RNA–Protein interactions for RNA: ENST00000442510.6

PTPRC-209, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRC, Length 5,164 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-209ENST00000442510 ME3Q16798 604 aa5.82□□□□□ -1.48
PTPRC-209ENST00000442510 ATP13A4Q4VNC1 1196 aa5.82□□□□□ -1.48
PTPRC-209ENST00000442510 ARSKQ6UWY0 536 aa5.82□□□□□ -1.48
PTPRC-209ENST00000442510 ARHGAP36Q6ZRI8 547 aa5.82□□□□□ -1.48
PTPRC-209ENST00000442510 ERI1Q8IV48 349 aaKnown RBP5.82□□□□□ -1.48
PTPRC-209ENST00000442510 GRAMD1CQ8IYS0 662 aa5.82□□□□□ -1.48
PTPRC-209ENST00000442510 CCDC116Q8IYX3 515 aa5.82□□□□□ -1.48
PTPRC-209ENST00000442510 ZBED8Q8IZ13 594 aa5.82□□□□□ -1.48
PTPRC-209ENST00000442510 CLEC4FQ8N1N0 589 aa5.82□□□□□ -1.48
PTPRC-209ENST00000442510 RTL3Q8N8U3 475 aaKnown RBP5.82□□□□□ -1.48
PTPRC-209ENST00000442510 SLAIN1Q8ND83 568 aa5.82□□□□□ -1.48
PTPRC-209ENST00000442510 OR6Y1Q8NGX8 325 aa5.82□□□□□ -1.48
PTPRC-209ENST00000442510 SCFD1Q8WVM8 642 aa5.82□□□□□ -1.48
PTPRC-209ENST00000442510 PPP1R36Q96LQ0 422 aa5.82□□□□□ -1.48
PTPRC-209ENST00000442510 DHRS9Q9BPW9 319 aa5.82□□□□□ -1.48
PTPRC-209ENST00000442510 OR2B2Q9GZK3 357 aa5.82□□□□□ -1.48
PTPRC-209ENST00000442510 DNAJC18Q9H819 358 aa5.82□□□□□ -1.48
PTPRC-209ENST00000442510 TMBIM4Q9HC24 238 aa5.82□□□□□ -1.48
PTPRC-209ENST00000442510 NLRC4Q9NPP4 1024 aa5.82□□□□□ -1.48
PTPRC-209ENST00000442510 MROH7Q68CQ1 1323 aa5.82□□□□□ -1.48
PTPRC-209ENST00000442510 ARHGAP35Q9NRY4 1499 aa5.82□□□□□ -1.48
PTPRC-209ENST00000442510 MEI4A8MW99 385 aa5.82□□□□□ -1.48
PTPRC-209ENST00000442510 HUS1O60921 280 aa5.82□□□□□ -1.48
PTPRC-209ENST00000442510 TFPTP0C1Z6 253 aa5.82□□□□□ -1.48
PTPRC-209ENST00000442510 PMLP29590 882 aa5.82□□□□□ -1.48
PTPRC-209ENST00000442510 CD79BP40259 229 aa5.82□□□□□ -1.48
PTPRC-209ENST00000442510 POLD2P49005 469 aa5.82□□□□□ -1.48
PTPRC-209ENST00000442510 GFPT1Q06210 699 aaPredicted RBP5.82□□□□□ -1.48
PTPRC-209ENST00000442510 IFRD2Q12894 506 aaPredicted RBP5.82□□□□□ -1.48
PTPRC-209ENST00000442510 RRS1Q15050 365 aaKnown RBP5.82□□□□□ -1.48
PTPRC-209ENST00000442510 CCDC85BQ15834 202 aaPredicted RBP5.82□□□□□ -1.48
PTPRC-209ENST00000442510 CARTPTQ16568 116 aa5.82□□□□□ -1.48
PTPRC-209ENST00000442510 HSD17B12Q53GQ0 312 aa5.82□□□□□ -1.48
PTPRC-209ENST00000442510 HP1BP3Q5SSJ5 553 aaPredicted RBP5.82□□□□□ -1.48
PTPRC-209ENST00000442510 ZNF804AQ7Z570 1209 aa5.82□□□□□ -1.48
PTPRC-209ENST00000442510 CCDC71Q8IV32 467 aaPredicted RBP5.82□□□□□ -1.48
PTPRC-209ENST00000442510 USP38Q8NB14 1042 aa5.82□□□□□ -1.48
PTPRC-209ENST00000442510 TSPAN14Q8NG11 270 aa5.82□□□□□ -1.48
PTPRC-209ENST00000442510 UBASH3BQ8TF42 649 aa5.82□□□□□ -1.48
PTPRC-209ENST00000442510 AFG1LQ8WV93 481 aa5.82□□□□□ -1.48
PTPRC-209ENST00000442510 MSANTD3Q96H12 275 aa5.82□□□□□ -1.48
PTPRC-209ENST00000442510 PPP1R2P1Q96PQ5 205 aa5.82□□□□□ -1.48
PTPRC-209ENST00000442510 PFDN5Q99471 154 aa5.82□□□□□ -1.48
PTPRC-209ENST00000442510 C6orf62Q9GZU0 229 aaPredicted RBP5.82□□□□□ -1.48
PTPRC-209ENST00000442510 NTN4Q9HB63 628 aa5.82□□□□□ -1.48
PTPRC-209ENST00000442510 CAPN10Q9HC96 672 aa5.82□□□□□ -1.48
PTPRC-209ENST00000442510 SPG7Q9UQ90 795 aa5.82□□□□□ -1.48
PTPRC-209ENST00000442510 LRRC42Q9Y546 428 aa5.82□□□□□ -1.48
PTPRC-209ENST00000442510 PCDHGA1Q9Y5H4 931 aa5.82□□□□□ -1.48
PTPRC-209ENST00000442510 ORC6Q9Y5N6 252 aa5.82□□□□□ -1.48
PTPRC-209ENST00000442510 TEX51A0A1B0GUA7 166 aa5.82□□□□□ -1.48
PTPRC-209ENST00000442510 PRR23D1E9PI22 279 aaPredicted RBP5.82□□□□□ -1.48
PTPRC-209ENST00000442510 SPAG6O75602 509 aa5.82□□□□□ -1.48
PTPRC-209ENST00000442510 PLEKHA8P1O95397 391 aa5.82□□□□□ -1.48
PTPRC-209ENST00000442510 MED26O95402 600 aa5.82□□□□□ -1.48
PTPRC-209ENST00000442510 PRR23D2P0DMB1 279 aaPredicted RBP5.82□□□□□ -1.48
PTPRC-209ENST00000442510 M6PRP20645 277 aa5.82□□□□□ -1.48
PTPRC-209ENST00000442510 ATP2B4P23634 1241 aa5.82□□□□□ -1.48
PTPRC-209ENST00000442510 YWHABP31946 246 aaKnown RBP5.82□□□□□ -1.48
PTPRC-209ENST00000442510 YAP1P46937 504 aaKnown RBP5.82□□□□□ -1.48
PTPRC-209ENST00000442510 KCNJ5P48544 419 aa5.82□□□□□ -1.48
PTPRC-209ENST00000442510 NCKAP1LP55160 1127 aa5.82□□□□□ -1.48
PTPRC-209ENST00000442510 NFX1Q12986 1120 aaKnown RBP5.82□□□□□ -1.48
PTPRC-209ENST00000442510 PARP6Q2NL67 630 aa5.82□□□□□ -1.48
PTPRC-209ENST00000442510 CAVIN4Q5BKX8 364 aa5.82□□□□□ -1.48
PTPRC-209ENST00000442510 PRR5LQ6MZQ0 368 aa5.82□□□□□ -1.48
PTPRC-209ENST00000442510 RINT1Q6NUQ1 792 aa5.82□□□□□ -1.48
PTPRC-209ENST00000442510 KDELC1Q6UW63 502 aa5.82□□□□□ -1.48
PTPRC-209ENST00000442510 UBE3BQ7Z3V4 1068 aa5.82□□□□□ -1.48
PTPRC-209ENST00000442510 PROSER2Q86WR7 435 aaPredicted RBP5.82□□□□□ -1.48
PTPRC-209ENST00000442510 PIK3C3Q8NEB9 887 aa5.82□□□□□ -1.48
PTPRC-209ENST00000442510 PTCD2Q8WV60 388 aaKnown RBP5.82□□□□□ -1.48
PTPRC-209ENST00000442510 TMEM87BQ96K49 555 aa5.82□□□□□ -1.48
PTPRC-209ENST00000442510 TM9SF2Q99805 663 aa5.82□□□□□ -1.48
PTPRC-209ENST00000442510 VPS33BQ9H267 617 aa5.82□□□□□ -1.48
PTPRC-209ENST00000442510 NDST4Q9H3R1 872 aa5.82□□□□□ -1.48
PTPRC-209ENST00000442510 LY9Q9HBG7 655 aa5.82□□□□□ -1.48
PTPRC-209ENST00000442510 STRN4Q9NRL3 753 aa5.82□□□□□ -1.48
PTPRC-209ENST00000442510 MCM9Q9NXL9 1143 aa5.82□□□□□ -1.48
PTPRC-209ENST00000442510 TAB2Q9NYJ8 693 aa5.82□□□□□ -1.48
PTPRC-209ENST00000442510 IPO11Q9UI26 975 aaKnown RBP5.82□□□□□ -1.48
PTPRC-209ENST00000442510 ZDHHC9Q9Y397 364 aa5.82□□□□□ -1.48
PTPRC-209ENST00000442510 ARHGEF35A5YM69 484 aa5.82□□□□□ -1.48
PTPRC-209ENST00000442510 UBAP1LF5GYI3 381 aa5.82□□□□□ -1.48
PTPRC-209ENST00000442510 CCDC188H7C350 402 aa5.82□□□□□ -1.48
PTPRC-209ENST00000442510 PGRMC1O00264 195 aaKnown RBP5.82□□□□□ -1.48
PTPRC-209ENST00000442510 ENTPD5O75356 428 aa5.82□□□□□ -1.48
PTPRC-209ENST00000442510 PRPF6O94906 941 aaKnown RBP5.82□□□□□ -1.48
PTPRC-209ENST00000442510 UNC5CO95185 931 aa5.82□□□□□ -1.48
PTPRC-209ENST00000442510 ATP5BP06576 529 aaKnown RBP5.82□□□□□ -1.48
PTPRC-209ENST00000442510 NPR3P17342 541 aa5.82□□□□□ -1.48
PTPRC-209ENST00000442510 ARF4P18085 180 aaPredicted RBP5.82□□□□□ -1.48
PTPRC-209ENST00000442510 ALAS2P22557 587 aa5.82□□□□□ -1.48
PTPRC-209ENST00000442510 PSMD4P55036 377 aaKnown RBP5.82□□□□□ -1.48
PTPRC-209ENST00000442510 NCALDP61601 193 aa5.82□□□□□ -1.48
PTPRC-209ENST00000442510 HTRA4P83105 476 aaPredicted RBP5.82□□□□□ -1.48
PTPRC-209ENST00000442510 TMED2Q15363 201 aa5.82□□□□□ -1.48
PTPRC-209ENST00000442510 ZNF544Q6NX49 715 aa5.82□□□□□ -1.48
PTPRC-209ENST00000442510 AHI1Q8N157 1196 aa5.82□□□□□ -1.48
PTPRC-209ENST00000442510 SSH1Q8WYL5 1049 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms