RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 PRKAG3Q9UGI9 489 aa16.56■□□□□ 0.24
DHFR-201ENST00000439211 EXOC1LA0A1B0GW35 172 aa16.56■□□□□ 0.24
DHFR-201ENST00000439211 TCRBV7S2A1N4TA0A589 114 aa16.56■□□□□ 0.24
DHFR-201ENST00000439211 DDX3YO15523 660 aaKnown RBP16.56■□□□□ 0.24
DHFR-201ENST00000439211 NAT1P18440 290 aa16.56■□□□□ 0.24
DHFR-201ENST00000439211 CHRNA5P30532 468 aa16.56■□□□□ 0.24
DHFR-201ENST00000439211 MGAT5Q09328 741 aa16.56■□□□□ 0.24
DHFR-201ENST00000439211 DUPD1Q68J44 220 aa16.56■□□□□ 0.24
DHFR-201ENST00000439211 CPNE8Q86YQ8 564 aa16.56■□□□□ 0.24
DHFR-201ENST00000439211 LARGE2Q8N3Y3 721 aa16.56■□□□□ 0.24
DHFR-201ENST00000439211 ICA1LQ8NDH6 482 aa16.56■□□□□ 0.24
DHFR-201ENST00000439211 CADM1Q9BY67 442 aaKnown RBP16.56■□□□□ 0.24
DHFR-201ENST00000439211 RAVER2Q9HCJ3 691 aaKnown RBP16.56■□□□□ 0.24
DHFR-201ENST00000439211 TOPORSQ9NS56 1045 aaPredicted RBP16.56■□□□□ 0.24
DHFR-201ENST00000439211 TTC7AQ9ULT0 858 aaPredicted RBP16.56■□□□□ 0.24
DHFR-201ENST00000439211 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.56■□□□□ 0.24
DHFR-201ENST00000439211 XPOTO43592 962 aaKnown RBP16.56■□□□□ 0.24
DHFR-201ENST00000439211 STRNO43815 780 aa16.56■□□□□ 0.24
DHFR-201ENST00000439211 SNRNP35Q16560 246 aaKnown RBP16.56■□□□□ 0.24
DHFR-201ENST00000439211 WDR72Q3MJ13 1102 aa16.56■□□□□ 0.24
DHFR-201ENST00000439211 RABGAP1LQ5R372 815 aa16.56■□□□□ 0.24
DHFR-201ENST00000439211 DCAF12L1Q5VU92 463 aa16.56■□□□□ 0.24
DHFR-201ENST00000439211 KRT39Q6A163 491 aa16.56■□□□□ 0.24
DHFR-201ENST00000439211 IYDQ6PHW0 289 aa16.56■□□□□ 0.24
DHFR-201ENST00000439211 SLFN11Q7Z7L1 901 aa16.56■□□□□ 0.24
DHFR-201ENST00000439211 NLRX1Q86UT6 975 aa16.56■□□□□ 0.24
DHFR-201ENST00000439211 CCDC124Q96CT7 223 aaKnown RBP16.56■□□□□ 0.24
DHFR-201ENST00000439211 RILPQ96NA2 401 aa16.56■□□□□ 0.24
DHFR-201ENST00000439211 C11orf70Q9BRQ4 267 aa16.56■□□□□ 0.24
DHFR-201ENST00000439211 FAM213AQ9BRX8 229 aa16.56■□□□□ 0.24
DHFR-201ENST00000439211 KLHL11Q9NVR0 708 aa16.56■□□□□ 0.24
DHFR-201ENST00000439211 PTTG2Q9NZH5 202 aa16.56■□□□□ 0.24
DHFR-201ENST00000439211 RBMX2Q9Y388 322 aaKnown RBP16.56■□□□□ 0.24
DHFR-201ENST00000439211 PLIN4Q96Q06 1357 aa16.55■□□□□ 0.24
DHFR-201ENST00000439211 SPTLC1O15269 473 aa16.55■□□□□ 0.24
DHFR-201ENST00000439211 TAC1P20366 129 aa16.55■□□□□ 0.24
DHFR-201ENST00000439211 EPHB1P54762 984 aa16.55■□□□□ 0.24
DHFR-201ENST00000439211 INAQ16352 499 aa16.55■□□□□ 0.24
DHFR-201ENST00000439211 BMT2Q1RMZ1 405 aa16.55■□□□□ 0.24
DHFR-201ENST00000439211 SREK1Q8WXA9 508 aaKnown RBP16.55■□□□□ 0.24
DHFR-201ENST00000439211 ERLEC1Q96DZ1 483 aa16.55■□□□□ 0.24
DHFR-201ENST00000439211 ZNF341Q9BYN7 854 aa16.55■□□□□ 0.24
DHFR-201ENST00000439211 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.55■□□□□ 0.24
DHFR-201ENST00000439211 XIRP1Q702N8 1843 aaKnown RBP16.55■□□□□ 0.24
DHFR-201ENST00000439211 PSMD10O75832 226 aa16.55■□□□□ 0.24
DHFR-201ENST00000439211 ENO1P06733 434 aaKnown RBP16.55■□□□□ 0.24
DHFR-201ENST00000439211 YWHABP31946 246 aaKnown RBP16.55■□□□□ 0.24
DHFR-201ENST00000439211 CIITAP33076 1130 aa16.55■□□□□ 0.24
DHFR-201ENST00000439211 YARSP54577 528 aaKnown RBP16.55■□□□□ 0.24
DHFR-201ENST00000439211 KIF22Q14807 665 aa16.55■□□□□ 0.24
DHFR-201ENST00000439211 LIN9Q5TKA1 542 aa16.55■□□□□ 0.24
DHFR-201ENST00000439211 NRG4Q8WWG1 115 aa16.55■□□□□ 0.24
DHFR-201ENST00000439211 MRPL1Q9BYD6 325 aaKnown RBP16.55■□□□□ 0.24
DHFR-201ENST00000439211 ZHX2Q9Y6X8 837 aa16.55■□□□□ 0.24
DHFR-201ENST00000439211 UMODL1Q5DID0 1318 aa16.55■□□□□ 0.24
DHFR-201ENST00000439211 CDH16O75309 829 aa16.55■□□□□ 0.24
DHFR-201ENST00000439211 SPDYCQ5MJ68 293 aa16.55■□□□□ 0.24
DHFR-201ENST00000439211 ARHGEF16Q5VV41 709 aa16.55■□□□□ 0.24
DHFR-201ENST00000439211 SH3BP5LQ7L8J4 393 aa16.55■□□□□ 0.24
DHFR-201ENST00000439211 NOP9Q86U38 636 aaKnown RBP16.55■□□□□ 0.24
DHFR-201ENST00000439211 CCDC28BQ9BUN5 200 aa16.55■□□□□ 0.24
DHFR-201ENST00000439211 OXCT2Q9BYC2 517 aaPredicted RBP16.55■□□□□ 0.24
DHFR-201ENST00000439211 SUN2Q9UH99 717 aa16.55■□□□□ 0.24
DHFR-201ENST00000439211 RPL26L1Q9UNX3 145 aaKnown RBP16.55■□□□□ 0.24
DHFR-201ENST00000439211 HTR3EA5X5Y0 456 aa16.54■□□□□ 0.24
DHFR-201ENST00000439211 DCUN1D2Q6PH85 259 aa16.54■□□□□ 0.24
DHFR-201ENST00000439211 TRMT10CQ7L0Y3 403 aaKnown RBP16.54■□□□□ 0.24
DHFR-201ENST00000439211 TBC1D23Q9NUY8 699 aa16.54■□□□□ 0.24
DHFR-201ENST00000439211 SCINQ9Y6U3 715 aa16.54■□□□□ 0.24
DHFR-201ENST00000439211 CYP1A1P04798 512 aaPredicted RBP16.54■□□□□ 0.24
DHFR-201ENST00000439211 ANPEPP15144 967 aa16.54■□□□□ 0.24
DHFR-201ENST00000439211 LIG4P49917 911 aa16.54■□□□□ 0.24
DHFR-201ENST00000439211 SLC27A3Q5K4L6 730 aa16.54■□□□□ 0.24
DHFR-201ENST00000439211 ZSWIM2Q8NEG5 633 aa16.54■□□□□ 0.24
DHFR-201ENST00000439211 DQX1Q8TE96 717 aaKnown RBP16.54■□□□□ 0.24
DHFR-201ENST00000439211 MAML1Q92585 1016 aa16.54■□□□□ 0.24
DHFR-201ENST00000439211 ANKFY1Q9P2R3 1169 aa16.54■□□□□ 0.24
DHFR-201ENST00000439211 STXBP5LQ9Y2K9 1186 aa16.54■□□□□ 0.24
DHFR-201ENST00000439211 TMEM221A6NGB7 291 aa16.54■□□□□ 0.24
DHFR-201ENST00000439211 GSC2O15499 205 aa16.54■□□□□ 0.24
DHFR-201ENST00000439211 OAS1P00973 400 aaKnown RBP16.54■□□□□ 0.24
DHFR-201ENST00000439211 RFX1P22670 979 aa16.54■□□□□ 0.24
DHFR-201ENST00000439211 PIK3CAP42336 1068 aa16.54■□□□□ 0.24
DHFR-201ENST00000439211 HALP42357 657 aa16.54■□□□□ 0.24
DHFR-201ENST00000439211 NOVP48745 357 aa16.54■□□□□ 0.24
DHFR-201ENST00000439211 SOX10P56693 466 aa16.54■□□□□ 0.24
DHFR-201ENST00000439211 NOP14P78316 857 aaKnown RBP16.54■□□□□ 0.24
DHFR-201ENST00000439211 FBXL13Q8NEE6 735 aa16.54■□□□□ 0.24
DHFR-201ENST00000439211 TMEM117Q9H0C3 514 aa16.54■□□□□ 0.24
DHFR-201ENST00000439211 EBF3Q9H4W6 596 aa16.54■□□□□ 0.24
DHFR-201ENST00000439211 WRAP73Q9P2S5 460 aaPredicted RBP16.54■□□□□ 0.24
DHFR-201ENST00000439211 PPARGC1AQ9UBK2 798 aaKnown RBP16.54■□□□□ 0.24
DHFR-201ENST00000439211 TMED5Q9Y3A6 229 aa16.54■□□□□ 0.24
DHFR-201ENST00000439211 ZBED4O75132 1171 aa16.53■□□□□ 0.24
DHFR-201ENST00000439211 S100BP04271 92 aaPredicted RBP16.53■□□□□ 0.24
DHFR-201ENST00000439211 KRT81Q14533 505 aa16.53■□□□□ 0.24
DHFR-201ENST00000439211 LRRC6Q86X45 466 aa16.53■□□□□ 0.24
DHFR-201ENST00000439211 GMCL1P1Q8NEA9 526 aa16.53■□□□□ 0.24
DHFR-201ENST00000439211 GRK7Q8WTQ7 553 aa16.53■□□□□ 0.24
DHFR-201ENST00000439211 USP6NLQ92738 828 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms