RNA–Protein interactions for RNA: ENST00000441123.1

BRPF3-203, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 1 (best)

Gene BRPF3, Length 5,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-203ENST00000441123 MRIQ9BWK5 157 aa13.45□□□□□ -0.26
BRPF3-203ENST00000441123 MRPL46Q9H2W6 279 aaKnown RBP13.45□□□□□ -0.26
BRPF3-203ENST00000441123 PCDHA3Q9Y5H8 950 aa13.45□□□□□ -0.26
BRPF3-203ENST00000441123 SIGLEC1Q9BZZ2 1709 aa13.45□□□□□ -0.26
BRPF3-203ENST00000441123 CAND2O75155 1236 aa13.45□□□□□ -0.26
BRPF3-203ENST00000441123 ACADSP16219 412 aa13.45□□□□□ -0.26
BRPF3-203ENST00000441123 OCA2Q04671 838 aa13.45□□□□□ -0.26
BRPF3-203ENST00000441123 EZH2Q15910 746 aaKnown RBP13.45□□□□□ -0.26
BRPF3-203ENST00000441123 TMC3Q7Z5M5 1100 aa13.45□□□□□ -0.26
BRPF3-203ENST00000441123 DNERQ8NFT8 737 aa13.45□□□□□ -0.26
BRPF3-203ENST00000441123 ING2Q9H160 280 aa13.45□□□□□ -0.26
BRPF3-203ENST00000441123 ARHGEF38Q9NXL2 777 aa13.45□□□□□ -0.26
BRPF3-203ENST00000441123 RNF103-CHMP3A0A140T963 221 aa13.44□□□□□ -0.26
BRPF3-203ENST00000441123 VHLP40337 213 aa13.44□□□□□ -0.26
BRPF3-203ENST00000441123 OTOP1Q7RTM1 612 aa13.44□□□□□ -0.26
BRPF3-203ENST00000441123 AFG1LQ8WV93 481 aa13.44□□□□□ -0.26
BRPF3-203ENST00000441123 PTPRN2Q92932 1015 aa13.44□□□□□ -0.26
BRPF3-203ENST00000441123 ULK4Q96C45 1275 aa13.44□□□□□ -0.26
BRPF3-203ENST00000441123 ZNF668Q96K58 619 aaPredicted RBP13.44□□□□□ -0.26
BRPF3-203ENST00000441123 OSGEPQ9NPF4 335 aa13.44□□□□□ -0.26
BRPF3-203ENST00000441123 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.44□□□□□ -0.26
BRPF3-203ENST00000441123 GGT7Q9UJ14 662 aa13.44□□□□□ -0.26
BRPF3-203ENST00000441123 INPP1P49441 399 aa13.44□□□□□ -0.26
BRPF3-203ENST00000441123 SNX17Q15036 470 aa13.44□□□□□ -0.26
BRPF3-203ENST00000441123 NT5DC3Q86UY8 548 aa13.44□□□□□ -0.26
BRPF3-203ENST00000441123 OR6P1Q8NGX9 317 aa13.44□□□□□ -0.26
BRPF3-203ENST00000441123 SPATA20Q8TB22 786 aa13.44□□□□□ -0.26
BRPF3-203ENST00000441123 ACER1Q8TDN7 264 aa13.44□□□□□ -0.26
BRPF3-203ENST00000441123 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.44□□□□□ -0.26
BRPF3-203ENST00000441123 SHOC2Q9UQ13 582 aa13.44□□□□□ -0.26
BRPF3-203ENST00000441123 MRC1P22897 1456 aa13.44□□□□□ -0.26
BRPF3-203ENST00000441123 TMEM247A6NEH6 219 aa13.44□□□□□ -0.26
BRPF3-203ENST00000441123 HSPA13P48723 471 aa13.44□□□□□ -0.26
BRPF3-203ENST00000441123 USP10Q14694 798 aaKnown RBP13.44□□□□□ -0.26
BRPF3-203ENST00000441123 ABRAQ8N0Z2 381 aa13.44□□□□□ -0.26
BRPF3-203ENST00000441123 MKL1Q969V6 931 aa13.44□□□□□ -0.26
BRPF3-203ENST00000441123 PGM2Q96G03 612 aa13.44□□□□□ -0.26
BRPF3-203ENST00000441123 PARK7Q99497 189 aaKnown RBP13.44□□□□□ -0.26
BRPF3-203ENST00000441123 PCDH9Q9HC56 1237 aa13.44□□□□□ -0.26
BRPF3-203ENST00000441123 DPP3Q9NY33 737 aa13.44□□□□□ -0.26
BRPF3-203ENST00000441123 NID2Q14112 1375 aa13.44□□□□□ -0.26
BRPF3-203ENST00000441123 FMN2Q9NZ56 1722 aa13.44□□□□□ -0.26
BRPF3-203ENST00000441123 PIK3CDO00329 1044 aa13.44□□□□□ -0.26
BRPF3-203ENST00000441123 RIPK2O43353 540 aa13.44□□□□□ -0.26
BRPF3-203ENST00000441123 KLRC4O43908 158 aa13.44□□□□□ -0.26
BRPF3-203ENST00000441123 TAF6P49848 677 aa13.44□□□□□ -0.26
BRPF3-203ENST00000441123 ILF2Q12905 390 aaKnown RBP13.44□□□□□ -0.26
BRPF3-203ENST00000441123 LRRC8EQ6NSJ5 796 aa13.44□□□□□ -0.26
BRPF3-203ENST00000441123 MCOLN2Q8IZK6 566 aa13.44□□□□□ -0.26
BRPF3-203ENST00000441123 ELMOD1Q8N336 334 aa13.44□□□□□ -0.26
BRPF3-203ENST00000441123 MREGQ8N565 214 aa13.44□□□□□ -0.26
BRPF3-203ENST00000441123 TRIM54Q9BYV2 358 aa13.44□□□□□ -0.26
BRPF3-203ENST00000441123 DEFB129Q9H1M3 183 aa13.44□□□□□ -0.26
BRPF3-203ENST00000441123 TRPC5OSA6NMA1 111 aa13.43□□□□□ -0.26
BRPF3-203ENST00000441123 ANGPT2O15123 496 aa13.43□□□□□ -0.26
BRPF3-203ENST00000441123 SLITRK3O94933 977 aa13.43□□□□□ -0.26
BRPF3-203ENST00000441123 ATP5BP06576 529 aaKnown RBP13.43□□□□□ -0.26
BRPF3-203ENST00000441123 HNRNPH3P31942 346 aaKnown RBP13.43□□□□□ -0.26
BRPF3-203ENST00000441123 HDAC4P56524 1084 aa13.43□□□□□ -0.26
BRPF3-203ENST00000441123 RBBP7Q16576 425 aa13.43□□□□□ -0.26
BRPF3-203ENST00000441123 CYP4A22Q5TCH4 519 aa13.43□□□□□ -0.26
BRPF3-203ENST00000441123 ANGEL2Q5VTE6 544 aaKnown RBP13.43□□□□□ -0.26
BRPF3-203ENST00000441123 FBXO25Q8TCJ0 367 aa13.43□□□□□ -0.26
BRPF3-203ENST00000441123 DCLK3Q9C098 648 aa13.43□□□□□ -0.26
BRPF3-203ENST00000441123 KCNMB3Q9NPA1 279 aa13.43□□□□□ -0.26
BRPF3-203ENST00000441123 ARHGAP26Q9UNA1 814 aa13.43□□□□□ -0.26
BRPF3-203ENST00000441123 ZBTB12Q9Y330 459 aaPredicted RBP13.43□□□□□ -0.26
BRPF3-203ENST00000441123 F5H423 210 aaPredicted RBP13.43□□□□□ -0.26
BRPF3-203ENST00000441123 E2F6O75461 281 aa13.43□□□□□ -0.26
BRPF3-203ENST00000441123 DDX5P17844 614 aaKnown RBP13.43□□□□□ -0.26
BRPF3-203ENST00000441123 GNL1P36915 607 aaPredicted RBP13.43□□□□□ -0.26
BRPF3-203ENST00000441123 RECQLP46063 649 aaPredicted RBP13.43□□□□□ -0.26
BRPF3-203ENST00000441123 BACE1P56817 501 aa13.43□□□□□ -0.26
BRPF3-203ENST00000441123 DGKDQ16760 1214 aa13.43□□□□□ -0.26
BRPF3-203ENST00000441123 HOMEZQ8IX15 550 aa13.43□□□□□ -0.26
BRPF3-203ENST00000441123 PCYOX1LQ8NBM8 494 aa13.43□□□□□ -0.26
BRPF3-203ENST00000441123 SLC20A1Q8WUM9 679 aa13.43□□□□□ -0.26
BRPF3-203ENST00000441123 PRMT6Q96LA8 375 aaPredicted RBP13.43□□□□□ -0.26
BRPF3-203ENST00000441123 TASP1Q9H6P5 420 aa13.43□□□□□ -0.26
BRPF3-203ENST00000441123 CACNA1FO60840 1977 aa13.43□□□□□ -0.26
BRPF3-203ENST00000441123 B2RBV5 119 aa13.43□□□□□ -0.26
BRPF3-203ENST00000441123 SRP72O76094 671 aaKnown RBP13.43□□□□□ -0.26
BRPF3-203ENST00000441123 ITGB3P05106 788 aa13.43□□□□□ -0.26
BRPF3-203ENST00000441123 TGM2P21980 687 aa13.43□□□□□ -0.26
BRPF3-203ENST00000441123 PTK6Q13882 451 aa13.43□□□□□ -0.26
BRPF3-203ENST00000441123 CHI3L2Q15782 390 aa13.43□□□□□ -0.26
BRPF3-203ENST00000441123 RABGAP1LQ5R372 815 aa13.43□□□□□ -0.26
BRPF3-203ENST00000441123 LRRC6Q86X45 466 aa13.43□□□□□ -0.26
BRPF3-203ENST00000441123 SIK2Q9H0K1 926 aa13.43□□□□□ -0.26
BRPF3-203ENST00000441123 TJP2Q9UDY2 1190 aa13.43□□□□□ -0.26
BRPF3-203ENST00000441123 NCANO14594 1321 aa13.43□□□□□ -0.26
BRPF3-203ENST00000441123 TRIM49D1C9J1S8 452 aa13.43□□□□□ -0.26
BRPF3-203ENST00000441123 EPC2Q52LR7 807 aa13.43□□□□□ -0.26
BRPF3-203ENST00000441123 SLC47A2Q86VL8 602 aa13.43□□□□□ -0.26
BRPF3-203ENST00000441123 DDIASQ8IXT1 998 aa13.43□□□□□ -0.26
BRPF3-203ENST00000441123 FBXO36Q8NEA4 188 aa13.43□□□□□ -0.26
BRPF3-203ENST00000441123 SYTL5Q8TDW5 730 aaPredicted RBP13.43□□□□□ -0.26
BRPF3-203ENST00000441123 PARD3BQ8TEW8 1205 aa13.43□□□□□ -0.26
BRPF3-203ENST00000441123 CENPTQ96BT3 561 aa13.43□□□□□ -0.26
BRPF3-203ENST00000441123 ELMO2Q96JJ3 720 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms