86□□□□□ -0.51
PTCH2-203ENST00000447098 LRRC4CQ9HCJ2 640 aa11.86□□□□□ -0.51
PTCH2-203ENST00000447098 VTA1Q9NP79 307 aa11.86□□□□□ -0.51
PTCH2-203ENST00000447098 PAPOLBQ9NRJ5 636 aaKnown RBP11.86□□□□□ -0.51
PTCH2-203ENST00000447098 DLGAP2Q9P1A6 1054 aa11.86□□□□□ -0.51
PTCH2-203ENST00000447098 PRKAG2Q9UGJ0 569 aa11.86□□□□□ -0.51
PTCH2-203ENST00000447098 HAO1Q9UJM8 370 aa11.86□□□□□ -0.51
PTCH2-203ENST00000447098 SLX4Q8IY92 1834 aa11.86□□□□□ -0.51
PTCH2-203ENST00000447098 ASTN1O14525 1302 aa11.86□□□□□ -0.51
PTCH2-203ENST00000447098 RRN3P2A6NIE6 340 aa11.86□□□□□ -0.51
PTCH2-203ENST00000447098 KBTBD13C9JR72 458 aa11.86□□□□□ -0.51
PTCH2-203ENST00000447098 SPAG7O75391 227 aa11.86□□□□□ -0.51
PTCH2-203ENST00000447098 DCTN3O75935 186 aa11.86□□□□□ -0.51
PTCH2-203ENST00000447098 SKIP12755 728 aa11.86□□□□□ -0.51
PTCH2-203ENST00000447098 RBP5P82980 135 aa11.86□□□□□ -0.51
PTCH2-203ENST00000447098 SGSM1Q2NKQ1 1148 aa11.86□□□□□ -0.51
PTCH2-203ENST00000447098 ZCWPW2Q504Y3 356 aa11.86□□□□□ -0.51
PTCH2-203ENST00000447098 CYP4A22Q5TCH4 519 aa11.86□□□□□ -0.51
PTCH2-203ENST00000447098 C6orf163Q5TEZ5 329 aa11.86□□□□□ -0.51
PTCH2-203ENST00000447098 SPRYD7Q5W111 196 aa11.86□□□□□ -0.51
PTCH2-203ENST00000447098 EXOC3L1Q86VI1 746 aa11.86□□□□□ -0.51
PTCH2-203ENST00000447098 ZC3H18Q86VM9 953 aaKnown RBP11.86□□□□□ -0.51
PTCH2-203ENST00000447098 BRI3BPQ8WY22 251 aa11.86□□□□□ -0.51
PTCH2-203ENST00000447098 TTC7AQ9ULT0 858 aaPredicted RBP11.86□□□□□ -0.51
PTCH2-203ENST00000447098 HEY1Q9Y5J3 304 aa11.86□□□□□ -0.51
PTCH2-203ENST00000447098 MYH7BA7E2Y1 1941 aa11.85□□□□□ -0.51
PTCH2-203ENST00000447098 ADCY3O60266 1144 aa11.85□□□□□ -0.51
PTCH2-203ENST00000447098 PRKCIP41743 596 aa11.85□□□□□ -0.51
PTCH2-203ENST00000447098 KRT17Q04695 432 aa11.85□□□□□ -0.51
PTCH2-203ENST00000447098 RASIP1Q5U651 963 aa11.85□□□□□ -0.51
PTCH2-203ENST00000447098 NOTUMQ6P988 496 aa11.85□□□□□ -0.51
PTCH2-203ENST00000447098 MPZL3Q6UWV2 235 aa11.85□□□□□ -0.51
PTCH2-203ENST00000447098 AGGF1Q8N302 714 aaeCLIP11.85□□□□□ -0.51
PTCH2-203ENST00000447098 DNAJC9Q8WXX5 260 aa11.85□□□□□ -0.51
PTCH2-203ENST00000447098 ACSF2Q96CM8 615 aaPredicted RBP11.85□□□□□ -0.51
PTCH2-203ENST00000447098 TRIM17Q9Y577 477 aa11.85□□□□□ -0.51
PTCH2-203ENST00000447098 LTBP3Q9NS15 1303 aa11.85□□□□□ -0.51
PTCH2-203ENST00000447098 B4GALT5O43286 388 aa11.85□□□□□ -0.51
PTCH2-203ENST00000447098 FARP2O94887 1054 aaPredicted RBP11.85□□□□□ -0.51
PTCH2-203ENST00000447098 PAPOLAP51003 745 aaKnown RBP11.85□□□□□ -0.51
PTCH2-203ENST00000447098 GPAT2Q6NUI2 795 aa11.85□□□□□ -0.51
PTCH2-203ENST00000447098 RNF180Q86T96 592 aa11.85□□□□□ -0.51
PTCH2-203ENST00000447098 SLC47A2Q86VL8 602 aa11.85□□□□□ -0.51
PTCH2-203ENST00000447098 GRK7Q8WTQ7 553 aa11.85□□□□□ -0.51
PTCH2-203ENST00000447098 SERPINB12Q96P63 405 aa11.85□□□□□ -0.51
PTCH2-203ENST00000447098 SNTG2Q9NY99 539 aa11.85□□□□□ -0.51
PTCH2-203ENST00000447098 STOML1Q9UBI4 398 aa11.85□□□□□ -0.51
PTCH2-203ENST00000447098 TROVE2P10155 538 aaKnown RBP eCLIP11.85□□□□□ -0.51
PTCH2-203ENST00000447098 COMTP21964 271 aa11.85□□□□□ -0.51
PTCH2-203ENST00000447098 COILP38432 576 aaPredicted RBP11.85□□□□□ -0.51
PTCH2-203ENST00000447098 FLT3LGP49771 235 aa11.85□□□□□ -0.51
PTCH2-203ENST00000447098 DEFB115Q30KQ5 88 aa11.85□□□□□ -0.51
PTCH2-203ENST00000447098 ARHGEF19Q8IW93 802 aa11.85□□□□□ -0.51
PTCH2-203ENST00000447098 ARHGEF26Q96DR7 871 aa11.85□□□□□ -0.51
PTCH2-203ENST00000447098 TMEM237Q96Q45 408 aa11.85□□□□□ -0.51
PTCH2-203ENST00000447098 SMC6Q96SB8 1091 aa11.85□□□□□ -0.51
PTCH2-203ENST00000447098 NIF3L1Q9GZT8 377 aa11.85□□□□□ -0.51
PTCH2-203ENST00000447098 XPNPEP3Q9NQH7 507 aa11.85□□□□□ -0.51
PTCH2-203ENST00000447098 MYPNQ86TC9 1320 aa11.84□□□□□ -0.51
PTCH2-203ENST00000447098 EXOC1LA0A1B0GW35 172 aa11.84□□□□□ -0.51
PTCH2-203ENST00000447098 ADRB2P07550 413 aa11.84□□□□□ -0.51
PTCH2-203ENST00000447098 KCNA2P16389 499 aa11.84□□□□□ -0.51
PTCH2-203ENST00000447098 ATP4AP20648 1035 aa11.84□□□□□ -0.51
PTCH2-203ENST00000447098 CA4P22748 312 aa11.84□□□□□ -0.51
PTCH2-203ENST00000447098 CDH8P55286 799 aa11.84□□□□□ -0.51
PTCH2-203ENST00000447098 ITKQ08881 620 aa11.84□□□□□ -0.51
PTCH2-203ENST00000447098 FSCN1Q16658 493 aaKnown RBP11.84□□□□□ -0.51
PTCH2-203ENST00000447098 KIAA0319LQ8IZA0 1049 aa11.84□□□□□ -0.51
PTCH2-203ENST00000447098 TMEM161BQ8NDZ6 487 aa11.84□□□□□ -0.51
PTCH2-203ENST00000447098 L3MBTL3Q96JM7 780 aaPredicted RBP11.84□□□□□ -0.51
PTCH2-203ENST00000447098 TGFB1I1O43294 461 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms