RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 SLC5A5Q92911 643 aa12.52□□□□□ -0.41
LTBR-203ENST00000441074 DYDC2Q96IM9 177 aa12.52□□□□□ -0.41
LTBR-203ENST00000441074 HERPUD2Q9BSE4 406 aa12.52□□□□□ -0.41
LTBR-203ENST00000441074 WDR11Q9BZH6 1224 aa12.52□□□□□ -0.41
LTBR-203ENST00000441074 SLC38A10Q9HBR0 1119 aa12.52□□□□□ -0.41
LTBR-203ENST00000441074 TAS2R1Q9NYW7 299 aa12.52□□□□□ -0.41
LTBR-203ENST00000441074 HEY2Q9UBP5 337 aa12.52□□□□□ -0.41
LTBR-203ENST00000441074 TBC1D30Q9Y2I9 924 aa12.52□□□□□ -0.41
LTBR-203ENST00000441074 R3HDM2Q9Y2K5 976 aaKnown RBP12.52□□□□□ -0.41
LTBR-203ENST00000441074 BRCA2P51587 3418 aa12.52□□□□□ -0.41
LTBR-203ENST00000441074 F8W8V4 182 aa12.51□□□□□ -0.41
LTBR-203ENST00000441074 VWA5AO00534 786 aa12.51□□□□□ -0.41
LTBR-203ENST00000441074 ZBED4O75132 1171 aa12.51□□□□□ -0.41
LTBR-203ENST00000441074 SLITRK3O94933 977 aa12.51□□□□□ -0.41
LTBR-203ENST00000441074 RAP1GDS1P52306 607 aa12.51□□□□□ -0.41
LTBR-203ENST00000441074 CCNG2Q16589 344 aa12.51□□□□□ -0.41
LTBR-203ENST00000441074 NSMFQ6X4W1 530 aa12.51□□□□□ -0.41
LTBR-203ENST00000441074 LCA5Q86VQ0 697 aa12.51□□□□□ -0.41
LTBR-203ENST00000441074 RBM12BQ8IXT5 1001 aaKnown RBP12.51□□□□□ -0.41
LTBR-203ENST00000441074 FAM71AQ8IYT1 594 aa12.51□□□□□ -0.41
LTBR-203ENST00000441074 PDCD7Q8N8D1 485 aaKnown RBP12.51□□□□□ -0.41
LTBR-203ENST00000441074 LPAR1Q92633 364 aa12.51□□□□□ -0.41
LTBR-203ENST00000441074 OLFM3Q96PB7 478 aa12.51□□□□□ -0.41
LTBR-203ENST00000441074 DDX50Q9BQ39 737 aaKnown RBP12.51□□□□□ -0.41
LTBR-203ENST00000441074 SAYSD1Q9NPB0 183 aa12.51□□□□□ -0.41
LTBR-203ENST00000441074 DCTN4Q9UJW0 460 aa12.51□□□□□ -0.41
LTBR-203ENST00000441074 TOMM70O94826 608 aa12.51□□□□□ -0.41
LTBR-203ENST00000441074 ZCCHC18P0CG32 403 aa12.51□□□□□ -0.41
LTBR-203ENST00000441074 MAPTP10636 758 aaKnown RBP12.51□□□□□ -0.41
LTBR-203ENST00000441074 CDK7P50613 346 aa12.51□□□□□ -0.41
LTBR-203ENST00000441074 NEK3P51956 506 aa12.51□□□□□ -0.41
LTBR-203ENST00000441074 RTP1P59025 263 aa12.51□□□□□ -0.41
LTBR-203ENST00000441074 FMO1Q01740 532 aa12.51□□□□□ -0.41
LTBR-203ENST00000441074 THOC5Q13769 683 aaKnown RBP12.51□□□□□ -0.41
LTBR-203ENST00000441074 EPC2Q52LR7 807 aa12.51□□□□□ -0.41
LTBR-203ENST00000441074 ODR4Q5SWX8 454 aa12.51□□□□□ -0.41
LTBR-203ENST00000441074 TREML2Q5T2D2 321 aa12.51□□□□□ -0.41
LTBR-203ENST00000441074 PCNX4Q63HM2 1172 aa12.51□□□□□ -0.41
LTBR-203ENST00000441074 KSR1Q8IVT5 923 aa12.51□□□□□ -0.41
LTBR-203ENST00000441074 TUBGCP5Q96RT8 1024 aa12.51□□□□□ -0.41
LTBR-203ENST00000441074 STRA6Q9BX79 667 aa12.51□□□□□ -0.41
LTBR-203ENST00000441074 TRIM55Q9BYV6 548 aa12.51□□□□□ -0.41
LTBR-203ENST00000441074 MIS12Q9H081 205 aa12.51□□□□□ -0.41
LTBR-203ENST00000441074 OCEL1Q9H607 264 aa12.51□□□□□ -0.41
LTBR-203ENST00000441074 SLC24A2Q9UI40 661 aa12.51□□□□□ -0.41
LTBR-203ENST00000441074 MTO1Q9Y2Z2 717 aaKnown RBP12.51□□□□□ -0.41
LTBR-203ENST00000441074 MRPL11Q9Y3B7 192 aaKnown RBP12.51□□□□□ -0.41
LTBR-203ENST00000441074 RPS6KL1Q9Y6S9 549 aa12.51□□□□□ -0.41
LTBR-203ENST00000441074 WASF2Q9Y6W5 498 aa12.51□□□□□ -0.41
LTBR-203ENST00000441074 RBBP6Q7Z6E9 1792 aaKnown RBP12.51□□□□□ -0.41
LTBR-203ENST00000441074 EMSYQ7Z589 1322 aa12.51□□□□□ -0.41
LTBR-203ENST00000441074 RARBP10826 455 aa12.5□□□□□ -0.41
LTBR-203ENST00000441074 ESRRAP11474 423 aaPredicted RBP12.5□□□□□ -0.41
LTBR-203ENST00000441074 PLS3P13797 630 aa12.5□□□□□ -0.41
LTBR-203ENST00000441074 ITGB5P18084 799 aa12.5□□□□□ -0.41
LTBR-203ENST00000441074 EIF2AK2P19525 551 aaKnown RBP12.5□□□□□ -0.41
LTBR-203ENST00000441074 KLRC2P26717 231 aa12.5□□□□□ -0.41
LTBR-203ENST00000441074 ADSSP30520 456 aa12.5□□□□□ -0.41
LTBR-203ENST00000441074 RPS6P62753 249 aaKnown RBP12.5□□□□□ -0.41
LTBR-203ENST00000441074 DSG1Q02413 1049 aa12.5□□□□□ -0.41
LTBR-203ENST00000441074 CCDC142Q17RM4 750 aa12.5□□□□□ -0.41
LTBR-203ENST00000441074 CCDC62Q6P9F0 684 aa12.5□□□□□ -0.41
LTBR-203ENST00000441074 C12orf56Q8IXR9 622 aa12.5□□□□□ -0.41
LTBR-203ENST00000441074 SYCP3Q8IZU3 236 aa12.5□□□□□ -0.41
LTBR-203ENST00000441074 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.5□□□□□ -0.41
LTBR-203ENST00000441074 SKA1Q96BD8 255 aa12.5□□□□□ -0.41
LTBR-203ENST00000441074 TAAR1Q96RJ0 339 aa12.5□□□□□ -0.41
LTBR-203ENST00000441074 OSBPL8Q9BZF1 889 aa12.5□□□□□ -0.41
LTBR-203ENST00000441074 TMEM206Q9H813 350 aa12.5□□□□□ -0.41
LTBR-203ENST00000441074 A0A1W2PPM1 405 aa12.5□□□□□ -0.41
LTBR-203ENST00000441074 PMM2O15305 246 aa12.5□□□□□ -0.41
LTBR-203ENST00000441074 MAGEC1O60732 1142 aa12.5□□□□□ -0.41
LTBR-203ENST00000441074 GAS7O60861 476 aa12.5□□□□□ -0.41
LTBR-203ENST00000441074 PGM1P36871 562 aa12.5□□□□□ -0.41
LTBR-203ENST00000441074 SLC1A1P43005 524 aa12.5□□□□□ -0.41
LTBR-203ENST00000441074 ARFIP2P53365 341 aa12.5□□□□□ -0.41
LTBR-203ENST00000441074 CDK16Q00536 496 aa12.5□□□□□ -0.41
LTBR-203ENST00000441074 USP4Q13107 963 aa12.5□□□□□ -0.41
LTBR-203ENST00000441074 KLF1Q13351 362 aaPredicted RBP12.5□□□□□ -0.41
LTBR-203ENST00000441074 ZNF276Q8N554 614 aa12.5□□□□□ -0.41
LTBR-203ENST00000441074 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.5□□□□□ -0.41
LTBR-203ENST00000441074 IWS1Q96ST2 819 aa12.5□□□□□ -0.41
LTBR-203ENST00000441074 ECSITQ9BQ95 431 aa12.5□□□□□ -0.41
LTBR-203ENST00000441074 LBHD1Q9BQE6 289 aaPredicted RBP12.5□□□□□ -0.41
LTBR-203ENST00000441074 MAK16Q9BXY0 300 aaKnown RBP12.5□□□□□ -0.41
LTBR-203ENST00000441074 R3HDMLQ9H3Y0 253 aa12.5□□□□□ -0.41
LTBR-203ENST00000441074 ELP3Q9H9T3 547 aa12.5□□□□□ -0.41
LTBR-203ENST00000441074 PSMC3IPQ9P2W1 217 aaPredicted RBP12.5□□□□□ -0.41
LTBR-203ENST00000441074 DNAJB4Q9UDY4 337 aa12.5□□□□□ -0.41
LTBR-203ENST00000441074 SNCAIPQ9Y6H5 919 aa12.5□□□□□ -0.41
LTBR-203ENST00000441074 A0A0G2JND7 137 aa12.49□□□□□ -0.41
LTBR-203ENST00000441074 PLA2G6O60733 806 aa12.49□□□□□ -0.41
LTBR-203ENST00000441074 ANPEPP15144 967 aa12.49□□□□□ -0.41
LTBR-203ENST00000441074 CRABP2P29373 138 aa12.49□□□□□ -0.41
LTBR-203ENST00000441074 MAPK4P31152 587 aa12.49□□□□□ -0.41
LTBR-203ENST00000441074 ZBTB16Q05516 673 aa12.49□□□□□ -0.41
LTBR-203ENST00000441074 OVGP1Q12889 678 aa12.49□□□□□ -0.41
LTBR-203ENST00000441074 MYBPC3Q14896 1274 aa12.49□□□□□ -0.41
LTBR-203ENST00000441074 FAM91A1Q658Y4 838 aa12.49□□□□□ -0.41
LTBR-203ENST00000441074 IZUMO2Q6UXV1 221 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms