RNA–Protein interactions for RNA: ENST00000444118.5

CCDC197-202, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,937 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-202ENST00000444118 HES2Q9Y543 173 aa18.23■□□□□ 0.51
CCDC197-202ENST00000444118 PPFIA2O75334 1257 aa18.22■□□□□ 0.51
CCDC197-202ENST00000444118 ECEL1O95672 775 aa18.22■□□□□ 0.51
CCDC197-202ENST00000444118 RALAP11233 206 aa18.22■□□□□ 0.51
CCDC197-202ENST00000444118 PDCLQ13371 301 aa18.22■□□□□ 0.51
CCDC197-202ENST00000444118 TAF2Q6P1X5 1199 aa18.22■□□□□ 0.51
CCDC197-202ENST00000444118 LRIG3Q6UXM1 1119 aa18.22■□□□□ 0.51
CCDC197-202ENST00000444118 XYLT1Q86Y38 959 aa18.22■□□□□ 0.51
CCDC197-202ENST00000444118 BEST2Q8NFU1 509 aa18.22■□□□□ 0.51
CCDC197-202ENST00000444118 RBM41Q96IZ5 413 aaKnown RBP18.22■□□□□ 0.51
CCDC197-202ENST00000444118 NT5C1AQ9BXI3 368 aa18.22■□□□□ 0.51
CCDC197-202ENST00000444118 OSBPL8Q9BZF1 889 aa18.22■□□□□ 0.51
CCDC197-202ENST00000444118 TRIM6Q9C030 488 aaPredicted RBP18.22■□□□□ 0.51
CCDC197-202ENST00000444118 HOMER3Q9NSC5 361 aa18.22■□□□□ 0.51
CCDC197-202ENST00000444118 TJP2Q9UDY2 1190 aa18.22■□□□□ 0.51
CCDC197-202ENST00000444118 TUBGCP4Q9UGJ1 667 aa18.22■□□□□ 0.51
CCDC197-202ENST00000444118 PARP2Q9UGN5 583 aa18.22■□□□□ 0.51
CCDC197-202ENST00000444118 PIN4Q9Y237 131 aaKnown RBP18.22■□□□□ 0.51
CCDC197-202ENST00000444118 USTQ9Y2C2 406 aa18.22■□□□□ 0.51
CCDC197-202ENST00000444118 F8VP50 259 aa18.21■□□□□ 0.51
CCDC197-202ENST00000444118 TCF4P15884 667 aa18.21■□□□□ 0.51
CCDC197-202ENST00000444118 PTPN7P35236 360 aa18.21■□□□□ 0.51
CCDC197-202ENST00000444118 RPL21P46778 160 aaKnown RBP18.21■□□□□ 0.51
CCDC197-202ENST00000444118 GJA9P57773 515 aa18.21■□□□□ 0.51
CCDC197-202ENST00000444118 ZNF268Q14587 947 aaPredicted RBP18.21■□□□□ 0.51
CCDC197-202ENST00000444118 STILQ15468 1287 aa18.21■□□□□ 0.51
CCDC197-202ENST00000444118 KCTD19Q17RG1 926 aaPredicted RBP18.21■□□□□ 0.51
CCDC197-202ENST00000444118 UBXN11Q5T124 520 aa18.21■□□□□ 0.51
CCDC197-202ENST00000444118 LCLAT1Q6UWP7 414 aa18.21■□□□□ 0.51
CCDC197-202ENST00000444118 POLNQ7Z5Q5 900 aa18.21■□□□□ 0.51
CCDC197-202ENST00000444118 C7orf31Q8N865 590 aa18.21■□□□□ 0.51
CCDC197-202ENST00000444118 DCLK3Q9C098 648 aa18.21■□□□□ 0.51
CCDC197-202ENST00000444118 UBQLN1Q9UMX0 589 aaKnown RBP18.21■□□□□ 0.51
CCDC197-202ENST00000444118 MYADML2A6NDP7 307 aa18.21■□□□□ 0.51
CCDC197-202ENST00000444118 H0YGN5 161 aa18.21■□□□□ 0.51
CCDC197-202ENST00000444118 M0QYV0 167 aa18.21■□□□□ 0.51
CCDC197-202ENST00000444118 PPEF2O14830 753 aa18.21■□□□□ 0.51
CCDC197-202ENST00000444118 ERBB2P04626 1255 aa18.21■□□□□ 0.51
CCDC197-202ENST00000444118 KRT3P12035 628 aa18.21■□□□□ 0.51
CCDC197-202ENST00000444118 RFC1P35251 1148 aaPredicted RBP18.21■□□□□ 0.51
CCDC197-202ENST00000444118 NKX3-2P78367 333 aa18.21■□□□□ 0.51
CCDC197-202ENST00000444118 SYDE1Q6ZW31 735 aaPredicted RBP18.21■□□□□ 0.51
CCDC197-202ENST00000444118 CCDC50Q8IVM0 306 aa18.21■□□□□ 0.51
CCDC197-202ENST00000444118 RCOR2Q8IZ40 523 aa18.21■□□□□ 0.51
CCDC197-202ENST00000444118 GOLGA6L1Q8N7Z2 621 aa18.21■□□□□ 0.51
CCDC197-202ENST00000444118 C1orf54Q8WWF1 131 aa18.21■□□□□ 0.51
CCDC197-202ENST00000444118 MCRS1Q96EZ8 462 aa18.21■□□□□ 0.51
CCDC197-202ENST00000444118 HHIPL1Q96JK4 782 aa18.21■□□□□ 0.51
CCDC197-202ENST00000444118 UPF3AQ9H1J1 476 aaKnown RBP18.21■□□□□ 0.51
CCDC197-202ENST00000444118 CHST7Q9NS84 486 aa18.21■□□□□ 0.51
CCDC197-202ENST00000444118 SNX24Q9Y343 169 aa18.21■□□□□ 0.51
CCDC197-202ENST00000444118 NFS1Q9Y697 457 aa18.21■□□□□ 0.51
CCDC197-202ENST00000444118 GOLGA6CA6NDK9 693 aa18.2■□□□□ 0.5
CCDC197-202ENST00000444118 KRT14P02533 472 aa18.2■□□□□ 0.5
CCDC197-202ENST00000444118 GOLGA6DP0CG33 693 aa18.2■□□□□ 0.5
CCDC197-202ENST00000444118 KCNE1P15382 129 aa18.2■□□□□ 0.5
CCDC197-202ENST00000444118 CYP3A5P20815 502 aa18.2■□□□□ 0.5
CCDC197-202ENST00000444118 KCNJ1P48048 391 aa18.2■□□□□ 0.5
CCDC197-202ENST00000444118 COPS2P61201 443 aa18.2■□□□□ 0.5
CCDC197-202ENST00000444118 PSMC1P62191 440 aaKnown RBP18.2■□□□□ 0.5
CCDC197-202ENST00000444118 NFX1Q12986 1120 aaKnown RBP18.2■□□□□ 0.5
CCDC197-202ENST00000444118 C9orf57Q5W0N0 161 aa18.2■□□□□ 0.5
CCDC197-202ENST00000444118 ANKS1BQ7Z6G8 1248 aa18.2■□□□□ 0.5
CCDC197-202ENST00000444118 FBXO25Q8TCJ0 367 aa18.2■□□□□ 0.5
CCDC197-202ENST00000444118 HEXIM2Q96MH2 286 aaKnown RBP18.2■□□□□ 0.5
CCDC197-202ENST00000444118 SLITRK1Q96PX8 696 aa18.2■□□□□ 0.5
CCDC197-202ENST00000444118 GOLGA6AQ9NYA3 693 aa18.2■□□□□ 0.5
CCDC197-202ENST00000444118 PLAAQ9Y263 795 aa18.2■□□□□ 0.5
CCDC197-202ENST00000444118 THSD7BQ9C0I4 1608 aa18.2■□□□□ 0.5
CCDC197-202ENST00000444118 DNAH12Q6ZR08 3092 aa18.2■□□□□ 0.5
CCDC197-202ENST00000444118 FCGRTP55899 365 aa18.19■□□□□ 0.5
CCDC197-202ENST00000444118 LLGL1Q15334 1064 aa18.19■□□□□ 0.5
CCDC197-202ENST00000444118 CCNG2Q16589 344 aa18.19■□□□□ 0.5
CCDC197-202ENST00000444118 DEFB115Q30KQ5 88 aa18.19■□□□□ 0.5
CCDC197-202ENST00000444118 TTMPQ5BVD1 217 aa18.19■□□□□ 0.5
CCDC197-202ENST00000444118 DNAJC5GQ8N7S2 189 aa18.19■□□□□ 0.5
CCDC197-202ENST00000444118 GRK7Q8WTQ7 553 aa18.19■□□□□ 0.5
CCDC197-202ENST00000444118 TRIB2Q92519 343 aa18.19■□□□□ 0.5
CCDC197-202ENST00000444118 C18orf25Q96B23 403 aaPredicted RBP18.19■□□□□ 0.5
CCDC197-202ENST00000444118 DDX56Q9NY93 547 aaKnown RBP18.19■□□□□ 0.5
CCDC197-202ENST00000444118 TSPAN16Q9UKR8 245 aa18.19■□□□□ 0.5
CCDC197-202ENST00000444118 R3HDM2Q9Y2K5 976 aaKnown RBP18.19■□□□□ 0.5
CCDC197-202ENST00000444118 PIRO00625 290 aa18.19■□□□□ 0.5
CCDC197-202ENST00000444118 CD4P01730 458 aa18.19■□□□□ 0.5
CCDC197-202ENST00000444118 C6orf222P0C671 652 aaPredicted RBP18.19■□□□□ 0.5
CCDC197-202ENST00000444118 CETN2P41208 172 aa18.19■□□□□ 0.5
CCDC197-202ENST00000444118 SLC25A11Q02978 314 aaKnown RBP18.19■□□□□ 0.5
CCDC197-202ENST00000444118 DHX9Q08211 1270 aaKnown RBP18.19■□□□□ 0.5
CCDC197-202ENST00000444118 PKDCCQ504Y2 493 aa18.19■□□□□ 0.5
CCDC197-202ENST00000444118 GLRA4Q5JXX5 417 aa18.19■□□□□ 0.5
CCDC197-202ENST00000444118 JOSD2Q8TAC2 188 aa18.19■□□□□ 0.5
CCDC197-202ENST00000444118 ATG4AQ8WYN0 398 aa18.19■□□□□ 0.5
CCDC197-202ENST00000444118 ARL8AQ96BM9 186 aa18.19■□□□□ 0.5
CCDC197-202ENST00000444118 MRPL45Q9BRJ2 306 aaKnown RBP18.19■□□□□ 0.5
CCDC197-202ENST00000444118 MTG1Q9BT17 334 aaPredicted RBP18.19■□□□□ 0.5
CCDC197-202ENST00000444118 FEZ2Q9UHY8 353 aaPredicted RBP18.19■□□□□ 0.5
CCDC197-202ENST00000444118 PTPN22Q9Y2R2 807 aa18.19■□□□□ 0.5
CCDC197-202ENST00000444118 SNX9Q9Y5X1 595 aa18.19■□□□□ 0.5
CCDC197-202ENST00000444118 SMIM28A0A1B0GU29 152 aa18.18■□□□□ 0.5
CCDC197-202ENST00000444118 GOLGA8SH3BPF8 625 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms