RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 ALDH1A3P47895 512 aa25.61■■□□□ 1.69
C9orf3-207ENST00000445181 NLRP12P59046 1061 aa25.61■■□□□ 1.69
C9orf3-207ENST00000445181 PLD1Q13393 1074 aa25.61■■□□□ 1.69
C9orf3-207ENST00000445181 NFE2Q16621 373 aaPredicted RBP25.61■■□□□ 1.69
C9orf3-207ENST00000445181 GET4Q7L5D6 327 aaPredicted RBP25.61■■□□□ 1.69
C9orf3-207ENST00000445181 SRRTQ9BXP5 876 aaKnown RBP25.61■■□□□ 1.69
C9orf3-207ENST00000445181 CRISPLD1Q9H336 500 aa25.61■■□□□ 1.69
C9orf3-207ENST00000445181 SMYD3Q9H7B4 428 aa25.61■■□□□ 1.69
C9orf3-207ENST00000445181 PCDHB5Q9Y5E4 795 aa25.61■■□□□ 1.69
C9orf3-207ENST00000445181 GNA14O95837 355 aa25.6■■□□□ 1.69
C9orf3-207ENST00000445181 ASS1P00966 412 aaKnown RBP25.6■■□□□ 1.69
C9orf3-207ENST00000445181 FAM163BP0C2L3 166 aa25.6■■□□□ 1.69
C9orf3-207ENST00000445181 FSHRP23945 695 aa25.6■■□□□ 1.69
C9orf3-207ENST00000445181 LMO2P25791 158 aa25.6■■□□□ 1.69
C9orf3-207ENST00000445181 MCCD1P59942 119 aaPredicted RBP25.6■■□□□ 1.69
C9orf3-207ENST00000445181 NTHL1P78549 312 aa25.6■■□□□ 1.69
C9orf3-207ENST00000445181 MGAT5BQ3V5L5 792 aa25.6■■□□□ 1.69
C9orf3-207ENST00000445181 PABPC1LQ4VXU2 614 aaKnown RBP25.6■■□□□ 1.69
C9orf3-207ENST00000445181 IER5LQ5T953 404 aa25.6■■□□□ 1.69
C9orf3-207ENST00000445181 IQCEQ6IPM2 695 aa25.6■■□□□ 1.69
C9orf3-207ENST00000445181 SPOPLQ6IQ16 392 aa25.6■■□□□ 1.69
C9orf3-207ENST00000445181 SPPL2BQ8TCT7 592 aa25.6■■□□□ 1.69
C9orf3-207ENST00000445181 ZNF512Q96ME7 567 aaPredicted RBP25.6■■□□□ 1.69
C9orf3-207ENST00000445181 SYT15Q9BQS2 421 aa25.6■■□□□ 1.69
C9orf3-207ENST00000445181 PI4K2AQ9BTU6 479 aa25.6■■□□□ 1.69
C9orf3-207ENST00000445181 HCFC1R1Q9NWW0 138 aa25.6■■□□□ 1.69
C9orf3-207ENST00000445181 GTF3C4Q9UKN8 822 aa25.6■■□□□ 1.69
C9orf3-207ENST00000445181 CDH9Q9ULB4 789 aa25.6■■□□□ 1.69
C9orf3-207ENST00000445181 LAMP2P13473 410 aa25.59■■□□□ 1.69
C9orf3-207ENST00000445181 PTPN2P17706 415 aa25.59■■□□□ 1.69
C9orf3-207ENST00000445181 AVPR2P30518 371 aa25.59■■□□□ 1.69
C9orf3-207ENST00000445181 RAP1GAPP47736 663 aa25.59■■□□□ 1.69
C9orf3-207ENST00000445181 TUFMP49411 452 aaKnown RBP25.59■■□□□ 1.69
C9orf3-207ENST00000445181 EPHB3P54753 998 aa25.59■■□□□ 1.69
C9orf3-207ENST00000445181 VCPP55072 806 aaKnown RBP25.59■■□□□ 1.69
C9orf3-207ENST00000445181 PSMC1P62191 440 aaKnown RBP25.59■■□□□ 1.69
C9orf3-207ENST00000445181 TPD52L1Q16890 204 aaPredicted RBP25.59■■□□□ 1.69
C9orf3-207ENST00000445181 DPCR1Q3MIW9 517 aa25.59■■□□□ 1.69
C9orf3-207ENST00000445181 TTC9BQ8N6N2 239 aa25.59■■□□□ 1.69
C9orf3-207ENST00000445181 FBXL13Q8NEE6 735 aa25.59■■□□□ 1.69
C9orf3-207ENST00000445181 RSAD2Q8WXG1 361 aa25.59■■□□□ 1.69
C9orf3-207ENST00000445181 CORO1BQ9BR76 489 aa25.59■■□□□ 1.69
C9orf3-207ENST00000445181 TMLHEQ9NVH6 421 aa25.59■■□□□ 1.69
C9orf3-207ENST00000445181 DNMT3BQ9UBC3 853 aaKnown RBP25.59■■□□□ 1.69
C9orf3-207ENST00000445181 HSFX1Q9UBD0 423 aa25.59■■□□□ 1.69
C9orf3-207ENST00000445181 ZNF318Q5VUA4 2279 aa25.59■■□□□ 1.69
C9orf3-207ENST00000445181 A8MXQ7 604 aa25.58■■□□□ 1.69
C9orf3-207ENST00000445181 SOAT2O75908 522 aa25.58■■□□□ 1.69
C9orf3-207ENST00000445181 CDH8P55286 799 aa25.58■■□□□ 1.69
C9orf3-207ENST00000445181 CREBRFQ8IUR6 639 aa25.58■■□□□ 1.69
C9orf3-207ENST00000445181 SPATA2LQ8IUW3 424 aaPredicted RBP25.58■■□□□ 1.69
C9orf3-207ENST00000445181 FAM200AQ8TCP9 573 aa25.58■■□□□ 1.69
C9orf3-207ENST00000445181 RHOP08100 348 aa25.57■■□□□ 1.68
C9orf3-207ENST00000445181 CCDC192P0DO97 292 aa25.57■■□□□ 1.68
C9orf3-207ENST00000445181 NOP14P78316 857 aaKnown RBP25.57■■□□□ 1.68
C9orf3-207ENST00000445181 MAPRE1Q15691 268 aaKnown RBP25.57■■□□□ 1.68
C9orf3-207ENST00000445181 CBWD6Q4V339 395 aa25.57■■□□□ 1.68
C9orf3-207ENST00000445181 CBWD3Q5JTY5 395 aa25.57■■□□□ 1.68
C9orf3-207ENST00000445181 CBWD5Q5RIA9 395 aa25.57■■□□□ 1.68
C9orf3-207ENST00000445181 CCDC183Q5T5S1 534 aa25.57■■□□□ 1.68
C9orf3-207ENST00000445181 SLC35C1Q96A29 364 aa25.57■■□□□ 1.68
C9orf3-207ENST00000445181 RAB20Q9NX57 234 aa25.57■■□□□ 1.68
C9orf3-207ENST00000445181 CEP72Q9P209 647 aa25.57■■□□□ 1.68
C9orf3-207ENST00000445181 DUSP12Q9UNI6 340 aa25.57■■□□□ 1.68
C9orf3-207ENST00000445181 MYBPHLA2RUH7 354 aa25.56■■□□□ 1.68
C9orf3-207ENST00000445181 ATP2C2O75185 946 aa25.56■■□□□ 1.68
C9orf3-207ENST00000445181 WDR44Q5JSH3 913 aa25.56■■□□□ 1.68
C9orf3-207ENST00000445181 CYP4A22Q5TCH4 519 aa25.56■■□□□ 1.68
C9orf3-207ENST00000445181 C4orf50Q6ZRC1 276 aa25.56■■□□□ 1.68
C9orf3-207ENST00000445181 SLC44A3Q8N4M1 653 aa25.56■■□□□ 1.68
C9orf3-207ENST00000445181 NXPE3Q969Y0 559 aa25.56■■□□□ 1.68
C9orf3-207ENST00000445181 MRPS23Q9Y3D9 190 aaKnown RBP25.56■■□□□ 1.68
C9orf3-207ENST00000445181 ZFP37Q9Y6Q3 630 aaPredicted RBP25.56■■□□□ 1.68
C9orf3-207ENST00000445181 DOCK6Q96HP0 2047 aa25.56■■□□□ 1.68
C9orf3-207ENST00000445181 MUC6Q6W4X9 2439 aa25.55■■□□□ 1.68
C9orf3-207ENST00000445181 HAPLN1P10915 354 aaPredicted RBP25.55■■□□□ 1.68
C9orf3-207ENST00000445181 ASPAP45381 313 aa25.55■■□□□ 1.68
C9orf3-207ENST00000445181 CYP27A1Q02318 531 aa25.55■■□□□ 1.68
C9orf3-207ENST00000445181 VEPH1Q14D04 833 aa25.55■■□□□ 1.68
C9orf3-207ENST00000445181 CCDC142Q17RM4 750 aa25.55■■□□□ 1.68
C9orf3-207ENST00000445181 FAM171BQ6P995 826 aa25.55■■□□□ 1.68
C9orf3-207ENST00000445181 SASS6Q6UVJ0 657 aa25.55■■□□□ 1.68
C9orf3-207ENST00000445181 PDZD4Q76G19 769 aaPredicted RBP25.55■■□□□ 1.68
C9orf3-207ENST00000445181 PRSS33Q8NF86 280 aa25.55■■□□□ 1.68
C9orf3-207ENST00000445181 SEMA4DQ92854 862 aa25.55■■□□□ 1.68
C9orf3-207ENST00000445181 PKMYT1Q99640 499 aa25.55■■□□□ 1.68
C9orf3-207ENST00000445181 PRRX2Q99811 253 aa25.55■■□□□ 1.68
C9orf3-207ENST00000445181 NIF3L1Q9GZT8 377 aa25.55■■□□□ 1.68
C9orf3-207ENST00000445181 SDCBP2Q9H190 292 aa25.55■■□□□ 1.68
C9orf3-207ENST00000445181 MFSD1Q9H3U5 465 aa25.55■■□□□ 1.68
C9orf3-207ENST00000445181 APOBEC3GQ9HC16 384 aaKnown RBP25.55■■□□□ 1.68
C9orf3-207ENST00000445181 ASAH2Q9NR71 780 aa25.55■■□□□ 1.68
C9orf3-207ENST00000445181 CDH7Q9ULB5 785 aa25.55■■□□□ 1.68
C9orf3-207ENST00000445181 NARSO43776 548 aaKnown RBP25.54■■□□□ 1.68
C9orf3-207ENST00000445181 CYP2F1P24903 491 aa25.54■■□□□ 1.68
C9orf3-207ENST00000445181 ERCC5P28715 1186 aaPredicted RBP25.54■■□□□ 1.68
C9orf3-207ENST00000445181 FMO5P49326 533 aa25.54■■□□□ 1.68
C9orf3-207ENST00000445181 NHLH1Q02575 133 aa25.54■■□□□ 1.68
C9orf3-207ENST00000445181 TAF12Q16514 161 aa25.54■■□□□ 1.68
C9orf3-207ENST00000445181 MDH1BQ5I0G3 518 aa25.54■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms