RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 RNF25Q96BH1 459 aaPredicted RBP18.45■□□□□ 0.54
SMC6-206ENST00000446852 KATNAL1Q9BW62 490 aa18.45■□□□□ 0.54
SMC6-206ENST00000446852 TXLNGYQ9BZA5 131 aa18.45■□□□□ 0.54
SMC6-206ENST00000446852 OSBPL8Q9BZF1 889 aa18.45■□□□□ 0.54
SMC6-206ENST00000446852 ARHGAP39Q9C0H5 1083 aa18.45■□□□□ 0.54
SMC6-206ENST00000446852 GOLGA6AQ9NYA3 693 aa18.45■□□□□ 0.54
SMC6-206ENST00000446852 CNTN3Q9P232 1028 aa18.45■□□□□ 0.54
SMC6-206ENST00000446852 BRCA2P51587 3418 aa18.44■□□□□ 0.54
SMC6-206ENST00000446852 PI4K2BG5E9Z4 385 aa18.44■□□□□ 0.54
SMC6-206ENST00000446852 H0YGN5 161 aa18.44■□□□□ 0.54
SMC6-206ENST00000446852 ECEL1O95672 775 aa18.44■□□□□ 0.54
SMC6-206ENST00000446852 GPD2P43304 727 aa18.44■□□□□ 0.54
SMC6-206ENST00000446852 CNGA2Q16280 664 aa18.44■□□□□ 0.54
SMC6-206ENST00000446852 MAIP1Q8WWC4 291 aa18.44■□□□□ 0.54
SMC6-206ENST00000446852 DCLK3Q9C098 648 aa18.44■□□□□ 0.54
SMC6-206ENST00000446852 PSD3Q9NYI0 1048 aa18.44■□□□□ 0.54
SMC6-206ENST00000446852 NFS1Q9Y697 457 aa18.44■□□□□ 0.54
SMC6-206ENST00000446852 TLL2Q9Y6L7 1015 aa18.44■□□□□ 0.54
SMC6-206ENST00000446852 SIGLEC16A6NMB1 481 aa18.44■□□□□ 0.54
SMC6-206ENST00000446852 HMGCRP04035 888 aa18.44■□□□□ 0.54
SMC6-206ENST00000446852 AXLP30530 894 aa18.44■□□□□ 0.54
SMC6-206ENST00000446852 ADCY2Q08462 1091 aa18.44■□□□□ 0.54
SMC6-206ENST00000446852 PDCLQ13371 301 aa18.44■□□□□ 0.54
SMC6-206ENST00000446852 PIGHQ14442 188 aaPredicted RBP18.44■□□□□ 0.54
SMC6-206ENST00000446852 UBXN11Q5T124 520 aa18.44■□□□□ 0.54
SMC6-206ENST00000446852 C7orf31Q8N865 590 aa18.44■□□□□ 0.54
SMC6-206ENST00000446852 UBA3Q8TBC4 463 aa18.44■□□□□ 0.54
SMC6-206ENST00000446852 MRPL45Q9BRJ2 306 aaKnown RBP18.44■□□□□ 0.54
SMC6-206ENST00000446852 NME7Q9Y5B8 376 aa18.44■□□□□ 0.54
SMC6-206ENST00000446852 SNX9Q9Y5X1 595 aa18.44■□□□□ 0.54
SMC6-206ENST00000446852 CEP350Q5VT06 3117 aa18.44■□□□□ 0.54
SMC6-206ENST00000446852 PPFIA2O75334 1257 aa18.43■□□□□ 0.54
SMC6-206ENST00000446852 C6orf222P0C671 652 aaPredicted RBP18.43■□□□□ 0.54
SMC6-206ENST00000446852 KRT3P12035 628 aa18.43■□□□□ 0.54
SMC6-206ENST00000446852 LMAN1P49257 510 aa18.43■□□□□ 0.54
SMC6-206ENST00000446852 GSCP56915 257 aaPredicted RBP18.43■□□□□ 0.54
SMC6-206ENST00000446852 SREBF2Q12772 1141 aa18.43■□□□□ 0.54
SMC6-206ENST00000446852 C12orf29Q8N999 325 aa18.43■□□□□ 0.54
SMC6-206ENST00000446852 OR2W6PQ8NHA6 318 aa18.43■□□□□ 0.54
SMC6-206ENST00000446852 UBLCP1Q8WVY7 318 aaPredicted RBP18.43■□□□□ 0.54
SMC6-206ENST00000446852 ACSF2Q96CM8 615 aaPredicted RBP18.43■□□□□ 0.54
SMC6-206ENST00000446852 FAM118BQ9BPY3 351 aa18.43■□□□□ 0.54
SMC6-206ENST00000446852 NT5C1AQ9BXI3 368 aa18.43■□□□□ 0.54
SMC6-206ENST00000446852 RNF39Q9H2S5 420 aa18.43■□□□□ 0.54
SMC6-206ENST00000446852 FAM124BQ9H5Z6 455 aaPredicted RBP18.43■□□□□ 0.54
SMC6-206ENST00000446852 LCMT1Q9UIC8 334 aa18.43■□□□□ 0.54
SMC6-206ENST00000446852 KRT17Q04695 432 aa18.43■□□□□ 0.54
SMC6-206ENST00000446852 NFX1Q12986 1120 aaKnown RBP18.43■□□□□ 0.54
SMC6-206ENST00000446852 LRRC38Q5VT99 294 aa18.43■□□□□ 0.54
SMC6-206ENST00000446852 EMC1Q8N766 993 aa18.43■□□□□ 0.54
SMC6-206ENST00000446852 SLITRK1Q96PX8 696 aa18.43■□□□□ 0.54
SMC6-206ENST00000446852 SYNCQ9H7C4 482 aa18.43■□□□□ 0.54
SMC6-206ENST00000446852 METTL5Q9NRN9 209 aaKnown RBP18.43■□□□□ 0.54
SMC6-206ENST00000446852 KLK14Q9P0G3 267 aa18.43■□□□□ 0.54
SMC6-206ENST00000446852 DUSP11O75319 330 aaKnown RBP18.42■□□□□ 0.54
SMC6-206ENST00000446852 KRT1P04264 644 aa18.42■□□□□ 0.54
SMC6-206ENST00000446852 GABRB2P47870 512 aa18.42■□□□□ 0.54
SMC6-206ENST00000446852 CRYBB1P53674 252 aaPredicted RBP18.42■□□□□ 0.54
SMC6-206ENST00000446852 PPP1R7Q15435 360 aa18.42■□□□□ 0.54
SMC6-206ENST00000446852 ARFGAP1Q8N6T3 406 aa18.42■□□□□ 0.54
SMC6-206ENST00000446852 BEST2Q8NFU1 509 aa18.42■□□□□ 0.54
SMC6-206ENST00000446852 TRIB2Q92519 343 aa18.42■□□□□ 0.54
SMC6-206ENST00000446852 TSPAN16Q9UKR8 245 aa18.42■□□□□ 0.54
SMC6-206ENST00000446852 ATP8A1Q9Y2Q0 1164 aa18.42■□□□□ 0.54
SMC6-206ENST00000446852 CYBAP13498 195 aa18.42■□□□□ 0.54
SMC6-206ENST00000446852 KRT10P13645 584 aa18.42■□□□□ 0.54
SMC6-206ENST00000446852 PSMA2P25787 234 aa18.42■□□□□ 0.54
SMC6-206ENST00000446852 MTMR3Q13615 1198 aa18.42■□□□□ 0.54
SMC6-206ENST00000446852 C9orf57Q5W0N0 161 aa18.42■□□□□ 0.54
SMC6-206ENST00000446852 LCLAT1Q6UWP7 414 aa18.42■□□□□ 0.54
SMC6-206ENST00000446852 MFSD7Q6UXD7 560 aa18.42■□□□□ 0.54
SMC6-206ENST00000446852 TTC39CQ8N584 583 aa18.42■□□□□ 0.54
SMC6-206ENST00000446852 LRRC52Q8N7C0 313 aa18.42■□□□□ 0.54
SMC6-206ENST00000446852 FAM76AQ8TAV0 307 aa18.42■□□□□ 0.54
SMC6-206ENST00000446852 GABRQQ9UN88 632 aa18.42■□□□□ 0.54
SMC6-206ENST00000446852 SMIM28A0A1B0GU29 152 aa18.41■□□□□ 0.54
SMC6-206ENST00000446852 TP73O15350 636 aa18.41■□□□□ 0.54
SMC6-206ENST00000446852 PFKMP08237 780 aa18.41■□□□□ 0.54
SMC6-206ENST00000446852 ZNF268Q14587 947 aaPredicted RBP18.41■□□□□ 0.54
SMC6-206ENST00000446852 CEP85LQ5SZL2 805 aa18.41■□□□□ 0.54
SMC6-206ENST00000446852 KCTD16Q68DU8 428 aa18.41■□□□□ 0.54
SMC6-206ENST00000446852 LRIG3Q6UXM1 1119 aa18.41■□□□□ 0.54
SMC6-206ENST00000446852 RCOR2Q8IZ40 523 aa18.41■□□□□ 0.54
SMC6-206ENST00000446852 SH2D3CQ8N5H7 860 aa18.41■□□□□ 0.54
SMC6-206ENST00000446852 MCRS1Q96EZ8 462 aa18.41■□□□□ 0.54
SMC6-206ENST00000446852 RBM41Q96IZ5 413 aaKnown RBP18.41■□□□□ 0.54
SMC6-206ENST00000446852 WDR35Q9P2L0 1181 aa18.41■□□□□ 0.54
SMC6-206ENST00000446852 CA12O43570 354 aa18.41■□□□□ 0.54
SMC6-206ENST00000446852 LRCH4O75427 683 aa18.41■□□□□ 0.54
SMC6-206ENST00000446852 GNAT1P11488 350 aa18.41■□□□□ 0.54
SMC6-206ENST00000446852 GBP1P32455 592 aa18.41■□□□□ 0.54
SMC6-206ENST00000446852 TM4SF4P48230 202 aa18.41■□□□□ 0.54
SMC6-206ENST00000446852 SLC25A11Q02978 314 aaKnown RBP18.41■□□□□ 0.54
SMC6-206ENST00000446852 ZNF844Q08AG5 666 aa18.41■□□□□ 0.54
SMC6-206ENST00000446852 GNASQ5JWF2 1037 aa18.41■□□□□ 0.54
SMC6-206ENST00000446852 ZFYVE27Q5T4F4 411 aa18.41■□□□□ 0.54
SMC6-206ENST00000446852 FNIP1Q8TF40 1166 aa18.41■□□□□ 0.54
SMC6-206ENST00000446852 RAPGEF5Q92565 580 aa18.41■□□□□ 0.54
SMC6-206ENST00000446852 ART4Q93070 314 aa18.41■□□□□ 0.54
SMC6-206ENST00000446852 EPB41L4BQ9H329 900 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms