RNA–Protein interactions for RNA: ENST00000444177.1

TREX1-202, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-202ENST00000444177 SOAT2O75908 522 aa15.04■□□□□ -0
TREX1-202ENST00000444177 NR3C1P04150 777 aa15.04■□□□□ -0
TREX1-202ENST00000444177 GDI1P31150 447 aa15.04■□□□□ -0
TREX1-202ENST00000444177 CDR1P51861 262 aa15.04■□□□□ -0
TREX1-202ENST00000444177 MYO1EQ12965 1108 aa15.04■□□□□ -0
TREX1-202ENST00000444177 SLC39A12Q504Y0 691 aa15.04■□□□□ -0
TREX1-202ENST00000444177 CEP135Q66GS9 1140 aa15.04■□□□□ -0
TREX1-202ENST00000444177 SCARA3Q6AZY7 606 aa15.04■□□□□ -0
TREX1-202ENST00000444177 VITQ6UXI7 678 aa15.04■□□□□ -0
TREX1-202ENST00000444177 ZNF852Q6ZMS4 543 aa15.04■□□□□ -0
TREX1-202ENST00000444177 LRRTM3Q86VH5 581 aa15.04■□□□□ -0
TREX1-202ENST00000444177 MFSD6LQ8IWD5 586 aa15.04■□□□□ -0
TREX1-202ENST00000444177 MAML2Q8IZL2 1156 aaPredicted RBP15.04■□□□□ -0
TREX1-202ENST00000444177 CXorf38Q8TB03 319 aa15.04■□□□□ -0
TREX1-202ENST00000444177 IRF7Q92985 503 aa15.04■□□□□ -0
TREX1-202ENST00000444177 PSMG2Q969U7 264 aa15.04■□□□□ -0
TREX1-202ENST00000444177 CLDN23Q96B33 292 aa15.04■□□□□ -0
TREX1-202ENST00000444177 SEMA4AQ9H3S1 761 aa15.04■□□□□ -0
TREX1-202ENST00000444177 SLITRK6Q9H5Y7 841 aa15.04■□□□□ -0
TREX1-202ENST00000444177 L1RE1Q9UN81 338 aa15.04■□□□□ -0
TREX1-202ENST00000444177 SNX9Q9Y5X1 595 aa15.04■□□□□ -0
TREX1-202ENST00000444177 OTOGLQ3ZCN5 2332 aa15.03■□□□□ -0
TREX1-202ENST00000444177 PDXKO00764 312 aa15.03■□□□□ -0
TREX1-202ENST00000444177 CLSTN1O94985 981 aa15.03■□□□□ -0
TREX1-202ENST00000444177 TARSP26639 723 aaKnown RBP15.03■□□□□ -0
TREX1-202ENST00000444177 TUFMP49411 452 aaKnown RBP15.03■□□□□ -0
TREX1-202ENST00000444177 CASP4P49662 377 aa15.03■□□□□ -0
TREX1-202ENST00000444177 FZD5Q13467 585 aa15.03■□□□□ -0
TREX1-202ENST00000444177 GAREM2Q75VX8 874 aa15.03■□□□□ -0
TREX1-202ENST00000444177 TRAPPC11Q7Z392 1133 aa15.03■□□□□ -0
TREX1-202ENST00000444177 ITIH5Q86UX2 942 aa15.03■□□□□ -0
TREX1-202ENST00000444177 GPIHBP1Q8IV16 184 aa15.03■□□□□ -0
TREX1-202ENST00000444177 ADSSL1Q8N142 457 aa15.03■□□□□ -0
TREX1-202ENST00000444177 PDCL2Q8N4E4 241 aa15.03■□□□□ -0
TREX1-202ENST00000444177 ENGASEQ8NFI3 743 aa15.03■□□□□ -0
TREX1-202ENST00000444177 DEPDC1BQ8WUY9 529 aa15.03■□□□□ -0
TREX1-202ENST00000444177 HPDLQ96IR7 371 aa15.03■□□□□ -0
TREX1-202ENST00000444177 SEPT5Q99719 369 aaPredicted RBP15.03■□□□□ -0
TREX1-202ENST00000444177 ZNF334Q9HCZ1 680 aaPredicted RBP15.03■□□□□ -0
TREX1-202ENST00000444177 TRPV5Q9NQA5 729 aa15.03■□□□□ -0
TREX1-202ENST00000444177 SPATA6Q9NWH7 488 aaPredicted RBP15.03■□□□□ -0
TREX1-202ENST00000444177 RMND1Q9NWS8 449 aa15.03■□□□□ -0
TREX1-202ENST00000444177 HOOK1Q9UJC3 728 aaKnown RBP15.03■□□□□ -0
TREX1-202ENST00000444177 MRPS17Q9Y2R5 130 aaKnown RBP15.03■□□□□ -0
TREX1-202ENST00000444177 HEPACAM2A8MVW5 462 aa15.02■□□□□ -0
TREX1-202ENST00000444177 MAN2B1O00754 1011 aa15.02■□□□□ -0
TREX1-202ENST00000444177 ZNF263O14978 683 aa15.02■□□□□ -0
TREX1-202ENST00000444177 NCAM2O15394 837 aa15.02■□□□□ -0
TREX1-202ENST00000444177 FGF19O95750 216 aa15.02■□□□□ -0
TREX1-202ENST00000444177 MAGEA9P43362 315 aa15.02■□□□□ -0
TREX1-202ENST00000444177 TSPY1Q01534 308 aa15.02■□□□□ -0
TREX1-202ENST00000444177 SMARCB1Q12824 385 aa15.02■□□□□ -0
TREX1-202ENST00000444177 MGAT5BQ3V5L5 792 aa15.02■□□□□ -0
TREX1-202ENST00000444177 STXBP5Q5T5C0 1151 aa15.02■□□□□ -0
TREX1-202ENST00000444177 SLC9A9Q8IVB4 645 aa15.02■□□□□ -0
TREX1-202ENST00000444177 SMYD4Q8IYR2 804 aaPredicted RBP15.02■□□□□ -0
TREX1-202ENST00000444177 ADGRF2Q8IZF7 708 aa15.02■□□□□ -0
TREX1-202ENST00000444177 TMEM86AQ8N2M4 240 aa15.02■□□□□ -0
TREX1-202ENST00000444177 GUF1Q8N442 669 aaKnown RBP15.02■□□□□ -0
TREX1-202ENST00000444177 TOP6BLQ8N6T0 577 aa15.02■□□□□ -0
TREX1-202ENST00000444177 FAM200AQ8TCP9 573 aa15.02■□□□□ -0
TREX1-202ENST00000444177 ERCC4Q92889 916 aaPredicted RBP15.02■□□□□ -0
TREX1-202ENST00000444177 E2F7Q96AV8 911 aa15.02■□□□□ -0
TREX1-202ENST00000444177 RSPRY1Q96DX4 576 aa15.02■□□□□ -0
TREX1-202ENST00000444177 LPIN3Q9BQK8 851 aa15.02■□□□□ -0
TREX1-202ENST00000444177 ATXN3LQ9H3M9 355 aa15.02■□□□□ -0
TREX1-202ENST00000444177 DMAC2Q9NW81 257 aa15.02■□□□□ -0
TREX1-202ENST00000444177 DDX43Q9NXZ2 648 aaKnown RBP15.02■□□□□ -0
TREX1-202ENST00000444177 TRAF3IP3Q9Y228 551 aa15.02■□□□□ -0
TREX1-202ENST00000444177 NCANO14594 1321 aa15.01□□□□□ -0.01
TREX1-202ENST00000444177 LRRIQ3A6PVS8 624 aaPredicted RBP15.01□□□□□ -0.01
TREX1-202ENST00000444177 LAMTOR5O43504 91 aa15.01□□□□□ -0.01
TREX1-202ENST00000444177 KINO60870 393 aaKnown RBP15.01□□□□□ -0.01
TREX1-202ENST00000444177 PHACTR2O75167 634 aa15.01□□□□□ -0.01
TREX1-202ENST00000444177 SMC2O95347 1197 aa15.01□□□□□ -0.01
TREX1-202ENST00000444177 LMNAP02545 664 aaKnown RBP15.01□□□□□ -0.01
TREX1-202ENST00000444177 HAPLN1P10915 354 aaPredicted RBP15.01□□□□□ -0.01
TREX1-202ENST00000444177 NR2F2P24468 414 aa15.01□□□□□ -0.01
TREX1-202ENST00000444177 ACAT1P24752 427 aaKnown RBP15.01□□□□□ -0.01
TREX1-202ENST00000444177 GABRR2P28476 465 aa15.01□□□□□ -0.01
TREX1-202ENST00000444177 RPS9P46781 194 aaKnown RBP15.01□□□□□ -0.01
TREX1-202ENST00000444177 MYL7Q01449 175 aa15.01□□□□□ -0.01
TREX1-202ENST00000444177 BIRC3Q13489 604 aa15.01□□□□□ -0.01
TREX1-202ENST00000444177 TRPC3Q13507 836 aa15.01□□□□□ -0.01
TREX1-202ENST00000444177 ARID3BQ8IVW6 561 aaPredicted RBP15.01□□□□□ -0.01
TREX1-202ENST00000444177 DCP1BQ8IZD4 617 aaKnown RBP15.01□□□□□ -0.01
TREX1-202ENST00000444177 ZNF687Q8N1G0 1237 aa15.01□□□□□ -0.01
TREX1-202ENST00000444177 SPPL2BQ8TCT7 592 aa15.01□□□□□ -0.01
TREX1-202ENST00000444177 PLEKHO2Q8TD55 490 aa15.01□□□□□ -0.01
TREX1-202ENST00000444177 C2orf15Q8WU43 125 aaKnown RBP15.01□□□□□ -0.01
TREX1-202ENST00000444177 SMARCE1Q969G3 411 aa15.01□□□□□ -0.01
TREX1-202ENST00000444177 TIGD1Q96MW7 591 aa15.01□□□□□ -0.01
TREX1-202ENST00000444177 MKNK1Q9BUB5 465 aa15.01□□□□□ -0.01
TREX1-202ENST00000444177 GZF1Q9H116 711 aaPredicted RBP15.01□□□□□ -0.01
TREX1-202ENST00000444177 GDAP2Q9NXN4 497 aa15.01□□□□□ -0.01
TREX1-202ENST00000444177 ABI2Q9NYB9 513 aaPredicted RBP15.01□□□□□ -0.01
TREX1-202ENST00000444177 FBXO4Q9UKT5 387 aa15.01□□□□□ -0.01
TREX1-202ENST00000444177 FRMD4BQ9Y2L6 1034 aa15.01□□□□□ -0.01
TREX1-202ENST00000444177 MIA3Q5JRA6 1907 aa15.01□□□□□ -0.01
TREX1-202ENST00000444177 GADD45BO75293 160 aaPredicted RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms