RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 TFAP2BQ92481 460 aa21.99■■□□□ 1.11
CHD3-204ENST00000439235 VN1R3Q9BXE9 311 aa21.99■■□□□ 1.11
CHD3-204ENST00000439235 CHST7Q9NS84 486 aa21.99■■□□□ 1.11
CHD3-204ENST00000439235 FAM49BQ9NUQ9 324 aa21.99■■□□□ 1.11
CHD3-204ENST00000439235 ADAMTS1Q9UHI8 967 aa21.99■■□□□ 1.11
CHD3-204ENST00000439235 MSRAQ9UJ68 235 aa21.99■■□□□ 1.11
CHD3-204ENST00000439235 PCDHGC3Q9UN70 934 aa21.99■■□□□ 1.11
CHD3-204ENST00000439235 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.99■■□□□ 1.11
CHD3-204ENST00000439235 EPN1Q9Y6I3 576 aaPredicted RBP21.99■■□□□ 1.11
CHD3-204ENST00000439235 EIF3CLB5ME19 914 aaKnown RBP21.98■■□□□ 1.11
CHD3-204ENST00000439235 DDX3XO00571 662 aaKnown RBP eCLIP21.98■■□□□ 1.11
CHD3-204ENST00000439235 URODP06132 367 aa21.98■■□□□ 1.11
CHD3-204ENST00000439235 RB1P06400 928 aa21.98■■□□□ 1.11
CHD3-204ENST00000439235 MYOGP15173 224 aa21.98■■□□□ 1.11
CHD3-204ENST00000439235 MTF1Q14872 753 aa21.98■■□□□ 1.11
CHD3-204ENST00000439235 SPA17Q15506 151 aa21.98■■□□□ 1.11
CHD3-204ENST00000439235 MDH1BQ5I0G3 518 aa21.98■■□□□ 1.11
CHD3-204ENST00000439235 TAS1R1Q7RTX1 841 aa21.98■■□□□ 1.11
CHD3-204ENST00000439235 GPR65Q8IYL9 337 aa21.98■■□□□ 1.11
CHD3-204ENST00000439235 DCP1BQ8IZD4 617 aaKnown RBP21.98■■□□□ 1.11
CHD3-204ENST00000439235 KLHL23Q8NBE8 558 aa21.98■■□□□ 1.11
CHD3-204ENST00000439235 OR10T2Q8NGX3 314 aa21.98■■□□□ 1.11
CHD3-204ENST00000439235 LNX1Q8TBB1 728 aaPredicted RBP21.98■■□□□ 1.11
CHD3-204ENST00000439235 RIN2Q8WYP3 895 aaPredicted RBP21.98■■□□□ 1.11
CHD3-204ENST00000439235 B3GALT6Q96L58 329 aa21.98■■□□□ 1.11
CHD3-204ENST00000439235 EIF3CQ99613 913 aaKnown RBP21.98■■□□□ 1.11
CHD3-204ENST00000439235 ZSWIM1Q9BR11 485 aa21.98■■□□□ 1.11
CHD3-204ENST00000439235 LUC7LQ9NQ29 371 aaKnown RBP21.98■■□□□ 1.11
CHD3-204ENST00000439235 HESX1Q9UBX0 185 aa21.98■■□□□ 1.11
CHD3-204ENST00000439235 LZTS1Q9Y250 596 aa21.98■■□□□ 1.11
CHD3-204ENST00000439235 A0A087X0T9 212 aa21.97■■□□□ 1.11
CHD3-204ENST00000439235 C5orf67F2Z3F1 127 aa21.97■■□□□ 1.11
CHD3-204ENST00000439235 LSM8O95777 96 aaKnown RBP21.97■■□□□ 1.11
CHD3-204ENST00000439235 FAM228BP0C875 321 aa21.97■■□□□ 1.11
CHD3-204ENST00000439235 DSG1Q02413 1049 aa21.97■■□□□ 1.11
CHD3-204ENST00000439235 GFPT1Q06210 699 aaPredicted RBP21.97■■□□□ 1.11
CHD3-204ENST00000439235 PSMD5Q16401 504 aa21.97■■□□□ 1.11
CHD3-204ENST00000439235 GOLGA7BQ2TAP0 167 aa21.97■■□□□ 1.11
CHD3-204ENST00000439235 PPP1R2P3Q6NXS1 205 aa21.97■■□□□ 1.11
CHD3-204ENST00000439235 LCLAT1Q6UWP7 414 aa21.97■■□□□ 1.11
CHD3-204ENST00000439235 C12orf29Q8N999 325 aa21.97■■□□□ 1.11
CHD3-204ENST00000439235 SLC30A5Q8TAD4 765 aa21.97■■□□□ 1.11
CHD3-204ENST00000439235 OLIG1Q8TAK6 271 aa21.97■■□□□ 1.11
CHD3-204ENST00000439235 MYCBPAPQ8TBZ2 947 aa21.97■■□□□ 1.11
CHD3-204ENST00000439235 CYFIP2Q96F07 1278 aa21.97■■□□□ 1.11
CHD3-204ENST00000439235 TGS1Q96RS0 853 aaKnown RBP21.97■■□□□ 1.11
CHD3-204ENST00000439235 ZCWPW1Q9H0M4 648 aa21.97■■□□□ 1.11
CHD3-204ENST00000439235 CRTAC1Q9NQ79 661 aa21.97■■□□□ 1.11
CHD3-204ENST00000439235 SPTLC3Q9NUV7 552 aa21.97■■□□□ 1.11
CHD3-204ENST00000439235 MTRRQ9UBK8 725 aa21.97■■□□□ 1.11
CHD3-204ENST00000439235 TSPAN16Q9UKR8 245 aa21.97■■□□□ 1.11
CHD3-204ENST00000439235 SSX2IPQ9Y2D8 614 aa21.97■■□□□ 1.11
CHD3-204ENST00000439235 BACE2Q9Y5Z0 518 aa21.97■■□□□ 1.11
CHD3-204ENST00000439235 ATP8B3O60423 1300 aa21.97■■□□□ 1.11
CHD3-204ENST00000439235 M0QYV0 167 aa21.96■■□□□ 1.11
CHD3-204ENST00000439235 ATP2C2O75185 946 aa21.96■■□□□ 1.11
CHD3-204ENST00000439235 MICAL2O94851 1124 aa21.96■■□□□ 1.11
CHD3-204ENST00000439235 KRT83P78385 493 aa21.96■■□□□ 1.11
CHD3-204ENST00000439235 CREMQ03060 361 aa21.96■■□□□ 1.11
CHD3-204ENST00000439235 UBE3AQ05086 875 aa21.96■■□□□ 1.11
CHD3-204ENST00000439235 PPP1R26Q5T8A7 1209 aaPredicted RBP21.96■■□□□ 1.11
CHD3-204ENST00000439235 KIAA0319Q5VV43 1072 aa21.96■■□□□ 1.11
CHD3-204ENST00000439235 VPS52Q8N1B4 723 aa21.96■■□□□ 1.11
CHD3-204ENST00000439235 HNRNPABQ99729 332 aaKnown RBP21.96■■□□□ 1.11
CHD3-204ENST00000439235 C17orf80Q9BSJ5 609 aa21.96■■□□□ 1.11
CHD3-204ENST00000439235 C11orf84Q9BUA3 381 aaPredicted RBP21.96■■□□□ 1.11
CHD3-204ENST00000439235 PBX4Q9BYU1 374 aa21.96■■□□□ 1.11
CHD3-204ENST00000439235 LHX5Q9H2C1 402 aa21.96■■□□□ 1.11
CHD3-204ENST00000439235 NAGPAQ9UK23 515 aa21.96■■□□□ 1.11
CHD3-204ENST00000439235 YBX2Q9Y2T7 364 aaKnown RBP21.96■■□□□ 1.11
CHD3-204ENST00000439235 MYBPHLA2RUH7 354 aa21.95■■□□□ 1.1
CHD3-204ENST00000439235 LCA5LO95447 670 aa21.95■■□□□ 1.1
CHD3-204ENST00000439235 CYP1A1P04798 512 aaPredicted RBP21.95■■□□□ 1.1
CHD3-204ENST00000439235 CCDC130P13994 396 aa21.95■■□□□ 1.1
CHD3-204ENST00000439235 BCAT1P54687 386 aa21.95■■□□□ 1.1
CHD3-204ENST00000439235 NFE2Q16621 373 aaPredicted RBP21.95■■□□□ 1.1
CHD3-204ENST00000439235 CLEC16AQ2KHT3 1053 aa21.95■■□□□ 1.1
CHD3-204ENST00000439235 C10orf76Q5T2E6 689 aa21.95■■□□□ 1.1
CHD3-204ENST00000439235 ALKBH5Q6P6C2 394 aaKnown RBP21.95■■□□□ 1.1
CHD3-204ENST00000439235 FAM171BQ6P995 826 aa21.95■■□□□ 1.1
CHD3-204ENST00000439235 PRSS55Q6UWB4 352 aaPredicted RBP21.95■■□□□ 1.1
CHD3-204ENST00000439235 C4orf50Q6ZRC1 276 aa21.95■■□□□ 1.1
CHD3-204ENST00000439235 PASD1Q8IV76 773 aa21.95■■□□□ 1.1
CHD3-204ENST00000439235 TMEM35BQ8NCS4 154 aa21.95■■□□□ 1.1
CHD3-204ENST00000439235 SLC2A14Q8TDB8 520 aa21.95■■□□□ 1.1
CHD3-204ENST00000439235 MYLPFQ96A32 169 aa21.95■■□□□ 1.1
CHD3-204ENST00000439235 PCDHB18PQ96TA0 734 aa21.95■■□□□ 1.1
CHD3-204ENST00000439235 PKMYT1Q99640 499 aa21.95■■□□□ 1.1
CHD3-204ENST00000439235 MED10Q9BTT4 135 aa21.95■■□□□ 1.1
CHD3-204ENST00000439235 ZNF518BQ9C0D4 1074 aa21.95■■□□□ 1.1
CHD3-204ENST00000439235 ZBP1Q9H171 429 aa21.95■■□□□ 1.1
CHD3-204ENST00000439235 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.95■■□□□ 1.1
CHD3-204ENST00000439235 GTF3C4Q9UKN8 822 aa21.95■■□□□ 1.1
CHD3-204ENST00000439235 TBC1D4O60343 1298 aa21.94■■□□□ 1.1
CHD3-204ENST00000439235 ARHGEF15O94989 841 aa21.94■■□□□ 1.1
CHD3-204ENST00000439235 SETSIPP0DME0 302 aa21.94■■□□□ 1.1
CHD3-204ENST00000439235 GZMAP12544 262 aa21.94■■□□□ 1.1
CHD3-204ENST00000439235 ADORA2BP29275 332 aa21.94■■□□□ 1.1
CHD3-204ENST00000439235 ERVK-21P61565 698 aa21.94■■□□□ 1.1
CHD3-204ENST00000439235 CYP27A1Q02318 531 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms