RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 P2RY13Q9BPV8 354 aa15.59■□□□□ 0.09
HMGN1-208ENST00000443046 PCNX2A6NKB5 2137 aa15.59■□□□□ 0.09
HMGN1-208ENST00000443046 LAD1O00515 517 aa15.58■□□□□ 0.08
HMGN1-208ENST00000443046 OGTO15294 1046 aa15.58■□□□□ 0.08
HMGN1-208ENST00000443046 APBB3O95704 486 aa15.58■□□□□ 0.08
HMGN1-208ENST00000443046 U2AF2P26368 475 aaKnown RBP eCLIP15.58■□□□□ 0.088e-8■■■■■ 35
HMGN1-208ENST00000443046 NMT1P30419 496 aaKnown RBP15.58■□□□□ 0.08
HMGN1-208ENST00000443046 SLC12A3P55017 1021 aa15.58■□□□□ 0.08
HMGN1-208ENST00000443046 RAD51AP2Q09MP3 1159 aa15.58■□□□□ 0.08
HMGN1-208ENST00000443046 PDGFRLQ15198 375 aa15.58■□□□□ 0.08
HMGN1-208ENST00000443046 DAB2IPQ5VWQ8 1189 aa15.58■□□□□ 0.08
HMGN1-208ENST00000443046 PMS2CLQ68D20 193 aa15.58■□□□□ 0.08
HMGN1-208ENST00000443046 TXNDC8Q6A555 127 aa15.58■□□□□ 0.08
HMGN1-208ENST00000443046 JADE1Q6IE81 842 aa15.58■□□□□ 0.08
HMGN1-208ENST00000443046 MON1AQ86VX9 555 aa15.58■□□□□ 0.08
HMGN1-208ENST00000443046 KCTD17Q8N5Z5 321 aa15.58■□□□□ 0.08
HMGN1-208ENST00000443046 RPLP0P6Q8NHW5 317 aa15.58■□□□□ 0.08
HMGN1-208ENST00000443046 SPPL2BQ8TCT7 592 aa15.58■□□□□ 0.08
HMGN1-208ENST00000443046 PNMA5Q96PV4 448 aa15.58■□□□□ 0.08
HMGN1-208ENST00000443046 ADAM33Q9BZ11 813 aa15.58■□□□□ 0.08
HMGN1-208ENST00000443046 CCSER1Q9C0I3 900 aa15.58■□□□□ 0.08
HMGN1-208ENST00000443046 RPF1Q9H9Y2 349 aaKnown RBP15.58■□□□□ 0.08
HMGN1-208ENST00000443046 KCND2Q9NZV8 630 aa15.58■□□□□ 0.08
HMGN1-208ENST00000443046 CPSF3Q9UKF6 684 aaKnown RBP15.58■□□□□ 0.08
HMGN1-208ENST00000443046 DSEQ9UL01 958 aa15.58■□□□□ 0.08
HMGN1-208ENST00000443046 DERAQ9Y315 318 aa15.58■□□□□ 0.08
HMGN1-208ENST00000443046 PCDHB6Q9Y5E3 794 aa15.58■□□□□ 0.08
HMGN1-208ENST00000443046 THADAQ6YHU6 1953 aa15.58■□□□□ 0.08
HMGN1-208ENST00000443046 PTPRDP23468 1912 aa15.57■□□□□ 0.08
HMGN1-208ENST00000443046 A0A0B4J269 797 aa15.57■□□□□ 0.08
HMGN1-208ENST00000443046 TOP3BO95985 862 aaKnown RBP15.57■□□□□ 0.08
HMGN1-208ENST00000443046 SPINK2P20155 84 aa15.57■□□□□ 0.08
HMGN1-208ENST00000443046 MATR3P43243 847 aaKnown RBP eCLIP15.57■□□□□ 0.08
HMGN1-208ENST00000443046 CDR1P51861 262 aa15.57■□□□□ 0.08
HMGN1-208ENST00000443046 NEK4P51957 841 aa15.57■□□□□ 0.08
HMGN1-208ENST00000443046 FOXC1Q12948 553 aa15.57■□□□□ 0.08
HMGN1-208ENST00000443046 DMC1Q14565 340 aa15.57■□□□□ 0.08
HMGN1-208ENST00000443046 ARSHQ5FYA8 562 aa15.57■□□□□ 0.08
HMGN1-208ENST00000443046 LLPHQ9BRT6 129 aaKnown RBP15.57■□□□□ 0.08
HMGN1-208ENST00000443046 ECT2Q9H8V3 914 aa15.57■□□□□ 0.08
HMGN1-208ENST00000443046 NOL7Q9UMY1 257 aaKnown RBP15.57■□□□□ 0.08
HMGN1-208ENST00000443046 SRRM3A6NNA2 597 aaPredicted RBP15.56■□□□□ 0.08
HMGN1-208ENST00000443046 H0YCG3 227 aa15.56■□□□□ 0.08
HMGN1-208ENST00000443046 NFICP08651 508 aa15.56■□□□□ 0.08
HMGN1-208ENST00000443046 BFSP1Q12934 665 aa15.56■□□□□ 0.08
HMGN1-208ENST00000443046 TAF12Q16514 161 aa15.56■□□□□ 0.08
HMGN1-208ENST00000443046 C11orf74Q86VG3 221 aa15.56■□□□□ 0.08
HMGN1-208ENST00000443046 RASSF3Q86WH2 238 aa15.56■□□□□ 0.08
HMGN1-208ENST00000443046 ACDQ96AP0 544 aa15.56■□□□□ 0.08
HMGN1-208ENST00000443046 TMEM9BQ9NQ34 198 aa15.56■□□□□ 0.08
HMGN1-208ENST00000443046 LARSQ9P2J5 1176 aaKnown RBP15.56■□□□□ 0.08
HMGN1-208ENST00000443046 TCHHQ07283 1943 aa15.56■□□□□ 0.08
HMGN1-208ENST00000443046 CACNA1EQ15878 2313 aa15.56■□□□□ 0.08
HMGN1-208ENST00000443046 CYB561D2O14569 222 aa15.55■□□□□ 0.08
HMGN1-208ENST00000443046 KHNYNO15037 678 aaKnown RBP15.55■□□□□ 0.08
HMGN1-208ENST00000443046 TADA3O75528 432 aa15.55■□□□□ 0.08
HMGN1-208ENST00000443046 SCP2P22307 547 aa15.55■□□□□ 0.08
HMGN1-208ENST00000443046 LIG4P49917 911 aa15.55■□□□□ 0.08
HMGN1-208ENST00000443046 ZNF77Q15935 545 aa15.55■□□□□ 0.08
HMGN1-208ENST00000443046 CC2D1AQ6P1N0 951 aaPredicted RBP15.55■□□□□ 0.08
HMGN1-208ENST00000443046 SLC39A4Q6P5W5 647 aa15.55■□□□□ 0.08
HMGN1-208ENST00000443046 DTHD1Q6ZMT9 781 aa15.55■□□□□ 0.08
HMGN1-208ENST00000443046 THEM5Q8N1Q8 247 aa15.55■□□□□ 0.08
HMGN1-208ENST00000443046 OSCP1Q8WVF1 389 aa15.55■□□□□ 0.08
HMGN1-208ENST00000443046 CD101Q93033 1021 aa15.55■□□□□ 0.08
HMGN1-208ENST00000443046 EXOC4Q96A65 974 aa15.55■□□□□ 0.08
HMGN1-208ENST00000443046 BICD1Q96G01 975 aa15.55■□□□□ 0.08
HMGN1-208ENST00000443046 SCNM1Q9BWG6 230 aa15.55■□□□□ 0.08
HMGN1-208ENST00000443046 ASB7Q9H672 318 aa15.55■□□□□ 0.08
HMGN1-208ENST00000443046 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.55■□□□□ 0.08
HMGN1-208ENST00000443046 TMLHEQ9NVH6 421 aa15.55■□□□□ 0.08
HMGN1-208ENST00000443046 CELSR3Q9NYQ7 3312 aa15.55■□□□□ 0.08
HMGN1-208ENST00000443046 ANAPC1Q9H1A4 1944 aa15.55■□□□□ 0.08
HMGN1-208ENST00000443046 GON4LQ3T8J9 2241 aa15.54■□□□□ 0.08
HMGN1-208ENST00000443046 NPHP3-ACAD11A0A0J9YXS1 232 aa15.54■□□□□ 0.08
HMGN1-208ENST00000443046 PATE3B3GLJ2 98 aa15.54■□□□□ 0.08
HMGN1-208ENST00000443046 HNRNPDLO14979 420 aaKnown RBP15.54■□□□□ 0.08
HMGN1-208ENST00000443046 PLA2G4BP0C869 781 aa15.54■□□□□ 0.08
HMGN1-208ENST00000443046 PI4KAP42356 2102 aa15.54■□□□□ 0.08
HMGN1-208ENST00000443046 FAM160A1Q05DH4 1040 aa15.54■□□□□ 0.08
HMGN1-208ENST00000443046 MTF1Q14872 753 aa15.54■□□□□ 0.08
HMGN1-208ENST00000443046 TMEM132DQ14C87 1099 aa15.54■□□□□ 0.08
HMGN1-208ENST00000443046 ACAP1Q15027 740 aa15.54■□□□□ 0.08
HMGN1-208ENST00000443046 EML3Q32P44 896 aa15.54■□□□□ 0.08
HMGN1-208ENST00000443046 USP39Q53GS9 565 aaKnown RBP15.54■□□□□ 0.08
HMGN1-208ENST00000443046 WSCD1Q658N2 575 aa15.54■□□□□ 0.08
HMGN1-208ENST00000443046 METTL23Q86XA0 190 aa15.54■□□□□ 0.08
HMGN1-208ENST00000443046 DCP1BQ8IZD4 617 aaKnown RBP15.54■□□□□ 0.08
HMGN1-208ENST00000443046 CPA6Q8N4T0 437 aa15.54■□□□□ 0.08
HMGN1-208ENST00000443046 MRPS31Q92665 395 aaKnown RBP15.54■□□□□ 0.08
HMGN1-208ENST00000443046 TRMT2BQ96GJ1 504 aaKnown RBP15.54■□□□□ 0.08
HMGN1-208ENST00000443046 MYRFLQ96LU7 910 aa15.54■□□□□ 0.08
HMGN1-208ENST00000443046 MSTO1Q9BUK6 570 aa15.54■□□□□ 0.08
HMGN1-208ENST00000443046 DUS2Q9NX74 493 aaKnown RBP15.54■□□□□ 0.08
HMGN1-208ENST00000443046 ABI2Q9NYB9 513 aaPredicted RBP15.54■□□□□ 0.08
HMGN1-208ENST00000443046 C2CD2Q9Y426 696 aa15.54■□□□□ 0.08
HMGN1-208ENST00000443046 PCDHB5Q9Y5E4 795 aa15.54■□□□□ 0.08
HMGN1-208ENST00000443046 TNRC6BQ9UPQ9 1833 aaKnown RBP15.54■□□□□ 0.08
HMGN1-208ENST00000443046 K7EQS6 105 aa15.53■□□□□ 0.08
HMGN1-208ENST00000443046 NOL4O94818 638 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms