RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 SMYD3Q9H7B4 428 aa11.57□□□□□ -0.56
HDAC6-211ENST00000443563 ABI2Q9NYB9 513 aaPredicted RBP11.57□□□□□ -0.56
HDAC6-211ENST00000443563 GTF3C4Q9UKN8 822 aa11.57□□□□□ -0.56
HDAC6-211ENST00000443563 YIPF1Q9Y548 306 aa11.57□□□□□ -0.56
HDAC6-211ENST00000443563 ATP8B3O60423 1300 aa11.57□□□□□ -0.56
HDAC6-211ENST00000443563 C19orf67A6NJJ6 358 aa11.56□□□□□ -0.56
HDAC6-211ENST00000443563 LOC730098B7Z3J9 87 aa11.56□□□□□ -0.56
HDAC6-211ENST00000443563 ZNF197O14709 1029 aa11.56□□□□□ -0.56
HDAC6-211ENST00000443563 FGF19O95750 216 aa11.56□□□□□ -0.56
HDAC6-211ENST00000443563 WEE2P0C1S8 567 aa11.56□□□□□ -0.56
HDAC6-211ENST00000443563 PTPN1P18031 435 aaKnown RBP11.56□□□□□ -0.56
HDAC6-211ENST00000443563 FSHRP23945 695 aa11.56□□□□□ -0.56
HDAC6-211ENST00000443563 LMO2P25791 158 aa11.56□□□□□ -0.56
HDAC6-211ENST00000443563 SSTR3P32745 418 aaPredicted RBP11.56□□□□□ -0.56
HDAC6-211ENST00000443563 ASPAP45381 313 aa11.56□□□□□ -0.56
HDAC6-211ENST00000443563 CDH8P55286 799 aa11.56□□□□□ -0.56
HDAC6-211ENST00000443563 RPL10AP62906 217 aaKnown RBP11.56□□□□□ -0.56
HDAC6-211ENST00000443563 CFAP221Q4G0U5 840 aa11.56□□□□□ -0.56
HDAC6-211ENST00000443563 PABPC1LQ4VXU2 614 aaKnown RBP11.56□□□□□ -0.56
HDAC6-211ENST00000443563 SPOPLQ6IQ16 392 aa11.56□□□□□ -0.56
HDAC6-211ENST00000443563 FAM171BQ6P995 826 aa11.56□□□□□ -0.56
HDAC6-211ENST00000443563 GRASPQ7Z6J2 395 aaPredicted RBP11.56□□□□□ -0.56
HDAC6-211ENST00000443563 LRRTM3Q86VH5 581 aa11.56□□□□□ -0.56
HDAC6-211ENST00000443563 TDRD5Q8NAT2 981 aaKnown RBP11.56□□□□□ -0.56
HDAC6-211ENST00000443563 ATAD1Q8NBU5 361 aa11.56□□□□□ -0.56
HDAC6-211ENST00000443563 MYCBPAPQ8TBZ2 947 aa11.56□□□□□ -0.56
HDAC6-211ENST00000443563 RPGRIP1Q96KN7 1286 aa11.56□□□□□ -0.56
HDAC6-211ENST00000443563 CEP295NLQ96MC4 621 aa11.56□□□□□ -0.56
HDAC6-211ENST00000443563 PKMYT1Q99640 499 aa11.56□□□□□ -0.56
HDAC6-211ENST00000443563 SEPT5Q99719 369 aaPredicted RBP11.56□□□□□ -0.56
HDAC6-211ENST00000443563 PI4K2AQ9BTU6 479 aa11.56□□□□□ -0.56
HDAC6-211ENST00000443563 AVENQ9NQS1 362 aaPredicted RBP11.56□□□□□ -0.56
HDAC6-211ENST00000443563 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.56□□□□□ -0.56
HDAC6-211ENST00000443563 SLC27A5Q9Y2P5 690 aa11.56□□□□□ -0.56
HDAC6-211ENST00000443563 ZFP37Q9Y6Q3 630 aaPredicted RBP11.56□□□□□ -0.56
HDAC6-211ENST00000443563 PTPRDP23468 1912 aa11.55□□□□□ -0.56
HDAC6-211ENST00000443563 MYBPHLA2RUH7 354 aa11.55□□□□□ -0.56
HDAC6-211ENST00000443563 VNN2O95498 520 aa11.55□□□□□ -0.56
HDAC6-211ENST00000443563 TPM2P07951 284 aa11.55□□□□□ -0.56
HDAC6-211ENST00000443563 HAPLN1P10915 354 aaPredicted RBP11.55□□□□□ -0.56
HDAC6-211ENST00000443563 TBXAS1P24557 533 aaPredicted RBP11.55□□□□□ -0.56
HDAC6-211ENST00000443563 EEF1GP26641 437 aaKnown RBP11.55□□□□□ -0.56
HDAC6-211ENST00000443563 MAGEA11P43364 429 aa11.55□□□□□ -0.56
HDAC6-211ENST00000443563 RAP1GAPP47736 663 aa11.55□□□□□ -0.56
HDAC6-211ENST00000443563 NDST1P52848 882 aa11.55□□□□□ -0.56
HDAC6-211ENST00000443563 PSMC1P62191 440 aaKnown RBP11.55□□□□□ -0.56
HDAC6-211ENST00000443563 CYP27A1Q02318 531 aa11.55□□□□□ -0.56
HDAC6-211ENST00000443563 TYRO3Q06418 890 aa11.55□□□□□ -0.56
HDAC6-211ENST00000443563 INCA1Q0VD86 236 aa11.55□□□□□ -0.56
HDAC6-211ENST00000443563 TAF12Q16514 161 aa11.55□□□□□ -0.56
HDAC6-211ENST00000443563 MAN2A1Q16706 1144 aa11.55□□□□□ -0.56
HDAC6-211ENST00000443563 CYP4A22Q5TCH4 519 aa11.55□□□□□ -0.56
HDAC6-211ENST00000443563 VSTM1Q6UX27 236 aa11.55□□□□□ -0.56
HDAC6-211ENST00000443563 GJD3Q8N144 294 aa11.55□□□□□ -0.56
HDAC6-211ENST00000443563 B3GALNT2Q8NCR0 500 aa11.55□□□□□ -0.56
HDAC6-211ENST00000443563 FAM200AQ8TCP9 573 aa11.55□□□□□ -0.56
HDAC6-211ENST00000443563 SEMA4DQ92854 862 aa11.55□□□□□ -0.56
HDAC6-211ENST00000443563 PSMG2Q969U7 264 aa11.55□□□□□ -0.56
HDAC6-211ENST00000443563 FAM81BQ96LP2 452 aa11.55□□□□□ -0.56
HDAC6-211ENST00000443563 MED15Q96RN5 788 aa11.55□□□□□ -0.56
HDAC6-211ENST00000443563 CORO1BQ9BR76 489 aa11.55□□□□□ -0.56
HDAC6-211ENST00000443563 APOBEC3GQ9HC16 384 aaKnown RBP11.55□□□□□ -0.56
HDAC6-211ENST00000443563 ASAH2Q9NR71 780 aa11.55□□□□□ -0.56
HDAC6-211ENST00000443563 TMLHEQ9NVH6 421 aa11.55□□□□□ -0.56
HDAC6-211ENST00000443563 NFE2L3Q9Y4A8 694 aa11.55□□□□□ -0.56
HDAC6-211ENST00000443563 TRIOO75962 3097 aa11.54□□□□□ -0.56
HDAC6-211ENST00000443563 ATP2C2O75185 946 aa11.54□□□□□ -0.56
HDAC6-211ENST00000443563 MICAL2O94851 1124 aa11.54□□□□□ -0.56
HDAC6-211ENST00000443563 RHOP08100 348 aa11.54□□□□□ -0.56
HDAC6-211ENST00000443563 GBP2P32456 591 aaPredicted RBP11.54□□□□□ -0.56
HDAC6-211ENST00000443563 MYL5Q02045 173 aa11.54□□□□□ -0.56
HDAC6-211ENST00000443563 MDH1BQ5I0G3 518 aa11.54□□□□□ -0.56
HDAC6-211ENST00000443563 PDZD4Q76G19 769 aaPredicted RBP11.54□□□□□ -0.56
HDAC6-211ENST00000443563 IRF2BP1Q8IU81 584 aa11.54□□□□□ -0.56
HDAC6-211ENST00000443563 ZDHHC14Q8IZN3 488 aa11.54□□□□□ -0.56
HDAC6-211ENST00000443563 CRYBG2Q8N1P7 616 aa11.54□□□□□ -0.56
HDAC6-211ENST00000443563 EHBP1Q8NDI1 1231 aa11.54□□□□□ -0.56
HDAC6-211ENST00000443563 ANKRD20A12PQ8NF67 263 aa11.54□□□□□ -0.56
HDAC6-211ENST00000443563 MYLPFQ96A32 169 aa11.54□□□□□ -0.56
HDAC6-211ENST00000443563 PCED1BQ96HM7 432 aa11.54□□□□□ -0.56
HDAC6-211ENST00000443563 NT5C1BQ96P26 610 aa11.54□□□□□ -0.56
HDAC6-211ENST00000443563 TUBGCP2Q9BSJ2 902 aa11.54□□□□□ -0.56
HDAC6-211ENST00000443563 NT5C1AQ9BXI3 368 aa11.54□□□□□ -0.56
HDAC6-211ENST00000443563 COL25A1Q9BXS0 654 aaPredicted RBP11.54□□□□□ -0.56
HDAC6-211ENST00000443563 ELOVL4Q9GZR5 314 aa11.54□□□□□ -0.56
HDAC6-211ENST00000443563 SDCBP2Q9H190 292 aa11.54□□□□□ -0.56
HDAC6-211ENST00000443563 CRISPLD1Q9H336 500 aa11.54□□□□□ -0.56
HDAC6-211ENST00000443563 CRTAC1Q9NQ79 661 aa11.54□□□□□ -0.56
HDAC6-211ENST00000443563 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.54□□□□□ -0.561e-15■■■■■ 67.3
HDAC6-211ENST00000443563 EHD2Q9NZN4 543 aa11.54□□□□□ -0.56
HDAC6-211ENST00000443563 CEP72Q9P209 647 aa11.54□□□□□ -0.56
HDAC6-211ENST00000443563 DNMT3BQ9UBC3 853 aaKnown RBP11.54□□□□□ -0.56
HDAC6-211ENST00000443563 CDH22Q9UJ99 828 aa11.54□□□□□ -0.56
HDAC6-211ENST00000443563 MRPS23Q9Y3D9 190 aaKnown RBP11.54□□□□□ -0.56
HDAC6-211ENST00000443563 MUC3AQ02505 3323 aa11.54□□□□□ -0.56
HDAC6-211ENST00000443563 GTPBP10A4D1E9 387 aaKnown RBP11.53□□□□□ -0.56
HDAC6-211ENST00000443563 KCNJ18B7U540 433 aa11.53□□□□□ -0.56
HDAC6-211ENST00000443563 TRIM66O15016 1216 aa11.53□□□□□ -0.56
HDAC6-211ENST00000443563 HCRTO43612 131 aa11.53□□□□□ -0.56
HDAC6-211ENST00000443563 CSH1P0DML2 217 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms