RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 PAX3P23760 479 aa14.81□□□□□ -0.04
SMARCA4-204ENST00000444061 RPL9P32969 192 aaKnown RBP14.81□□□□□ -0.04
SMARCA4-204ENST00000444061 CDH8P55286 799 aa14.81□□□□□ -0.04
SMARCA4-204ENST00000444061 BRD3Q15059 726 aa14.81□□□□□ -0.04
SMARCA4-204ENST00000444061 ELOVL4Q9GZR5 314 aa14.81□□□□□ -0.04
SMARCA4-204ENST00000444061 MUC3BQ9H195 1237 aa14.81□□□□□ -0.04
SMARCA4-204ENST00000444061 NXF3Q9H4D5 531 aaKnown RBP14.81□□□□□ -0.04
SMARCA4-204ENST00000444061 A0A1B0GUA9 196 aa14.81□□□□□ -0.04
SMARCA4-204ENST00000444061 PI4K2BG5E9Z4 385 aa14.81□□□□□ -0.04
SMARCA4-204ENST00000444061 SLC35G1Q2M3R5 365 aa14.81□□□□□ -0.04
SMARCA4-204ENST00000444061 TSHZ1Q6ZSZ6 1077 aa14.81□□□□□ -0.04
SMARCA4-204ENST00000444061 FBXO44Q9H4M3 255 aa14.81□□□□□ -0.04
SMARCA4-204ENST00000444061 ATMINO43313 823 aaPredicted RBP14.81□□□□□ -0.04
SMARCA4-204ENST00000444061 KLRC4O43908 158 aa14.81□□□□□ -0.04
SMARCA4-204ENST00000444061 F9P00740 461 aa14.81□□□□□ -0.04
SMARCA4-204ENST00000444061 PMLP29590 882 aa14.81□□□□□ -0.04
SMARCA4-204ENST00000444061 NPY5RQ15761 445 aa14.81□□□□□ -0.04
SMARCA4-204ENST00000444061 ARSHQ5FYA8 562 aa14.81□□□□□ -0.04
SMARCA4-204ENST00000444061 IL31Q6EBC2 164 aa14.81□□□□□ -0.04
SMARCA4-204ENST00000444061 TC2NQ8N9U0 490 aa14.81□□□□□ -0.04
SMARCA4-204ENST00000444061 ASIC4Q96FT7 647 aa14.81□□□□□ -0.04
SMARCA4-204ENST00000444061 CATSPERBQ9H7T0 1116 aa14.81□□□□□ -0.04
SMARCA4-204ENST00000444061 LGR5O75473 907 aa14.8□□□□□ -0.04
SMARCA4-204ENST00000444061 MMEP08473 750 aa14.8□□□□□ -0.04
SMARCA4-204ENST00000444061 TKTL1P51854 596 aa14.8□□□□□ -0.04
SMARCA4-204ENST00000444061 FIGNQ5HY92 759 aa14.8□□□□□ -0.04
SMARCA4-204ENST00000444061 C17orf99Q6UX52 265 aa14.8□□□□□ -0.04
SMARCA4-204ENST00000444061 RCOR2Q8IZ40 523 aa14.8□□□□□ -0.04
SMARCA4-204ENST00000444061 PGBD3Q8N328 593 aa14.8□□□□□ -0.04
SMARCA4-204ENST00000444061 SMARCD1Q96GM5 515 aa14.8□□□□□ -0.04
SMARCA4-204ENST00000444061 DMAP1Q9NPF5 467 aaPredicted RBP14.8□□□□□ -0.04
SMARCA4-204ENST00000444061 PACSIN2Q9UNF0 486 aaPredicted RBP14.8□□□□□ -0.04
SMARCA4-204ENST00000444061 TJP1Q07157 1748 aa14.8□□□□□ -0.04
SMARCA4-204ENST00000444061 ZNF189O75820 626 aaPredicted RBP14.8□□□□□ -0.04
SMARCA4-204ENST00000444061 TNFSF9P41273 254 aa14.8□□□□□ -0.04
SMARCA4-204ENST00000444061 ROR1Q01973 937 aa14.8□□□□□ -0.04
SMARCA4-204ENST00000444061 SLC39A12Q504Y0 691 aa14.8□□□□□ -0.04
SMARCA4-204ENST00000444061 MBOAT7Q96N66 472 aa14.8□□□□□ -0.04
SMARCA4-204ENST00000444061 WDCPQ9H6R7 721 aa14.8□□□□□ -0.04
SMARCA4-204ENST00000444061 TSPAN16Q9UKR8 245 aa14.8□□□□□ -0.04
SMARCA4-204ENST00000444061 NOC2LQ9Y3T9 749 aaKnown RBP14.8□□□□□ -0.04
SMARCA4-204ENST00000444061 F8VZ95 297 aa14.8□□□□□ -0.04
SMARCA4-204ENST00000444061 MAPK13O15264 365 aa14.8□□□□□ -0.04
SMARCA4-204ENST00000444061 NCK2O43639 380 aa14.8□□□□□ -0.04
SMARCA4-204ENST00000444061 SNAI1O95863 264 aaPredicted RBP14.8□□□□□ -0.04
SMARCA4-204ENST00000444061 PID1Q7Z2X4 250 aa14.8□□□□□ -0.04
SMARCA4-204ENST00000444061 SLC9A9Q8IVB4 645 aa14.8□□□□□ -0.04
SMARCA4-204ENST00000444061 CEP120Q8N960 986 aa14.8□□□□□ -0.04
SMARCA4-204ENST00000444061 RAB3IL1Q8TBN0 382 aa14.8□□□□□ -0.04
SMARCA4-204ENST00000444061 ARHGAP39Q9C0H5 1083 aa14.8□□□□□ -0.04
SMARCA4-204ENST00000444061 KLHL11Q9NVR0 708 aa14.8□□□□□ -0.04
SMARCA4-204ENST00000444061 MOSPD1Q9UJG1 213 aa14.8□□□□□ -0.04
SMARCA4-204ENST00000444061 ATP8B1O43520 1251 aa14.8□□□□□ -0.04
SMARCA4-204ENST00000444061 ARL2P36404 184 aa14.8□□□□□ -0.04
SMARCA4-204ENST00000444061 EFEMP1Q12805 493 aa14.8□□□□□ -0.04
SMARCA4-204ENST00000444061 TUSC3Q13454 348 aa14.8□□□□□ -0.04
SMARCA4-204ENST00000444061 USP41Q3LFD5 358 aa14.8□□□□□ -0.04
SMARCA4-204ENST00000444061 WSCD1Q658N2 575 aa14.8□□□□□ -0.04
SMARCA4-204ENST00000444061 ZC3H18Q86VM9 953 aaKnown RBP14.8□□□□□ -0.04
SMARCA4-204ENST00000444061 PALB2Q86YC2 1186 aa14.8□□□□□ -0.04
SMARCA4-204ENST00000444061 DBF4BQ8NFT6 615 aa14.8□□□□□ -0.04
SMARCA4-204ENST00000444061 PAWRQ96IZ0 340 aaKnown RBP14.8□□□□□ -0.04
SMARCA4-204ENST00000444061 RNPC3Q96LT9 517 aaKnown RBP14.8□□□□□ -0.04
SMARCA4-204ENST00000444061 SLX4Q8IY92 1834 aa14.79□□□□□ -0.04
SMARCA4-204ENST00000444061 LSM8O95777 96 aaKnown RBP14.79□□□□□ -0.04
SMARCA4-204ENST00000444061 ADRB2P07550 413 aa14.79□□□□□ -0.04
SMARCA4-204ENST00000444061 TSTA3Q13630 321 aaPredicted RBP14.79□□□□□ -0.04
SMARCA4-204ENST00000444061 DCLRE1AQ6PJP8 1040 aa14.79□□□□□ -0.04
SMARCA4-204ENST00000444061 ANKS3Q6ZW76 656 aa14.79□□□□□ -0.04
SMARCA4-204ENST00000444061 CPLX4Q7Z7G2 160 aa14.79□□□□□ -0.04
SMARCA4-204ENST00000444061 TRIB2Q92519 343 aa14.79□□□□□ -0.04
SMARCA4-204ENST00000444061 ZBTB10Q96DT7 871 aa14.79□□□□□ -0.04
SMARCA4-204ENST00000444061 RSRC1Q96IZ7 334 aaKnown RBP14.79□□□□□ -0.04
SMARCA4-204ENST00000444061 TLR8Q9NR97 1041 aaKnown RBP14.79□□□□□ -0.04
SMARCA4-204ENST00000444061 POC1B-GALNT4F8VUJ3 575 aa14.79□□□□□ -0.04
SMARCA4-204ENST00000444061 MDM2Q00987 491 aaPredicted RBP14.79□□□□□ -0.04
SMARCA4-204ENST00000444061 CREMQ03060 361 aa14.79□□□□□ -0.04
SMARCA4-204ENST00000444061 BOLA3Q53S33 107 aa14.79□□□□□ -0.04
SMARCA4-204ENST00000444061 SDE2Q6IQ49 451 aa14.79□□□□□ -0.04
SMARCA4-204ENST00000444061 FBXO46Q6PJ61 603 aaPredicted RBP14.79□□□□□ -0.04
SMARCA4-204ENST00000444061 VPS52Q8N1B4 723 aa14.79□□□□□ -0.04
SMARCA4-204ENST00000444061 SCYL1Q96KG9 808 aa14.79□□□□□ -0.04
SMARCA4-204ENST00000444061 GTF2IRD1Q9UHL9 959 aa14.79□□□□□ -0.04
SMARCA4-204ENST00000444061 SLC12A8A0AV02 714 aa14.79□□□□□ -0.04
SMARCA4-204ENST00000444061 ASTN1O14525 1302 aa14.79□□□□□ -0.04
SMARCA4-204ENST00000444061 CLTBP09497 229 aa14.79□□□□□ -0.04
SMARCA4-204ENST00000444061 MYH3P11055 1940 aa14.79□□□□□ -0.04
SMARCA4-204ENST00000444061 LAG3P18627 525 aa14.79□□□□□ -0.04
SMARCA4-204ENST00000444061 CST9Q5W186 159 aa14.79□□□□□ -0.04
SMARCA4-204ENST00000444061 PABPC5Q96DU9 382 aaKnown RBP14.79□□□□□ -0.04
SMARCA4-204ENST00000444061 RPRD1AQ96P16 312 aaPredicted RBP14.79□□□□□ -0.04
SMARCA4-204ENST00000444061 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.79□□□□□ -0.04
SMARCA4-204ENST00000444061 I3L4J1 428 aa14.78□□□□□ -0.04
SMARCA4-204ENST00000444061 GJA5P36382 358 aa14.78□□□□□ -0.04
SMARCA4-204ENST00000444061 CDH18Q13634 790 aa14.78□□□□□ -0.04
SMARCA4-204ENST00000444061 C6orf163Q5TEZ5 329 aa14.78□□□□□ -0.04
SMARCA4-204ENST00000444061 CCDC149Q6ZUS6 474 aa14.78□□□□□ -0.04
SMARCA4-204ENST00000444061 ATPAF2Q8N5M1 289 aa14.78□□□□□ -0.04
SMARCA4-204ENST00000444061 BHMTQ93088 406 aa14.78□□□□□ -0.04
SMARCA4-204ENST00000444061 TSPAN18Q96SJ8 248 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms