RNA–Protein interactions for RNA: ENST00000444746.6

RIF1-205, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 7,897 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-205ENST00000444746 IQCA1LA6NCM1 817 aa8.36□□□□□ -1.07
RIF1-205ENST00000444746 SLITRK3O94933 977 aa8.36□□□□□ -1.07
RIF1-205ENST00000444746 MAGEA9P43362 315 aa8.36□□□□□ -1.07
RIF1-205ENST00000444746 PPP1R2P3Q6NXS1 205 aa8.36□□□□□ -1.07
RIF1-205ENST00000444746 SCG3Q8WXD2 468 aaKnown RBP8.36□□□□□ -1.07
RIF1-205ENST00000444746 PARK7Q99497 189 aaKnown RBP8.36□□□□□ -1.07
RIF1-205ENST00000444746 DUSP9Q99956 384 aaKnown RBP8.36□□□□□ -1.07
RIF1-205ENST00000444746 ERAP1Q9NZ08 941 aa8.36□□□□□ -1.07
RIF1-205ENST00000444746 CD274Q9NZQ7 290 aa8.36□□□□□ -1.07
RIF1-205ENST00000444746 FAM198AQ9UFP1 575 aa8.36□□□□□ -1.07
RIF1-205ENST00000444746 DIP2CQ9Y2E4 1556 aa8.36□□□□□ -1.07
RIF1-205ENST00000444746 C3orf70A6NLC5 250 aaPredicted RBP8.35□□□□□ -1.07
RIF1-205ENST00000444746 KBTBD13C9JR72 458 aa8.35□□□□□ -1.07
RIF1-205ENST00000444746 TPST1O60507 370 aa8.35□□□□□ -1.07
RIF1-205ENST00000444746 BACE1P56817 501 aa8.35□□□□□ -1.07
RIF1-205ENST00000444746 OTUD4Q01804 1114 aaKnown RBP8.35□□□□□ -1.07
RIF1-205ENST00000444746 STX3Q13277 289 aa8.35□□□□□ -1.07
RIF1-205ENST00000444746 CCDC157Q569K6 752 aa8.35□□□□□ -1.07
RIF1-205ENST00000444746 KCTD10Q9H3F6 313 aa8.35□□□□□ -1.07
RIF1-205ENST00000444746 NOP53Q9NZM5 478 aaKnown RBP8.35□□□□□ -1.07
RIF1-205ENST00000444746 CYB561D2O14569 222 aa8.35□□□□□ -1.07
RIF1-205ENST00000444746 CHRM3P20309 590 aa8.35□□□□□ -1.07
RIF1-205ENST00000444746 ARHGDIAP52565 204 aa8.35□□□□□ -1.07
RIF1-205ENST00000444746 UBE3AQ05086 875 aa8.35□□□□□ -1.07
RIF1-205ENST00000444746 SLC13A5Q86YT5 568 aaPredicted RBP8.35□□□□□ -1.07
RIF1-205ENST00000444746 ANKRD13AQ8IZ07 590 aa8.35□□□□□ -1.07
RIF1-205ENST00000444746 PCDHB2Q9Y5E7 798 aa8.35□□□□□ -1.07
RIF1-205ENST00000444746 ORC6Q9Y5N6 252 aa8.35□□□□□ -1.07
RIF1-205ENST00000444746 SSU72P8A0A1W2PR75 194 aa8.35□□□□□ -1.07
RIF1-205ENST00000444746 FAM47DPA6NHR8 397 aa8.35□□□□□ -1.07
RIF1-205ENST00000444746 TRIM49D1C9J1S8 452 aa8.35□□□□□ -1.07
RIF1-205ENST00000444746 FOXR1Q6PIV2 292 aa8.35□□□□□ -1.07
RIF1-205ENST00000444746 NPNTQ6UXI9 565 aa8.35□□□□□ -1.07
RIF1-205ENST00000444746 ENOSF1Q7L5Y1 443 aa8.35□□□□□ -1.07
RIF1-205ENST00000444746 TFAP2DQ7Z6R9 452 aa8.35□□□□□ -1.07
RIF1-205ENST00000444746 CARNMT1Q8N4J0 409 aa8.35□□□□□ -1.07
RIF1-205ENST00000444746 ANKRD7Q92527 254 aa8.35□□□□□ -1.07
RIF1-205ENST00000444746 SLC5A5Q92911 643 aa8.35□□□□□ -1.07
RIF1-205ENST00000444746 ZDHHC15Q96MV8 337 aa8.35□□□□□ -1.07
RIF1-205ENST00000444746 MKNK1Q9BUB5 465 aa8.35□□□□□ -1.07
RIF1-205ENST00000444746 GOLGA8QA0A0J9YX86 632 aa8.35□□□□□ -1.07
RIF1-205ENST00000444746 GOLGA8OA6NCC3 632 aa8.35□□□□□ -1.07
RIF1-205ENST00000444746 GOLGA8NF8WBI6 632 aa8.35□□□□□ -1.07
RIF1-205ENST00000444746 PDHXO00330 501 aa8.35□□□□□ -1.07
RIF1-205ENST00000444746 B3GAT3O94766 335 aa8.35□□□□□ -1.07
RIF1-205ENST00000444746 DDHD2O94830 711 aa8.35□□□□□ -1.07
RIF1-205ENST00000444746 PARNO95453 639 aaKnown RBP8.35□□□□□ -1.07
RIF1-205ENST00000444746 LRRC74AQ0VAA2 488 aa8.35□□□□□ -1.07
RIF1-205ENST00000444746 PWP1Q13610 501 aa8.35□□□□□ -1.07
RIF1-205ENST00000444746 MORF4L2Q15014 288 aa8.35□□□□□ -1.07
RIF1-205ENST00000444746 CBWD6Q4V339 395 aa8.35□□□□□ -1.07
RIF1-205ENST00000444746 CBWD3Q5JTY5 395 aa8.35□□□□□ -1.07
RIF1-205ENST00000444746 CBWD5Q5RIA9 395 aa8.35□□□□□ -1.07
RIF1-205ENST00000444746 IER5Q5VY09 327 aa8.35□□□□□ -1.07
RIF1-205ENST00000444746 ITPRIPL1Q6GPH6 555 aa8.35□□□□□ -1.07
RIF1-205ENST00000444746 APOBEC3HQ6NTF7 200 aaKnown RBP8.35□□□□□ -1.07
RIF1-205ENST00000444746 ZSWIM1Q9BR11 485 aa8.35□□□□□ -1.07
RIF1-205ENST00000444746 MYO1GB0I1T2 1018 aa8.35□□□□□ -1.07
RIF1-205ENST00000444746 HBP1O60381 514 aa8.35□□□□□ -1.07
RIF1-205ENST00000444746 SLC1A1P43005 524 aa8.35□□□□□ -1.07
RIF1-205ENST00000444746 LRRC4BQ9NT99 713 aa8.35□□□□□ -1.07
RIF1-205ENST00000444746 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.35□□□□□ -1.07
RIF1-205ENST00000444746 SH3BGRLO75368 114 aa8.35□□□□□ -1.07
RIF1-205ENST00000444746 EEF1DP29692 281 aaKnown RBP8.35□□□□□ -1.07
RIF1-205ENST00000444746 HSD17B4P51659 736 aa8.35□□□□□ -1.07
RIF1-205ENST00000444746 EFEMP1Q12805 493 aa8.35□□□□□ -1.07
RIF1-205ENST00000444746 ORC2Q13416 577 aaPredicted RBP8.35□□□□□ -1.07
RIF1-205ENST00000444746 ZNF720Q7Z2F6 126 aa8.35□□□□□ -1.07
RIF1-205ENST00000444746 CDCA5Q96FF9 252 aa8.35□□□□□ -1.07
RIF1-205ENST00000444746 SERPINI1Q99574 410 aa8.35□□□□□ -1.07
RIF1-205ENST00000444746 ERP44Q9BS26 406 aa8.35□□□□□ -1.07
RIF1-205ENST00000444746 EPN3Q9H201 632 aa8.35□□□□□ -1.07
RIF1-205ENST00000444746 WNT10BO00744 389 aa8.34□□□□□ -1.07
RIF1-205ENST00000444746 EPHX2P34913 555 aa8.34□□□□□ -1.07
RIF1-205ENST00000444746 LAMTOR4Q0VGL1 99 aa8.34□□□□□ -1.07
RIF1-205ENST00000444746 LLGL2Q6P1M3 1020 aa8.34□□□□□ -1.07
RIF1-205ENST00000444746 TRIM72Q6ZMU5 477 aa8.34□□□□□ -1.07
RIF1-205ENST00000444746 NDUFAF2Q8N183 169 aa8.34□□□□□ -1.07
RIF1-205ENST00000444746 SNX31Q8N9S9 440 aa8.34□□□□□ -1.07
RIF1-205ENST00000444746 MYCBPQ99417 103 aaPredicted RBP8.34□□□□□ -1.07
RIF1-205ENST00000444746 SMPD4Q9NXE4 827 aa8.34□□□□□ -1.07
RIF1-205ENST00000444746 UVRAGQ9P2Y5 699 aa8.34□□□□□ -1.07
RIF1-205ENST00000444746 ZNF263O14978 683 aa8.34□□□□□ -1.07
RIF1-205ENST00000444746 DDX39BQ13838 428 aaKnown RBP8.34□□□□□ -1.07
RIF1-205ENST00000444746 C6orf10Q5SRN2 563 aa8.34□□□□□ -1.07
RIF1-205ENST00000444746 C16orf59Q7L2K0 433 aa8.34□□□□□ -1.07
RIF1-205ENST00000444746 DAGLBQ8NCG7 672 aa8.34□□□□□ -1.07
RIF1-205ENST00000444746 KLC4Q9NSK0 619 aa8.34□□□□□ -1.07
RIF1-205ENST00000444746 BLOC1S4Q9NUP1 217 aa8.34□□□□□ -1.07
RIF1-205ENST00000444746 PCDHB7Q9Y5E2 793 aa8.34□□□□□ -1.07
RIF1-205ENST00000444746 IGSF9BQ9UPX0 1349 aa8.34□□□□□ -1.07
RIF1-205ENST00000444746 CCDC130P13994 396 aa8.34□□□□□ -1.07
RIF1-205ENST00000444746 INSRRP14616 1297 aa8.34□□□□□ -1.07
RIF1-205ENST00000444746 CYP2C19P33261 490 aa8.34□□□□□ -1.07
RIF1-205ENST00000444746 PTPN7P35236 360 aa8.34□□□□□ -1.07
RIF1-205ENST00000444746 SREBF1P36956 1147 aa8.34□□□□□ -1.07
RIF1-205ENST00000444746 DAB2P98082 770 aa8.34□□□□□ -1.07
RIF1-205ENST00000444746 VEPH1Q14D04 833 aa8.34□□□□□ -1.07
RIF1-205ENST00000444746 ATP13A4Q4VNC1 1196 aa8.34□□□□□ -1.07
RIF1-205ENST00000444746 SPOCD1Q6ZMY3 1216 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms