RNA–Protein interactions for RNA: ENST00000445064.1

SEC13-213, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 669 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-213ENST00000445064 PRR23BQ6ZRT6 265 aa16.62■□□□□ 0.25
SEC13-213ENST00000445064 PDCL2Q8N4E4 241 aa16.62■□□□□ 0.25
SEC13-213ENST00000445064 CBWD1Q9BRT8 395 aa16.62■□□□□ 0.25
SEC13-213ENST00000445064 PDE11AQ9HCR9 933 aa16.62■□□□□ 0.25
SEC13-213ENST00000445064 PARD6AQ9NPB6 346 aa16.62■□□□□ 0.25
SEC13-213ENST00000445064 FOXD4L1Q9NU39 408 aa16.62■□□□□ 0.25
SEC13-213ENST00000445064 C2orf42Q9NWW7 574 aa16.62■□□□□ 0.25
SEC13-213ENST00000445064 DDX43Q9NXZ2 648 aaKnown RBP16.62■□□□□ 0.25
SEC13-213ENST00000445064 GMEB2Q9UKD1 530 aa16.62■□□□□ 0.25
SEC13-213ENST00000445064 GTF3C4Q9UKN8 822 aa16.62■□□□□ 0.25
SEC13-213ENST00000445064 L1RE1Q9UN81 338 aa16.62■□□□□ 0.25
SEC13-213ENST00000445064 CCL26Q9Y258 94 aa16.62■□□□□ 0.25
SEC13-213ENST00000445064 NUP210Q8TEM1 1887 aaPredicted RBP16.62■□□□□ 0.25
SEC13-213ENST00000445064 DMXL1Q9Y485 3027 aa16.62■□□□□ 0.25
SEC13-213ENST00000445064 OTOGLQ3ZCN5 2332 aa16.61■□□□□ 0.25
SEC13-213ENST00000445064 K7ESF4 209 aa16.61■□□□□ 0.25
SEC13-213ENST00000445064 HUS1O60921 280 aa16.61■□□□□ 0.25
SEC13-213ENST00000445064 KRT19P08727 400 aa16.61■□□□□ 0.25
SEC13-213ENST00000445064 PLCB2Q00722 1185 aa16.61■□□□□ 0.25
SEC13-213ENST00000445064 TSPY1Q01534 308 aa16.61■□□□□ 0.25
SEC13-213ENST00000445064 SPEM2Q0P670 501 aa16.61■□□□□ 0.25
SEC13-213ENST00000445064 BFSP1Q12934 665 aa16.61■□□□□ 0.25
SEC13-213ENST00000445064 SRSF5Q13243 272 aaKnown RBP16.61■□□□□ 0.25
SEC13-213ENST00000445064 SIM2Q14190 667 aaPredicted RBP16.61■□□□□ 0.25
SEC13-213ENST00000445064 ITPRIPL2Q3MIP1 535 aa16.61■□□□□ 0.25
SEC13-213ENST00000445064 TXNDC8Q6A555 127 aa16.61■□□□□ 0.25
SEC13-213ENST00000445064 PDILTQ8N807 584 aa16.61■□□□□ 0.25
SEC13-213ENST00000445064 CXorf38Q8TB03 319 aa16.61■□□□□ 0.25
SEC13-213ENST00000445064 USP13Q92995 863 aaPredicted RBP16.61■□□□□ 0.25
SEC13-213ENST00000445064 ACBD6Q9BR61 282 aa16.61■□□□□ 0.25
SEC13-213ENST00000445064 KIF26AQ9ULI4 1882 aaPredicted RBP16.61■□□□□ 0.25
SEC13-213ENST00000445064 F5P12259 2224 aa16.6■□□□□ 0.25
SEC13-213ENST00000445064 FRMD3A2A2Y4 597 aa16.6■□□□□ 0.25
SEC13-213ENST00000445064 EXTL3O43909 919 aa16.6■□□□□ 0.25
SEC13-213ENST00000445064 CSH1P0DML2 217 aa16.6■□□□□ 0.25
SEC13-213ENST00000445064 CSH2P0DML3 217 aa16.6■□□□□ 0.25
SEC13-213ENST00000445064 CYP2F1P24903 491 aa16.6■□□□□ 0.25
SEC13-213ENST00000445064 AVPR1AP37288 418 aa16.6■□□□□ 0.25
SEC13-213ENST00000445064 ATXN1P54253 815 aaKnown RBP16.6■□□□□ 0.25
SEC13-213ENST00000445064 RUNX3Q13761 415 aa16.6■□□□□ 0.25
SEC13-213ENST00000445064 CCINQ13939 588 aa16.6■□□□□ 0.25
SEC13-213ENST00000445064 NFE2Q16621 373 aaPredicted RBP16.6■□□□□ 0.25
SEC13-213ENST00000445064 TRIM68Q6AZZ1 485 aa16.6■□□□□ 0.25
SEC13-213ENST00000445064 OSTM1Q86WC4 334 aa16.6■□□□□ 0.25
SEC13-213ENST00000445064 LRRC52Q8N7C0 313 aa16.6■□□□□ 0.25
SEC13-213ENST00000445064 FAM83CQ9BQN1 747 aa16.6■□□□□ 0.25
SEC13-213ENST00000445064 TDP1Q9NUW8 608 aa16.6■□□□□ 0.25
SEC13-213ENST00000445064 MTMR6Q9Y217 621 aa16.6■□□□□ 0.25
SEC13-213ENST00000445064 SNX9Q9Y5X1 595 aa16.6■□□□□ 0.25
SEC13-213ENST00000445064 OTOL1A6NHN0 477 aaPredicted RBP16.59■□□□□ 0.25
SEC13-213ENST00000445064 PRR5-ARHGAP8B1AHC4 643 aa16.59■□□□□ 0.25
SEC13-213ENST00000445064 HCRTO43612 131 aa16.59■□□□□ 0.25
SEC13-213ENST00000445064 RPL10AP62906 217 aaKnown RBP16.59■□□□□ 0.25
SEC13-213ENST00000445064 RBP5P82980 135 aa16.59■□□□□ 0.25
SEC13-213ENST00000445064 ARHGAP8P85298 464 aa16.59■□□□□ 0.25
SEC13-213ENST00000445064 MYL7Q01449 175 aa16.59■□□□□ 0.25
SEC13-213ENST00000445064 ALCAMQ13740 583 aa16.59■□□□□ 0.25
SEC13-213ENST00000445064 CCDC142Q17RM4 750 aa16.59■□□□□ 0.25
SEC13-213ENST00000445064 INTS6LQ5JSJ4 861 aaKnown RBP16.59■□□□□ 0.25
SEC13-213ENST00000445064 LMBRD2Q68DH5 695 aaPredicted RBP16.59■□□□□ 0.25
SEC13-213ENST00000445064 LAIR1Q6GTX8 287 aa16.59■□□□□ 0.25
SEC13-213ENST00000445064 LONP2Q86WA8 852 aa16.59■□□□□ 0.25
SEC13-213ENST00000445064 CCDC65Q8IXS2 484 aa16.59■□□□□ 0.25
SEC13-213ENST00000445064 TMEM86AQ8N2M4 240 aa16.59■□□□□ 0.25
SEC13-213ENST00000445064 GPD1LQ8N335 351 aa16.59■□□□□ 0.25
SEC13-213ENST00000445064 GLIS3Q8NEA6 775 aa16.59■□□□□ 0.25
SEC13-213ENST00000445064 RIN3Q8TB24 985 aa16.59■□□□□ 0.25
SEC13-213ENST00000445064 MRPS31Q92665 395 aaKnown RBP16.59■□□□□ 0.25
SEC13-213ENST00000445064 HPS3Q969F9 1004 aa16.59■□□□□ 0.25
SEC13-213ENST00000445064 MTMR12Q9C0I1 747 aa16.59■□□□□ 0.25
SEC13-213ENST00000445064 EBF3Q9H4W6 596 aa16.59■□□□□ 0.25
SEC13-213ENST00000445064 TMEM206Q9H813 350 aa16.59■□□□□ 0.25
SEC13-213ENST00000445064 HPS4Q9NQG7 708 aa16.59■□□□□ 0.25
SEC13-213ENST00000445064 GDAP2Q9NXN4 497 aa16.59■□□□□ 0.25
SEC13-213ENST00000445064 SIX4Q9UIU6 781 aa16.59■□□□□ 0.25
SEC13-213ENST00000445064 ZMYM5Q9UJ78 669 aa16.59■□□□□ 0.25
SEC13-213ENST00000445064 ITGA11Q9UKX5 1188 aa16.59■□□□□ 0.25
SEC13-213ENST00000445064 PAPSS2O95340 614 aaPredicted RBP16.58■□□□□ 0.24
SEC13-213ENST00000445064 TMEM191BP0C7N4 346 aa16.58■□□□□ 0.24
SEC13-213ENST00000445064 SDHBP21912 280 aa16.58■□□□□ 0.24
SEC13-213ENST00000445064 DDX6P26196 483 aaKnown RBP eCLIP16.58■□□□□ 0.24
SEC13-213ENST00000445064 LMNB2Q03252 620 aa16.58■□□□□ 0.24
SEC13-213ENST00000445064 SOWAHAQ2M3V2 549 aa16.58■□□□□ 0.24
SEC13-213ENST00000445064 PKN3Q6P5Z2 889 aa16.58■□□□□ 0.24
SEC13-213ENST00000445064 MON1AQ86VX9 555 aa16.58■□□□□ 0.24
SEC13-213ENST00000445064 SYNPOQ8N3V7 929 aa16.58■□□□□ 0.24
SEC13-213ENST00000445064 LEO1Q8WVC0 666 aaPredicted RBP16.58■□□□□ 0.24
SEC13-213ENST00000445064 CYP2S1Q96SQ9 504 aa16.58■□□□□ 0.24
SEC13-213ENST00000445064 PKMYT1Q99640 499 aa16.58■□□□□ 0.24
SEC13-213ENST00000445064 ZSCAN16Q9H4T2 348 aaPredicted RBP16.58■□□□□ 0.24
SEC13-213ENST00000445064 TFIP11Q9UBB9 837 aaKnown RBP16.58■□□□□ 0.24
SEC13-213ENST00000445064 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.58■□□□□ 0.24
SEC13-213ENST00000445064 DCDC2BA2VCK2 349 aa16.57■□□□□ 0.24
SEC13-213ENST00000445064 GABRDO14764 452 aa16.57■□□□□ 0.24
SEC13-213ENST00000445064 ATP2C2O75185 946 aa16.57■□□□□ 0.24
SEC13-213ENST00000445064 RETP07949 1114 aa16.57■□□□□ 0.24
SEC13-213ENST00000445064 ARSAP15289 507 aa16.57■□□□□ 0.24
SEC13-213ENST00000445064 CNR2P34972 360 aa16.57■□□□□ 0.24
SEC13-213ENST00000445064 LHX1P48742 406 aa16.57■□□□□ 0.24
SEC13-213ENST00000445064 FSTL4Q6MZW2 842 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms