RNA–Protein interactions for RNA: ENST00000446851.6

LIN54-203, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-203ENST00000446851 NFE2Q16621 373 aaPredicted RBP10.93□□□□□ -0.66
LIN54-203ENST00000446851 PHLDB3Q6NSJ2 640 aa10.93□□□□□ -0.66
LIN54-203ENST00000446851 RNF19BQ6ZMZ0 732 aa10.93□□□□□ -0.66
LIN54-203ENST00000446851 B3GALNT2Q8NCR0 500 aa10.93□□□□□ -0.66
LIN54-203ENST00000446851 MAFAQ8NHW3 353 aaPredicted RBP10.93□□□□□ -0.66
LIN54-203ENST00000446851 SAMD11Q96NU1 681 aa10.93□□□□□ -0.66
LIN54-203ENST00000446851 ZNF518BQ9C0D4 1074 aa10.93□□□□□ -0.66
LIN54-203ENST00000446851 PRDM6Q9NQX0 595 aa10.93□□□□□ -0.66
LIN54-203ENST00000446851 MYO1AQ9UBC5 1043 aa10.93□□□□□ -0.66
LIN54-203ENST00000446851 PIRO00625 290 aa10.93□□□□□ -0.66
LIN54-203ENST00000446851 DPYSL4O14531 572 aa10.93□□□□□ -0.66
LIN54-203ENST00000446851 CTSAP10619 480 aa10.93□□□□□ -0.66
LIN54-203ENST00000446851 CYP3A5P20815 502 aa10.93□□□□□ -0.66
LIN54-203ENST00000446851 ATICP31939 592 aa10.93□□□□□ -0.66
LIN54-203ENST00000446851 GPR15P49685 360 aa10.93□□□□□ -0.66
LIN54-203ENST00000446851 NTHL1P78549 312 aa10.93□□□□□ -0.66
LIN54-203ENST00000446851 GOLGA7BQ2TAP0 167 aa10.93□□□□□ -0.66
LIN54-203ENST00000446851 SFMBT2Q5VUG0 894 aa10.93□□□□□ -0.66
LIN54-203ENST00000446851 DNAAF5Q86Y56 855 aa10.93□□□□□ -0.66
LIN54-203ENST00000446851 GOLGA1Q92805 767 aa10.93□□□□□ -0.66
LIN54-203ENST00000446851 NOX5Q96PH1 765 aa10.93□□□□□ -0.66
LIN54-203ENST00000446851 KCNK16Q96T55 309 aa10.93□□□□□ -0.66
LIN54-203ENST00000446851 MRPS23Q9Y3D9 190 aaKnown RBP10.93□□□□□ -0.66
LIN54-203ENST00000446851 PTPRZ1P23471 2315 aaPredicted RBP10.93□□□□□ -0.66
LIN54-203ENST00000446851 TGM5O43548 720 aa10.93□□□□□ -0.66
LIN54-203ENST00000446851 CKMP06732 381 aa10.93□□□□□ -0.66
LIN54-203ENST00000446851 FAM200BP0CF97 657 aa10.93□□□□□ -0.66
LIN54-203ENST00000446851 OR6B2Q6IFH4 312 aa10.93□□□□□ -0.66
LIN54-203ENST00000446851 GRASPQ7Z6J2 395 aaPredicted RBP10.93□□□□□ -0.66
LIN54-203ENST00000446851 OSTM1Q86WC4 334 aa10.93□□□□□ -0.66
LIN54-203ENST00000446851 OR10T2Q8NGX3 314 aa10.93□□□□□ -0.66
LIN54-203ENST00000446851 PCDHB8Q9UN66 801 aa10.93□□□□□ -0.66
LIN54-203ENST00000446851 LOXHD1Q8IVV2 1947 aa10.92□□□□□ -0.66
LIN54-203ENST00000446851 IRF1P10914 325 aa10.92□□□□□ -0.66
LIN54-203ENST00000446851 PTPN14Q15678 1187 aa10.92□□□□□ -0.66
LIN54-203ENST00000446851 ATAT1Q5SQI0 421 aa10.92□□□□□ -0.66
LIN54-203ENST00000446851 ALKAL1Q6UXT8 129 aa10.92□□□□□ -0.66
LIN54-203ENST00000446851 SLC30A5Q8TAD4 765 aa10.92□□□□□ -0.66
LIN54-203ENST00000446851 MRPL38Q96DV4 380 aaKnown RBP10.92□□□□□ -0.66
LIN54-203ENST00000446851 TRIM44Q96DX7 344 aaPredicted RBP10.92□□□□□ -0.66
LIN54-203ENST00000446851 PLVAPQ9BX97 442 aa10.92□□□□□ -0.66
LIN54-203ENST00000446851 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.92□□□□□ -0.66
LIN54-203ENST00000446851 MTMR3Q13615 1198 aa10.92□□□□□ -0.66
LIN54-203ENST00000446851 MIB1Q86YT6 1006 aa10.92□□□□□ -0.66
LIN54-203ENST00000446851 MCRS1Q96EZ8 462 aa10.92□□□□□ -0.66
LIN54-203ENST00000446851 PCED1BQ96HM7 432 aa10.92□□□□□ -0.66
LIN54-203ENST00000446851 TMEM176AQ96HP8 235 aa10.92□□□□□ -0.66
LIN54-203ENST00000446851 TWNKQ96RR1 684 aa10.92□□□□□ -0.66
LIN54-203ENST00000446851 UNC80Q8N2C7 3258 aa10.92□□□□□ -0.66
LIN54-203ENST00000446851 SYN3O14994 580 aa10.92□□□□□ -0.66
LIN54-203ENST00000446851 CCDC172P0C7W6 258 aa10.92□□□□□ -0.66
LIN54-203ENST00000446851 ODF2Q5BJF6 829 aa10.92□□□□□ -0.66
LIN54-203ENST00000446851 NAGPAQ9UK23 515 aa10.92□□□□□ -0.66
LIN54-203ENST00000446851 C2orf71A6NGG8 1288 aa10.91□□□□□ -0.66
LIN54-203ENST00000446851 LRRC53A6NM62 1247 aa10.91□□□□□ -0.66
LIN54-203ENST00000446851 TMEM110-MUSTN1A8MSY1 372 aa10.91□□□□□ -0.66
LIN54-203ENST00000446851 LRPAP1P30533 357 aa10.91□□□□□ -0.66
LIN54-203ENST00000446851 C1orf220Q5T0J3 134 aa10.91□□□□□ -0.66
LIN54-203ENST00000446851 SPECC1LQ69YQ0 1117 aa10.91□□□□□ -0.66
LIN54-203ENST00000446851 PDZD4Q76G19 769 aaPredicted RBP10.91□□□□□ -0.66
LIN54-203ENST00000446851 SLC47A2Q86VL8 602 aa10.91□□□□□ -0.66
LIN54-203ENST00000446851 CPA5Q8WXQ8 436 aa10.91□□□□□ -0.66
LIN54-203ENST00000446851 KLHL5Q96PQ7 755 aa10.91□□□□□ -0.66
LIN54-203ENST00000446851 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.91□□□□□ -0.66
LIN54-203ENST00000446851 ATP8B3O60423 1300 aa10.91□□□□□ -0.66
LIN54-203ENST00000446851 WDR27A2RRH5 827 aa10.91□□□□□ -0.66
LIN54-203ENST00000446851 EPHB6O15197 1021 aa10.91□□□□□ -0.66
LIN54-203ENST00000446851 XYLBO75191 536 aa10.91□□□□□ -0.66
LIN54-203ENST00000446851 KLHDC7AQ5VTJ3 777 aa10.91□□□□□ -0.66
LIN54-203ENST00000446851 TMEM86AQ8N2M4 240 aa10.91□□□□□ -0.66
LIN54-203ENST00000446851 TTC8Q8TAM2 541 aa10.91□□□□□ -0.66
LIN54-203ENST00000446851 LNX1Q8TBB1 728 aaPredicted RBP10.91□□□□□ -0.66
LIN54-203ENST00000446851 CLP1Q92989 425 aaKnown RBP10.91□□□□□ -0.66
LIN54-203ENST00000446851 CCDC42Q96M95 316 aa10.91□□□□□ -0.66
LIN54-203ENST00000446851 CLSTN3Q9BQT9 956 aa10.91□□□□□ -0.66
LIN54-203ENST00000446851 TSPAN16Q9UKR8 245 aa10.91□□□□□ -0.66
LIN54-203ENST00000446851 STXBP5LQ9Y2K9 1186 aa10.91□□□□□ -0.66
LIN54-203ENST00000446851 CDKAL1Q5VV42 579 aa10.91□□□□□ -0.66
LIN54-203ENST00000446851 NAA35Q5VZE5 725 aa10.91□□□□□ -0.66
LIN54-203ENST00000446851 RSPO2Q6UXX9 243 aaPredicted RBP10.91□□□□□ -0.66
LIN54-203ENST00000446851 ZNF461Q8TAF7 563 aa10.91□□□□□ -0.66
LIN54-203ENST00000446851 IPO4Q8TEX9 1081 aaKnown RBP10.91□□□□□ -0.66
LIN54-203ENST00000446851 FBXO32Q969P5 355 aa10.91□□□□□ -0.66
LIN54-203ENST00000446851 FUCA2Q9BTY2 467 aa10.91□□□□□ -0.66
LIN54-203ENST00000446851 SDCBP2Q9H190 292 aa10.91□□□□□ -0.66
LIN54-203ENST00000446851 HCFC1R1Q9NWW0 138 aa10.91□□□□□ -0.66
LIN54-203ENST00000446851 VCANP13611 3396 aa10.91□□□□□ -0.66
LIN54-203ENST00000446851 GABRR2P28476 465 aa10.9□□□□□ -0.66
LIN54-203ENST00000446851 NOP2P46087 812 aaKnown RBP10.9□□□□□ -0.66
LIN54-203ENST00000446851 ZBTB6Q15916 424 aa10.9□□□□□ -0.66
LIN54-203ENST00000446851 PPP1R26Q5T8A7 1209 aaPredicted RBP10.9□□□□□ -0.66
LIN54-203ENST00000446851 LRRTM3Q86VH5 581 aa10.9□□□□□ -0.66
LIN54-203ENST00000446851 NDRG1Q92597 394 aaKnown RBP10.9□□□□□ -0.66
LIN54-203ENST00000446851 ZNF830Q96NB3 372 aaPredicted RBP10.9□□□□□ -0.66
LIN54-203ENST00000446851 LIMA1Q9UHB6 759 aaKnown RBP10.9□□□□□ -0.66
LIN54-203ENST00000446851 ADAMTS1Q9UHI8 967 aa10.9□□□□□ -0.66
LIN54-203ENST00000446851 DPP7Q9UHL4 492 aa10.9□□□□□ -0.66
LIN54-203ENST00000446851 FXR1P51114 621 aaKnown RBP eCLIP10.9□□□□□ -0.66
LIN54-203ENST00000446851 MAPRE1Q15691 268 aaKnown RBP10.9□□□□□ -0.66
LIN54-203ENST00000446851 CDO1Q16878 200 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms