RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 ADAMTS3O15072 1205 aa17.4■□□□□ 0.38
TCOF1-206ENST00000445265 SHBGP04278 402 aa17.4■□□□□ 0.38
TCOF1-206ENST00000445265 VCAM1P19320 739 aa17.4■□□□□ 0.38
TCOF1-206ENST00000445265 SEZ6Q53EL9 994 aa17.4■□□□□ 0.38
TCOF1-206ENST00000445265 MTHFD1LQ6UB35 978 aa17.4■□□□□ 0.38
TCOF1-206ENST00000445265 LRRC71Q8N4P6 559 aa17.4■□□□□ 0.38
TCOF1-206ENST00000445265 SLC26A7Q8TE54 656 aa17.4■□□□□ 0.38
TCOF1-206ENST00000445265 ZNF606Q8WXB4 792 aa17.4■□□□□ 0.38
TCOF1-206ENST00000445265 TRIM56Q9BRZ2 755 aaKnown RBP17.4■□□□□ 0.38
TCOF1-206ENST00000445265 CYP4F11Q9HBI6 524 aa17.4■□□□□ 0.38
TCOF1-206ENST00000445265 CHST7Q9NS84 486 aa17.4■□□□□ 0.38
TCOF1-206ENST00000445265 SLC12A6Q9UHW9 1150 aa17.4■□□□□ 0.38
TCOF1-206ENST00000445265 HAO1Q9UJM8 370 aa17.4■□□□□ 0.38
TCOF1-206ENST00000445265 MRPS35P82673 323 aaKnown RBP17.4■□□□□ 0.38
TCOF1-206ENST00000445265 AUHQ13825 339 aaKnown RBP17.4■□□□□ 0.38
TCOF1-206ENST00000445265 SPDYE2Q495Y8 402 aa17.4■□□□□ 0.38
TCOF1-206ENST00000445265 KRT80Q6KB66 452 aa17.4■□□□□ 0.38
TCOF1-206ENST00000445265 AADACL2Q6P093 401 aa17.4■□□□□ 0.38
TCOF1-206ENST00000445265 NDUFAF2Q8N183 169 aa17.4■□□□□ 0.38
TCOF1-206ENST00000445265 ARHGAP18Q8N392 663 aa17.4■□□□□ 0.38
TCOF1-206ENST00000445265 PAFAH2Q99487 392 aa17.4■□□□□ 0.38
TCOF1-206ENST00000445265 MRPL40Q9NQ50 206 aaKnown RBP17.4■□□□□ 0.38
TCOF1-206ENST00000445265 CISHQ9NSE2 258 aa17.4■□□□□ 0.38
TCOF1-206ENST00000445265 RGPD2P0DJD1 1756 aa17.4■□□□□ 0.38
TCOF1-206ENST00000445265 F5H423 210 aaPredicted RBP17.4■□□□□ 0.38
TCOF1-206ENST00000445265 HBP1O60381 514 aa17.4■□□□□ 0.38
TCOF1-206ENST00000445265 RWDD4Q6NW29 188 aaKnown RBP17.4■□□□□ 0.38
TCOF1-206ENST00000445265 ACTL9Q8TC94 416 aa17.4■□□□□ 0.38
TCOF1-206ENST00000445265 GRID1Q9ULK0 1009 aa17.4■□□□□ 0.38
TCOF1-206ENST00000445265 PLIN4Q96Q06 1357 aa17.4■□□□□ 0.38
TCOF1-206ENST00000445265 BACE1P56817 501 aa17.4■□□□□ 0.38
TCOF1-206ENST00000445265 ESRRGP62508 458 aa17.4■□□□□ 0.38
TCOF1-206ENST00000445265 RRP1BQ14684 758 aaKnown RBP17.4■□□□□ 0.38
TCOF1-206ENST00000445265 ANO5Q75V66 913 aa17.4■□□□□ 0.38
TCOF1-206ENST00000445265 RNF139Q8WU17 664 aa17.4■□□□□ 0.38
TCOF1-206ENST00000445265 PGBD4Q96DM1 585 aa17.4■□□□□ 0.38
TCOF1-206ENST00000445265 FAM111AQ96PZ2 611 aa17.4■□□□□ 0.38
TCOF1-206ENST00000445265 XAB2Q9HCS7 855 aaKnown RBP17.4■□□□□ 0.38
TCOF1-206ENST00000445265 MARCOQ9UEW3 520 aaPredicted RBP17.4■□□□□ 0.38
TCOF1-206ENST00000445265 GRAP2O75791 330 aa17.39■□□□□ 0.37
TCOF1-206ENST00000445265 KLHL2O95198 593 aa17.39■□□□□ 0.37
TCOF1-206ENST00000445265 CLK2P49760 499 aaKnown RBP17.39■□□□□ 0.37
TCOF1-206ENST00000445265 CRYMQ14894 314 aa17.39■□□□□ 0.37
TCOF1-206ENST00000445265 Q3C1V9 767 aa17.39■□□□□ 0.37
TCOF1-206ENST00000445265 RFX8Q6ZV50 586 aa17.39■□□□□ 0.37
TCOF1-206ENST00000445265 LRRC57Q8N9N7 239 aa17.39■□□□□ 0.37
TCOF1-206ENST00000445265 SCG3Q8WXD2 468 aaKnown RBP17.39■□□□□ 0.37
TCOF1-206ENST00000445265 ALG3Q92685 438 aa17.39■□□□□ 0.37
TCOF1-206ENST00000445265 MTBPQ96DY7 904 aa17.39■□□□□ 0.37
TCOF1-206ENST00000445265 STAMBPL1Q96FJ0 436 aa17.39■□□□□ 0.37
TCOF1-206ENST00000445265 DONSONQ9NYP3 566 aa17.39■□□□□ 0.37
TCOF1-206ENST00000445265 HEY2Q9UBP5 337 aa17.39■□□□□ 0.37
TCOF1-206ENST00000445265 SCN11AQ9UI33 1791 aa17.39■□□□□ 0.37
TCOF1-206ENST00000445265 EIF4E1BA6NMX2 242 aaKnown RBP17.39■□□□□ 0.37
TCOF1-206ENST00000445265 TRPA1O75762 1119 aa17.39■□□□□ 0.37
TCOF1-206ENST00000445265 ASTE1Q2TB18 679 aaPredicted RBP17.39■□□□□ 0.37
TCOF1-206ENST00000445265 KATNAL2Q8IYT4 538 aa17.39■□□□□ 0.37
TCOF1-206ENST00000445265 OTUD5Q96G74 571 aa17.39■□□□□ 0.37
TCOF1-206ENST00000445265 ANKRD63C9JTQ0 380 aa17.39■□□□□ 0.37
TCOF1-206ENST00000445265 TM9SF1O15321 606 aa17.39■□□□□ 0.37
TCOF1-206ENST00000445265 HSPA8P11142 646 aaKnown RBP17.39■□□□□ 0.37
TCOF1-206ENST00000445265 CNGA2Q16280 664 aa17.39■□□□□ 0.37
TCOF1-206ENST00000445265 PRPF31Q8WWY3 499 aaKnown RBP17.39■□□□□ 0.37
TCOF1-206ENST00000445265 HPDLQ96IR7 371 aa17.39■□□□□ 0.37
TCOF1-206ENST00000445265 LCP1P13796 627 aa17.38■□□□□ 0.37
TCOF1-206ENST00000445265 TCF7P36402 384 aaPredicted RBP17.38■□□□□ 0.37
TCOF1-206ENST00000445265 NBPF20Q3BBV1 942 aa17.38■□□□□ 0.37
TCOF1-206ENST00000445265 FKBP1CQ5VVH2 108 aa17.38■□□□□ 0.37
TCOF1-206ENST00000445265 TATDN1Q6P1N9 297 aa17.38■□□□□ 0.37
TCOF1-206ENST00000445265 ART4Q93070 314 aa17.38■□□□□ 0.37
TCOF1-206ENST00000445265 SCAF8Q9UPN6 1271 aaKnown RBP17.38■□□□□ 0.37
TCOF1-206ENST00000445265 TMEM150BA6NC51 233 aa17.38■□□□□ 0.37
TCOF1-206ENST00000445265 GOLGA8CPA6NN73 597 aa17.38■□□□□ 0.37
TCOF1-206ENST00000445265 SNX3O60493 162 aa17.38■□□□□ 0.37
TCOF1-206ENST00000445265 DRD4P21917 467 aa17.38■□□□□ 0.37
TCOF1-206ENST00000445265 SOX10P56693 466 aa17.38■□□□□ 0.37
TCOF1-206ENST00000445265 OVGP1Q12889 678 aa17.38■□□□□ 0.37
TCOF1-206ENST00000445265 KCNT1Q5JUK3 1230 aa17.38■□□□□ 0.37
TCOF1-206ENST00000445265 RABGAP1LQ5R372 815 aa17.38■□□□□ 0.37
TCOF1-206ENST00000445265 SLC10A4Q96EP9 437 aa17.38■□□□□ 0.37
TCOF1-206ENST00000445265 DUOX1Q9NRD9 1551 aa17.38■□□□□ 0.37
TCOF1-206ENST00000445265 CA8P35219 290 aa17.38■□□□□ 0.37
TCOF1-206ENST00000445265 MARCKSL1P49006 195 aa17.38■□□□□ 0.37
TCOF1-206ENST00000445265 C12orf56Q8IXR9 622 aa17.38■□□□□ 0.37
TCOF1-206ENST00000445265 KIAA1257Q9ULG3 409 aa17.38■□□□□ 0.37
TCOF1-206ENST00000445265 SUFUQ9UMX1 484 aa17.38■□□□□ 0.37
TCOF1-206ENST00000445265 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.38■□□□□ 0.37
TCOF1-206ENST00000445265 MYL6P60660 151 aa17.38■□□□□ 0.37
TCOF1-206ENST00000445265 GRM1Q13255 1194 aa17.38■□□□□ 0.37
TCOF1-206ENST00000445265 EFCAB12Q6NXP0 572 aa17.38■□□□□ 0.37
TCOF1-206ENST00000445265 ARID3BQ8IVW6 561 aaPredicted RBP17.38■□□□□ 0.37
TCOF1-206ENST00000445265 ZCCHC9Q8N567 271 aaKnown RBP17.38■□□□□ 0.37
TCOF1-206ENST00000445265 DCLK2Q8N568 766 aa17.38■□□□□ 0.37
TCOF1-206ENST00000445265 CCNYL1Q8N7R7 359 aa17.38■□□□□ 0.37
TCOF1-206ENST00000445265 UBA3Q8TBC4 463 aa17.38■□□□□ 0.37
TCOF1-206ENST00000445265 PIP4K2CQ8TBX8 421 aa17.38■□□□□ 0.37
TCOF1-206ENST00000445265 CCDC124Q96CT7 223 aaKnown RBP17.38■□□□□ 0.37
TCOF1-206ENST00000445265 SHISA4Q96DD7 197 aa17.38■□□□□ 0.37
TCOF1-206ENST00000445265 OLFM3Q96PB7 478 aa17.38■□□□□ 0.37
TCOF1-206ENST00000445265 FAM193BQ96PV7 902 aaPredicted RBP17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms